RNA–Protein interactions for RNA: ENST00000598178.1

LTBP4-221, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-221ENST00000598178 ADAMTS2O95450 1211 aa18.65■□□□□ 0.58
LTBP4-221ENST00000598178 USP21Q9UK80 565 aa18.65■□□□□ 0.58
LTBP4-221ENST00000598178 ATRNO75882 1429 aa18.64■□□□□ 0.57
LTBP4-221ENST00000598178 PRAG1Q86YV5 1406 aa18.64■□□□□ 0.57
LTBP4-221ENST00000598178 CCDC144AA2RUR9 1427 aa18.6■□□□□ 0.57
LTBP4-221ENST00000598178 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
LTBP4-221ENST00000598178 VGFO15240 615 aaPredicted RBP18.59■□□□□ 0.57
LTBP4-221ENST00000598178 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
LTBP4-221ENST00000598178 MYOM2P54296 1465 aa18.58■□□□□ 0.57
LTBP4-221ENST00000598178 ORAI2Q96SN7 254 aa18.58■□□□□ 0.56
LTBP4-221ENST00000598178 PPLO60437 1756 aa18.57■□□□□ 0.56
LTBP4-221ENST00000598178 BCL9LQ86UU0 1499 aa18.57■□□□□ 0.56
LTBP4-221ENST00000598178 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
LTBP4-221ENST00000598178 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.55■□□□□ 0.56
LTBP4-221ENST00000598178 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
LTBP4-221ENST00000598178 PXDNQ92626 1479 aa18.52■□□□□ 0.56
LTBP4-221ENST00000598178 NPHP3Q7Z494 1330 aa18.52■□□□□ 0.56
LTBP4-221ENST00000598178 GJD4Q96KN9 370 aaPredicted RBP18.52■□□□□ 0.56
LTBP4-221ENST00000598178 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
LTBP4-221ENST00000598178 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
LTBP4-221ENST00000598178 IFT172Q9UG01 1749 aa18.49■□□□□ 0.55
LTBP4-221ENST00000598178 ANKRD30BQ9BXX2 1392 aa18.48■□□□□ 0.55
LTBP4-221ENST00000598178 LRP5O75197 1615 aa18.46■□□□□ 0.55
LTBP4-221ENST00000598178 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
LTBP4-221ENST00000598178 SLIT2O94813 1529 aa18.46■□□□□ 0.55
LTBP4-221ENST00000598178 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
LTBP4-221ENST00000598178 GLI3P10071 1580 aa18.46■□□□□ 0.55
LTBP4-221ENST00000598178 RAB3GAP2Q9H2M9 1393 aa18.45■□□□□ 0.54
LTBP4-221ENST00000598178 ESCO1Q5FWF5 840 aa18.45■□□□□ 0.54
LTBP4-221ENST00000598178 UNC5CLQ8IV45 518 aa18.44■□□□□ 0.54
LTBP4-221ENST00000598178 RALGAPBQ86X10 1494 aa18.44■□□□□ 0.54
LTBP4-221ENST00000598178 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
LTBP4-221ENST00000598178 RGL3Q3MIN7 710 aa18.43■□□□□ 0.54
LTBP4-221ENST00000598178 FOXO3O43524 673 aa18.42■□□□□ 0.54
LTBP4-221ENST00000598178 TECPR2O15040 1411 aa18.4■□□□□ 0.54
LTBP4-221ENST00000598178 KNDC1Q76NI1 1749 aa18.4■□□□□ 0.54
LTBP4-221ENST00000598178 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
LTBP4-221ENST00000598178 ONECUT3O60422 494 aaPredicted RBP18.39■□□□□ 0.53
LTBP4-221ENST00000598178 ADGRF5Q8IZF2 1346 aa18.39■□□□□ 0.53
LTBP4-221ENST00000598178 PIK3C2GO75747 1445 aa18.39■□□□□ 0.53
LTBP4-221ENST00000598178 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
LTBP4-221ENST00000598178 NWD2Q9ULI1 1742 aa18.38■□□□□ 0.53
LTBP4-221ENST00000598178 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
LTBP4-221ENST00000598178 SF3B2Q13435 895 aaKnown RBP18.36■□□□□ 0.53
LTBP4-221ENST00000598178 DEFB132Q7Z7B7 95 aa18.36■□□□□ 0.53
LTBP4-221ENST00000598178 FMN2Q9NZ56 1722 aa18.35■□□□□ 0.53
LTBP4-221ENST00000598178 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
LTBP4-221ENST00000598178 VPS72Q15906 364 aa18.35■□□□□ 0.53
LTBP4-221ENST00000598178 SEPT12Q8IYM1 358 aa18.34■□□□□ 0.53
LTBP4-221ENST00000598178 ABCC11Q96J66 1382 aa18.33■□□□□ 0.53
LTBP4-221ENST00000598178 PLCH1Q4KWH8 1693 aa18.32■□□□□ 0.52
LTBP4-221ENST00000598178 HRCP23327 699 aa18.32■□□□□ 0.52
LTBP4-221ENST00000598178 STK26Q9P289 416 aa18.32■□□□□ 0.52
LTBP4-221ENST00000598178 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
LTBP4-221ENST00000598178 YTHDC2Q9H6S0 1430 aaKnown RBP18.32■□□□□ 0.52
LTBP4-221ENST00000598178 KRT27Q7Z3Y8 459 aa18.3■□□□□ 0.52
LTBP4-221ENST00000598178 DHX57Q6P158 1386 aaKnown RBP18.3■□□□□ 0.52
LTBP4-221ENST00000598178 KRT28Q7Z3Y7 464 aa18.29■□□□□ 0.52
LTBP4-221ENST00000598178 WAPLQ7Z5K2 1190 aa18.29■□□□□ 0.52
LTBP4-221ENST00000598178 TNS3Q68CZ2 1445 aa18.29■□□□□ 0.52
LTBP4-221ENST00000598178 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
LTBP4-221ENST00000598178 NUTM2FA1L443 756 aa18.27■□□□□ 0.52
LTBP4-221ENST00000598178 BAG6P46379 1132 aa18.27■□□□□ 0.52
LTBP4-221ENST00000598178 TMEM132EQ6IEE7 984 aa18.27■□□□□ 0.52
LTBP4-221ENST00000598178 SIRT1Q96EB6 747 aa18.27■□□□□ 0.52
LTBP4-221ENST00000598178 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
LTBP4-221ENST00000598178 PSME1Q06323 249 aa18.26■□□□□ 0.51
LTBP4-221ENST00000598178 RGPD8O14715 1765 aaPredicted RBP18.26■□□□□ 0.51
LTBP4-221ENST00000598178 SBNO1A3KN83 1393 aa18.26■□□□□ 0.51
LTBP4-221ENST00000598178 ARHGEF10O15013 1369 aa18.25■□□□□ 0.51
LTBP4-221ENST00000598178 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
LTBP4-221ENST00000598178 RGPD1P0DJD0 1748 aa18.24■□□□□ 0.51
LTBP4-221ENST00000598178 STAC3Q96MF2 364 aa18.24■□□□□ 0.51
LTBP4-221ENST00000598178 NRAPQ86VF7 1730 aa18.23■□□□□ 0.51
LTBP4-221ENST00000598178 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
LTBP4-221ENST00000598178 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
LTBP4-221ENST00000598178 DLC1Q96QB1 1528 aa18.23■□□□□ 0.51
LTBP4-221ENST00000598178 PHF8Q9UPP1 1060 aa18.22■□□□□ 0.51
LTBP4-221ENST00000598178 DISP2A7MBM2 1401 aa18.22■□□□□ 0.51
LTBP4-221ENST00000598178 PSDA5PKW4 1024 aaPredicted RBP18.21■□□□□ 0.51
LTBP4-221ENST00000598178 CABLES1Q8TDN4 633 aa18.21■□□□□ 0.51
LTBP4-221ENST00000598178 CCDC9Q9Y3X0 531 aaKnown RBP18.21■□□□□ 0.51
LTBP4-221ENST00000598178 FAM83GA6ND36 823 aa18.2■□□□□ 0.5
LTBP4-221ENST00000598178 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
LTBP4-221ENST00000598178 POGKQ9P215 609 aa18.19■□□□□ 0.5
LTBP4-221ENST00000598178 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
LTBP4-221ENST00000598178 COL14A1Q05707 1796 aaKnown RBP18.18■□□□□ 0.5
LTBP4-221ENST00000598178 KDM2AQ9Y2K7 1162 aa18.18■□□□□ 0.5
LTBP4-221ENST00000598178 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
LTBP4-221ENST00000598178 PRAM1Q96QH2 718 aa18.17■□□□□ 0.5
LTBP4-221ENST00000598178 TNS1Q9HBL0 1735 aaKnown RBP18.17■□□□□ 0.5
LTBP4-221ENST00000598178 EIF3AQ14152 1382 aaKnown RBP18.17■□□□□ 0.5
LTBP4-221ENST00000598178 TRPM3Q9HCF6 1732 aaPredicted RBP18.16■□□□□ 0.5
LTBP4-221ENST00000598178 EN1Q05925 392 aaPredicted RBP18.16■□□□□ 0.5
LTBP4-221ENST00000598178 FAM98CQ17RN3 349 aaKnown RBP18.16■□□□□ 0.5
LTBP4-221ENST00000598178 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
LTBP4-221ENST00000598178 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
LTBP4-221ENST00000598178 ALS2Q96Q42 1657 aa18.15■□□□□ 0.5
LTBP4-221ENST00000598178 SAFB2Q14151 953 aaKnown RBP eCLIP18.14■□□□□ 0.49
LTBP4-221ENST00000598178 BTG4Q9NY30 223 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms