RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, human

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYMPK-208	ENST00000598059	CDC42BPG	Q6DT37	1551 aa		31.6	■■■□□ 2.65
SYMPK-208	ENST00000598059	SOS2	Q07890	1332 aa	Predicted RBP	31.58	■■■□□ 2.65
SYMPK-208	ENST00000598059	TMEM132E	Q6IEE7	984 aa		31.58	■■■□□ 2.65
SYMPK-208	ENST00000598059	ABCC11	Q96J66	1382 aa		31.57	■■■□□ 2.64
SYMPK-208	ENST00000598059	WAPL	Q7Z5K2	1190 aa		31.57	■■■□□ 2.64
SYMPK-208	ENST00000598059	KNDC1	Q76NI1	1749 aa		31.56	■■■□□ 2.64
SYMPK-208	ENST00000598059	AFF2	P51816	1311 aa		31.53	■■■□□ 2.64
SYMPK-208	ENST00000598059	NRXN1	Q9ULB1	1477 aa		31.52	■■■□□ 2.64
SYMPK-208	ENST00000598059	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.51	■■■□□ 2.64
SYMPK-208	ENST00000598059	ESCO1	Q5FWF5	840 aa		31.51	■■■□□ 2.63
SYMPK-208	ENST00000598059	PLEKHH1	Q9ULM0	1364 aa		31.51	■■■□□ 2.63
SYMPK-208	ENST00000598059	C14orf93	Q9H972	538 aa	Known RBP	31.5	■■■□□ 2.63
SYMPK-208	ENST00000598059	MYOM2	P54296	1465 aa		31.49	■■■□□ 2.63
SYMPK-208	ENST00000598059	RXRB	P28702	533 aa		31.49	■■■□□ 2.63
SYMPK-208	ENST00000598059	C8orf37	Q96NL8	207 aa		31.49	■■■□□ 2.63
SYMPK-208	ENST00000598059	NPHP3	Q7Z494	1330 aa		31.47	■■■□□ 2.63
SYMPK-208	ENST00000598059	CFAP70	Q5T0N1	1121 aa		31.45	■■■□□ 2.63
SYMPK-208	ENST00000598059	NUTM2F	A1L443	756 aa		31.44	■■■□□ 2.62
SYMPK-208	ENST00000598059	ADAMTS2	O95450	1211 aa		31.44	■■■□□ 2.62
SYMPK-208	ENST00000598059	SIRT1	Q96EB6	747 aa		31.44	■■■□□ 2.62
SYMPK-208	ENST00000598059	PXDN	Q92626	1479 aa		31.43	■■■□□ 2.62
SYMPK-208	ENST00000598059	FOXO3	O43524	673 aa		31.42	■■■□□ 2.62
SYMPK-208	ENST00000598059	DHX57	Q6P158	1386 aa	Known RBP	31.42	■■■□□ 2.62
SYMPK-208	ENST00000598059	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.42	■■■□□ 2.62
SYMPK-208	ENST00000598059	FMN2	Q9NZ56	1722 aa		31.41	■■■□□ 2.62
SYMPK-208	ENST00000598059	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.41	■■■□□ 2.62
SYMPK-208	ENST00000598059	NGLY1	Q96IV0	654 aa		31.4	■■■□□ 2.62
SYMPK-208	ENST00000598059	QTRT2	Q9H974	415 aa	Known RBP	31.39	■■■□□ 2.62
SYMPK-208	ENST00000598059	TRIM26	Q12899	539 aa	Predicted RBP	31.38	■■■□□ 2.61
SYMPK-208	ENST00000598059	HRC	P23327	699 aa		31.37	■■■□□ 2.61
SYMPK-208	ENST00000598059	XPC	Q01831	940 aa	Predicted RBP	31.37	■■■□□ 2.61
SYMPK-208	ENST00000598059	RBM6	P78332	1123 aa	Known RBP	31.34	■■■□□ 2.61
SYMPK-208	ENST00000598059	KIF1A	Q12756	1690 aa		31.32	■■■□□ 2.6
SYMPK-208	ENST00000598059	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.32	■■■□□ 2.6
SYMPK-208	ENST00000598059	PRAM1	Q96QH2	718 aa		31.32	■■■□□ 2.6
SYMPK-208	ENST00000598059	RGPD8	O14715	1765 aa	Predicted RBP	31.32	■■■□□ 2.6
SYMPK-208	ENST00000598059	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.3	■■■□□ 2.6
SYMPK-208	ENST00000598059	USP21	Q9UK80	565 aa		31.3	■■■□□ 2.6
SYMPK-208	ENST00000598059	ADGRB1	O14514	1584 aa		31.3	■■■□□ 2.6
SYMPK-208	ENST00000598059	DLC1	Q96QB1	1528 aa		31.29	■■■□□ 2.6
SYMPK-208	ENST00000598059	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.29	■■■□□ 2.6
SYMPK-208	ENST00000598059	RGS12	O14924	1447 aa		31.29	■■■□□ 2.6
SYMPK-208	ENST00000598059	DCAF11	Q8TEB1	546 aa		31.28	■■■□□ 2.6
SYMPK-208	ENST00000598059	KDM2A	Q9Y2K7	1162 aa		31.27	■■■□□ 2.6
SYMPK-208	ENST00000598059	MARF1	Q9Y4F3	1742 aa	Known RBP	31.26	■■■□□ 2.59
SYMPK-208	ENST00000598059	POGK	Q9P215	609 aa		31.25	■■■□□ 2.59
SYMPK-208	ENST00000598059	SPATA31A3	Q5VYP0	1347 aa		31.24	■■■□□ 2.59
SYMPK-208	ENST00000598059	TRPC5	Q9UL62	973 aa	Predicted RBP	31.24	■■■□□ 2.59
SYMPK-208	ENST00000598059	PHF8	Q9UPP1	1060 aa		31.24	■■■□□ 2.59
SYMPK-208	ENST00000598059	KRT28	Q7Z3Y7	464 aa		31.23	■■■□□ 2.59
SYMPK-208	ENST00000598059	STAC3	Q96MF2	364 aa		31.23	■■■□□ 2.59
SYMPK-208	ENST00000598059	TRAK1	Q9UPV9	953 aa		31.21	■■■□□ 2.59
SYMPK-208	ENST00000598059	ATRN	O75882	1429 aa		31.2	■■■□□ 2.59
SYMPK-208	ENST00000598059	ADGRB2	O60241	1585 aa		31.2	■■■□□ 2.58
SYMPK-208	ENST00000598059	EP400	Q96L91	3159 aa		31.19	■■■□□ 2.58
SYMPK-208	ENST00000598059	BCL9L	Q86UU0	1499 aa		31.18	■■■□□ 2.58
SYMPK-208	ENST00000598059	USP32	Q8NFA0	1604 aa		31.17	■■■□□ 2.58
SYMPK-208	ENST00000598059	ANKAR	Q7Z5J8	1434 aa		31.17	■■■□□ 2.58
SYMPK-208	ENST00000598059	PSME1	Q06323	249 aa		31.16	■■■□□ 2.58
SYMPK-208	ENST00000598059	TNS3	Q68CZ2	1445 aa		31.15	■■■□□ 2.58
SYMPK-208	ENST00000598059	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.14	■■■□□ 2.58
SYMPK-208	ENST00000598059	SBNO1	A3KN83	1393 aa		31.12	■■■□□ 2.57
SYMPK-208	ENST00000598059	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.11	■■■□□ 2.57
SYMPK-208	ENST00000598059	PMFBP1	Q8TBY8	1022 aa		31.11	■■■□□ 2.57
SYMPK-208	ENST00000598059	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.09	■■■□□ 2.57
SYMPK-208	ENST00000598059	SLIT2	O94813	1529 aa		31.08	■■■□□ 2.57
SYMPK-208	ENST00000598059	EIF3A	Q14152	1382 aa	Known RBP	31.07	■■■□□ 2.56
SYMPK-208	ENST00000598059	PCGF6	Q9BYE7	350 aa		31.07	■■■□□ 2.56
SYMPK-208	ENST00000598059	WASL	O00401	505 aa	Predicted RBP	31.06	■■■□□ 2.56
SYMPK-208	ENST00000598059	CABLES1	Q8TDN4	633 aa		31.06	■■■□□ 2.56
SYMPK-208	ENST00000598059	GJD4	Q96KN9	370 aa	Predicted RBP	31.06	■■■□□ 2.56
SYMPK-208	ENST00000598059	TULP4	Q9NRJ4	1543 aa		31.06	■■■□□ 2.56
SYMPK-208	ENST00000598059	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.06	■■■□□ 2.56
SYMPK-208	ENST00000598059	ARHGEF10	O15013	1369 aa		31.05	■■■□□ 2.56
SYMPK-208	ENST00000598059	PRR36	Q9H6K5	1346 aa		31.05	■■■□□ 2.56
SYMPK-208	ENST00000598059	LMOD2	Q6P5Q4	547 aa		31.05	■■■□□ 2.56
SYMPK-208	ENST00000598059	UNC5CL	Q8IV45	518 aa		31.05	■■■□□ 2.56
SYMPK-208	ENST00000598059	ATAD2	Q6PL18	1390 aa		31.05	■■■□□ 2.56
SYMPK-208	ENST00000598059	HAP1	P54257	671 aa	Predicted RBP	31.04	■■■□□ 2.56
SYMPK-208	ENST00000598059	ABCA3	Q99758	1704 aa		31.03	■■■□□ 2.56
SYMPK-208	ENST00000598059	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.01	■■■□□ 2.56
SYMPK-208	ENST00000598059	PLEKHG5	O94827	1062 aa		31.01	■■■□□ 2.55
SYMPK-208	ENST00000598059	GPRASP1	Q5JY77	1395 aa		30.99	■■■□□ 2.55
SYMPK-208	ENST00000598059	SRCAP	Q6ZRS2	3230 aa		30.99	■■■□□ 2.55
SYMPK-208	ENST00000598059	KIAA1210	Q9ULL0	1709 aa		30.98	■■■□□ 2.55
SYMPK-208	ENST00000598059	RALGAPB	Q86X10	1494 aa		30.98	■■■□□ 2.55
SYMPK-208	ENST00000598059	GLI3	P10071	1580 aa		30.97	■■■□□ 2.55
SYMPK-208	ENST00000598059	ALS2	Q96Q42	1657 aa		30.97	■■■□□ 2.55
SYMPK-208	ENST00000598059	PLCH1	Q4KWH8	1693 aa		30.96	■■■□□ 2.55
SYMPK-208	ENST00000598059	NWD2	Q9ULI1	1742 aa		30.95	■■■□□ 2.55
SYMPK-208	ENST00000598059	NGDN	Q8NEJ9	315 aa	Known RBP	30.93	■■■□□ 2.54
SYMPK-208	ENST00000598059	ATP7B	P35670	1465 aa		30.93	■■■□□ 2.54
SYMPK-208	ENST00000598059	ITSN1	Q15811	1721 aa		30.93	■■■□□ 2.54
SYMPK-208	ENST00000598059	FAM83G	A6ND36	823 aa		30.91	■■■□□ 2.54
SYMPK-208	ENST00000598059	VPS72	Q15906	364 aa		30.91	■■■□□ 2.54
SYMPK-208	ENST00000598059	NUDT16	Q96DE0	195 aa	Known RBP	30.91	■■■□□ 2.54
SYMPK-208	ENST00000598059	NBPF1	Q3BBV0	1214 aa		30.9	■■■□□ 2.54
SYMPK-208	ENST00000598059	CDK19	Q9BWU1	502 aa		30.89	■■■□□ 2.54
SYMPK-208	ENST00000598059	PAK3	O75914	559 aa	Predicted RBP	30.86	■■■□□ 2.53
SYMPK-208	ENST00000598059	BRWD3	Q6RI45	1802 aa		30.86	■■■□□ 2.53

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms