RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 KIF1AQ12756 1690 aa18.12■□□□□ 0.49
SOX2-OT-228ENST00000597828 MPHOSPH9Q99550 1183 aa18.12■□□□□ 0.49
SOX2-OT-228ENST00000597828 TECPR2O15040 1411 aa18.12■□□□□ 0.49
SOX2-OT-228ENST00000597828 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
SOX2-OT-228ENST00000597828 RGS12O14924 1447 aa18.11■□□□□ 0.49
SOX2-OT-228ENST00000597828 CDK12Q9NYV4 1490 aaPredicted RBP18.11■□□□□ 0.49
SOX2-OT-228ENST00000597828 ABCA3Q99758 1704 aa18.11■□□□□ 0.49
SOX2-OT-228ENST00000597828 PXDNQ92626 1479 aa18.1■□□□□ 0.49
SOX2-OT-228ENST00000597828 PLEKHH1Q9ULM0 1364 aa18.1■□□□□ 0.49
SOX2-OT-228ENST00000597828 SOS2Q07890 1332 aaPredicted RBP18.1■□□□□ 0.49
SOX2-OT-228ENST00000597828 RXRBP28702 533 aa18.08■□□□□ 0.48
SOX2-OT-228ENST00000597828 STK26Q9P289 416 aa18.08■□□□□ 0.48
SOX2-OT-228ENST00000597828 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.08■□□□□ 0.48
SOX2-OT-228ENST00000597828 LRPPRCP42704 1394 aaKnown RBP18.07■□□□□ 0.48
SOX2-OT-228ENST00000597828 ANKRD30BQ9BXX2 1392 aa18.07■□□□□ 0.48
SOX2-OT-228ENST00000597828 ADAMTS2O95450 1211 aa18.07■□□□□ 0.48
SOX2-OT-228ENST00000597828 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
SOX2-OT-228ENST00000597828 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
SOX2-OT-228ENST00000597828 USP32Q8NFA0 1604 aa18.06■□□□□ 0.48
SOX2-OT-228ENST00000597828 UPF1Q92900 1129 aaKnown RBP eCLIP18.06■□□□□ 0.48
SOX2-OT-228ENST00000597828 NRXN1Q9ULB1 1477 aa18.06■□□□□ 0.48
SOX2-OT-228ENST00000597828 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
SOX2-OT-228ENST00000597828 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
SOX2-OT-228ENST00000597828 NUTM2FA1L443 756 aa18.05■□□□□ 0.48
SOX2-OT-228ENST00000597828 MYOM2P54296 1465 aa18.05■□□□□ 0.48
SOX2-OT-228ENST00000597828 PLCH1Q4KWH8 1693 aa18.04■□□□□ 0.48
SOX2-OT-228ENST00000597828 XPCQ01831 940 aaPredicted RBP18.04■□□□□ 0.48
SOX2-OT-228ENST00000597828 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
SOX2-OT-228ENST00000597828 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
SOX2-OT-228ENST00000597828 RAB3GAP2Q9H2M9 1393 aa18.02■□□□□ 0.47
SOX2-OT-228ENST00000597828 NGLY1Q96IV0 654 aa18.01■□□□□ 0.47
SOX2-OT-228ENST00000597828 QTRT2Q9H974 415 aaKnown RBP18.01■□□□□ 0.47
SOX2-OT-228ENST00000597828 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
SOX2-OT-228ENST00000597828 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
SOX2-OT-228ENST00000597828 TRPM3Q9HCF6 1732 aaPredicted RBP17.99■□□□□ 0.47
SOX2-OT-228ENST00000597828 FOXO3O43524 673 aa17.99■□□□□ 0.47
SOX2-OT-228ENST00000597828 RBM6P78332 1123 aaKnown RBP17.99■□□□□ 0.47
SOX2-OT-228ENST00000597828 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
SOX2-OT-228ENST00000597828 ADGRB1O14514 1584 aa17.98■□□□□ 0.47
SOX2-OT-228ENST00000597828 ATRNO75882 1429 aa17.98■□□□□ 0.47
SOX2-OT-228ENST00000597828 USP21Q9UK80 565 aa17.97■□□□□ 0.47
SOX2-OT-228ENST00000597828 DLC1Q96QB1 1528 aa17.97■□□□□ 0.47
SOX2-OT-228ENST00000597828 GLI3P10071 1580 aa17.96■□□□□ 0.47
SOX2-OT-228ENST00000597828 NWD2Q9ULI1 1742 aa17.96■□□□□ 0.47
SOX2-OT-228ENST00000597828 CFAP70Q5T0N1 1121 aa17.96■□□□□ 0.47
SOX2-OT-228ENST00000597828 CRYBG1Q9Y4K1 1723 aa17.95■□□□□ 0.46
SOX2-OT-228ENST00000597828 C14orf93Q9H972 538 aaKnown RBP17.95■□□□□ 0.46
SOX2-OT-228ENST00000597828 ALS2Q96Q42 1657 aa17.95■□□□□ 0.46
SOX2-OT-228ENST00000597828 EP400Q96L91 3159 aa17.95■□□□□ 0.46
SOX2-OT-228ENST00000597828 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
SOX2-OT-228ENST00000597828 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
SOX2-OT-228ENST00000597828 NRAPQ86VF7 1730 aa17.93■□□□□ 0.46
SOX2-OT-228ENST00000597828 SAFB2Q14151 953 aaKnown RBP eCLIP17.93■□□□□ 0.46
SOX2-OT-228ENST00000597828 FNBP4Q8N3X1 1017 aaPredicted RBP17.93■□□□□ 0.46
SOX2-OT-228ENST00000597828 DHX57Q6P158 1386 aaKnown RBP17.91■□□□□ 0.46
SOX2-OT-228ENST00000597828 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
SOX2-OT-228ENST00000597828 TNS3Q68CZ2 1445 aa17.9■□□□□ 0.46
SOX2-OT-228ENST00000597828 SPATA31A3Q5VYP0 1347 aa17.9■□□□□ 0.46
SOX2-OT-228ENST00000597828 SLIT2O94813 1529 aa17.89■□□□□ 0.45
SOX2-OT-228ENST00000597828 PRAM1Q96QH2 718 aa17.89■□□□□ 0.45
SOX2-OT-228ENST00000597828 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 SIRT1Q96EB6 747 aa17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 PHF8Q9UPP1 1060 aa17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 ACIN1Q9UKV3 1341 aaKnown RBP17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 ATAD2Q6PL18 1390 aa17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 TOPAZ1Q8N9V7 1692 aa17.87■□□□□ 0.45
SOX2-OT-228ENST00000597828 KIAA1210Q9ULL0 1709 aa17.86■□□□□ 0.45
SOX2-OT-228ENST00000597828 RALGAPBQ86X10 1494 aa17.86■□□□□ 0.45
SOX2-OT-228ENST00000597828 TULP4Q9NRJ4 1543 aa17.86■□□□□ 0.45
SOX2-OT-228ENST00000597828 ANKARQ7Z5J8 1434 aa17.85■□□□□ 0.45
SOX2-OT-228ENST00000597828 PHRF1Q9P1Y6 1649 aaKnown RBP17.85■□□□□ 0.45
SOX2-OT-228ENST00000597828 CABLES1Q8TDN4 633 aa17.84■□□□□ 0.45
SOX2-OT-228ENST00000597828 TRAK1Q9UPV9 953 aa17.84■□□□□ 0.45
SOX2-OT-228ENST00000597828 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
SOX2-OT-228ENST00000597828 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
SOX2-OT-228ENST00000597828 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.44
SOX2-OT-228ENST00000597828 HIRIP3Q9BW71 556 aaPredicted RBP17.83■□□□□ 0.44
SOX2-OT-228ENST00000597828 POGKQ9P215 609 aa17.83■□□□□ 0.44
SOX2-OT-228ENST00000597828 SBNO1A3KN83 1393 aa17.81■□□□□ 0.44
SOX2-OT-228ENST00000597828 MINK1Q8N4C8 1332 aaPredicted RBP17.81■□□□□ 0.44
SOX2-OT-228ENST00000597828 PRR36Q9H6K5 1346 aa17.81■□□□□ 0.44
SOX2-OT-228ENST00000597828 DCAF11Q8TEB1 546 aa17.81■□□□□ 0.44
SOX2-OT-228ENST00000597828 GJD4Q96KN9 370 aaPredicted RBP17.81■□□□□ 0.44
SOX2-OT-228ENST00000597828 LMOD2Q6P5Q4 547 aa17.79■□□□□ 0.44
SOX2-OT-228ENST00000597828 UNC5CLQ8IV45 518 aa17.79■□□□□ 0.44
SOX2-OT-228ENST00000597828 QRICH2Q9H0J4 1663 aa17.78■□□□□ 0.44
SOX2-OT-228ENST00000597828 ATP7BP35670 1465 aa17.78■□□□□ 0.44
SOX2-OT-228ENST00000597828 HAP1P54257 671 aaPredicted RBP17.78■□□□□ 0.44
SOX2-OT-228ENST00000597828 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
SOX2-OT-228ENST00000597828 PSME1Q06323 249 aa17.77■□□□□ 0.44
SOX2-OT-228ENST00000597828 EIF3AQ14152 1382 aaKnown RBP17.74■□□□□ 0.43
SOX2-OT-228ENST00000597828 RGPD1P0DJD0 1748 aa17.73■□□□□ 0.43
SOX2-OT-228ENST00000597828 THSD7AQ9UPZ6 1657 aa17.73■□□□□ 0.43
SOX2-OT-228ENST00000597828 TNS1Q9HBL0 1735 aaKnown RBP17.72■□□□□ 0.43
SOX2-OT-228ENST00000597828 WASLO00401 505 aaPredicted RBP17.72■□□□□ 0.43
SOX2-OT-228ENST00000597828 GPRASP1Q5JY77 1395 aa17.71■□□□□ 0.43
SOX2-OT-228ENST00000597828 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
SOX2-OT-228ENST00000597828 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
SOX2-OT-228ENST00000597828 VPS72Q15906 364 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms