RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
IRF3-219ENST00000597636 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
IRF3-219ENST00000597636 DUOX2Q9NRD8 1548 aa19.74■□□□□ 0.75
IRF3-219ENST00000597636 PANK2Q9BZ23 570 aa19.73■□□□□ 0.75
IRF3-219ENST00000597636 GZF1Q9H116 711 aaPredicted RBP19.73■□□□□ 0.75
IRF3-219ENST00000597636 RLBP1P12271 317 aa19.73■□□□□ 0.75
IRF3-219ENST00000597636 SENP3Q9H4L4 574 aaPredicted RBP19.73■□□□□ 0.75
IRF3-219ENST00000597636 RWDD1Q9H446 243 aaPredicted RBP19.72■□□□□ 0.75
IRF3-219ENST00000597636 ZFYVE16Q7Z3T8 1539 aa19.72■□□□□ 0.75
IRF3-219ENST00000597636 SPRYD3Q8NCJ5 442 aa19.72■□□□□ 0.75
IRF3-219ENST00000597636 CHMP5Q9NZZ3 219 aa19.72■□□□□ 0.75
IRF3-219ENST00000597636 ATP7AQ04656 1500 aa19.71■□□□□ 0.75
IRF3-219ENST00000597636 NAP1L5Q96NT1 182 aaPredicted RBP19.71■□□□□ 0.75
IRF3-219ENST00000597636 CARD14Q9BXL6 1004 aa19.71■□□□□ 0.75
IRF3-219ENST00000597636 POLR3AO14802 1390 aaPredicted RBP19.71■□□□□ 0.75
IRF3-219ENST00000597636 TRAK2O60296 914 aa19.7■□□□□ 0.74
IRF3-219ENST00000597636 TRHP20396 242 aaPredicted RBP19.7■□□□□ 0.74
IRF3-219ENST00000597636 ARAP3Q8WWN8 1544 aa19.7■□□□□ 0.74
IRF3-219ENST00000597636 TNNQ9UQP3 1299 aa19.69■□□□□ 0.74
IRF3-219ENST00000597636 MRE11P49959 708 aa19.69■□□□□ 0.74
IRF3-219ENST00000597636 GLIPR1L2Q4G1C9 344 aa19.69■□□□□ 0.74
IRF3-219ENST00000597636 SLC24A1O60721 1099 aa19.68■□□□□ 0.74
IRF3-219ENST00000597636 ZNF518AQ6AHZ1 1483 aa19.68■□□□□ 0.74
IRF3-219ENST00000597636 KDM5AP29375 1690 aaKnown RBP19.68■□□□□ 0.74
IRF3-219ENST00000597636 MLECQ14165 292 aa19.68■□□□□ 0.74
IRF3-219ENST00000597636 C22orf23Q9BZE7 217 aa19.67■□□□□ 0.74
IRF3-219ENST00000597636 CFAP65Q6ZU64 1925 aaKnown RBP19.67■□□□□ 0.74
IRF3-219ENST00000597636 NEUROD2Q15784 382 aa19.66■□□□□ 0.74
IRF3-219ENST00000597636 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
IRF3-219ENST00000597636 SPHKAPQ2M3C7 1700 aa19.66■□□□□ 0.74
IRF3-219ENST00000597636 RTEL1-TNFRSF6BF6WH68 1400 aa19.66■□□□□ 0.74
IRF3-219ENST00000597636 POGZQ7Z3K3 1410 aa19.66■□□□□ 0.74
IRF3-219ENST00000597636 WDR63Q8IWG1 891 aa19.66■□□□□ 0.74
IRF3-219ENST00000597636 RUNDC1Q96C34 613 aa19.66■□□□□ 0.74
IRF3-219ENST00000597636 BCL2L13Q9BXK5 485 aa19.65■□□□□ 0.74
IRF3-219ENST00000597636 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
IRF3-219ENST00000597636 CHGAP10645 457 aaKnown RBP19.64■□□□□ 0.73
IRF3-219ENST00000597636 ERVK-7P63135 1459 aa19.64■□□□□ 0.73
IRF3-219ENST00000597636 YEATS2Q9ULM3 1422 aa19.64■□□□□ 0.73
IRF3-219ENST00000597636 TCP11L2Q8N4U5 519 aa19.64■□□□□ 0.73
IRF3-219ENST00000597636 TRPM2O94759 1503 aa19.63■□□□□ 0.73
IRF3-219ENST00000597636 KIDINS220Q9ULH0 1771 aa19.63■□□□□ 0.73
IRF3-219ENST00000597636 HSP90AA1P07900 732 aaKnown RBP19.63■□□□□ 0.73
IRF3-219ENST00000597636 CEP152O94986 1710 aa19.62■□□□□ 0.73
IRF3-219ENST00000597636 MYH16Q9H6N6 1097 aa19.62■□□□□ 0.73
IRF3-219ENST00000597636 ISY1Q9ULR0 285 aaKnown RBP19.62■□□□□ 0.73
IRF3-219ENST00000597636 MFAP1P55081 439 aaKnown RBP19.62■□□□□ 0.73
IRF3-219ENST00000597636 GRPEL1Q9HAV7 217 aa19.62■□□□□ 0.73
IRF3-219ENST00000597636 DDX11L8A8MPP1 907 aa19.62■□□□□ 0.73
IRF3-219ENST00000597636 MVPQ14764 893 aaKnown RBP19.62■□□□□ 0.73
IRF3-219ENST00000597636 RRP9O43818 475 aaKnown RBP19.61■□□□□ 0.73
IRF3-219ENST00000597636 PTPRTO14522 1441 aa19.61■□□□□ 0.73
IRF3-219ENST00000597636 HSP90AA2PQ14568 343 aaPredicted RBP19.61■□□□□ 0.73
IRF3-219ENST00000597636 ZNF692Q9BU19 519 aaPredicted RBP19.6■□□□□ 0.73
IRF3-219ENST00000597636 DIP2BQ9P265 1576 aa19.6■□□□□ 0.73
IRF3-219ENST00000597636 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
IRF3-219ENST00000597636 INO80Q9ULG1 1556 aaPredicted RBP19.59■□□□□ 0.73
IRF3-219ENST00000597636 KANK1Q14678 1352 aa19.59■□□□□ 0.73
IRF3-219ENST00000597636 CCDC27Q2M243 656 aa19.59■□□□□ 0.73
IRF3-219ENST00000597636 HSCBQ8IWL3 235 aa19.59■□□□□ 0.73
IRF3-219ENST00000597636 ESPNB1AK53 854 aa19.58■□□□□ 0.73
IRF3-219ENST00000597636 CFAP70Q5T0N1 1121 aa19.58■□□□□ 0.72
IRF3-219ENST00000597636 MORC1Q86VD1 984 aa19.58■□□□□ 0.72
IRF3-219ENST00000597636 KIAA1210Q9ULL0 1709 aa19.57■□□□□ 0.72
IRF3-219ENST00000597636 CLTCL1P53675 1640 aa19.57■□□□□ 0.72
IRF3-219ENST00000597636 ZKSCAN2Q63HK3 967 aa19.57■□□□□ 0.72
IRF3-219ENST00000597636 PKNOX2Q96KN3 472 aa19.57■□□□□ 0.72
IRF3-219ENST00000597636 NEO1Q92859 1461 aa19.57■□□□□ 0.72
IRF3-219ENST00000597636 SHPRHQ149N8 1683 aa19.57■□□□□ 0.72
IRF3-219ENST00000597636 MAP3K4Q9Y6R4 1608 aa19.56■□□□□ 0.72
IRF3-219ENST00000597636 DDIT3P35638 169 aa19.56■□□□□ 0.72
IRF3-219ENST00000597636 PLPPR3Q6T4P5 718 aa19.56■□□□□ 0.72
IRF3-219ENST00000597636 DZIP1LQ8IYY4 767 aaKnown RBP19.56■□□□□ 0.72
IRF3-219ENST00000597636 NUTM2DQ5VT03 806 aaPredicted RBP19.55■□□□□ 0.72
IRF3-219ENST00000597636 NCOA3Q9Y6Q9 1424 aa19.55■□□□□ 0.72
IRF3-219ENST00000597636 FTSJ3Q8IY81 847 aaKnown RBP19.55■□□□□ 0.72
IRF3-219ENST00000597636 HDAC1Q13547 482 aaPredicted RBP19.54■□□□□ 0.72
IRF3-219ENST00000597636 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
IRF3-219ENST00000597636 TNNT2P45379 298 aaPredicted RBP19.54■□□□□ 0.72
IRF3-219ENST00000597636 NCBP3Q53F19 620 aaKnown RBP19.53■□□□□ 0.72
IRF3-219ENST00000597636 VSIG10Q8N0Z9 540 aa19.53■□□□□ 0.72
IRF3-219ENST00000597636 NSD3Q9BZ95 1437 aa19.52■□□□□ 0.72
IRF3-219ENST00000597636 SNX21Q969T3 373 aa19.52■□□□□ 0.71
IRF3-219ENST00000597636 MLH3Q9UHC1 1453 aa19.51■□□□□ 0.71
IRF3-219ENST00000597636 HECW2Q9P2P5 1572 aa19.51■□□□□ 0.71
IRF3-219ENST00000597636 RBM25P49756 843 aaKnown RBP19.51■□□□□ 0.71
IRF3-219ENST00000597636 TRIM44Q96DX7 344 aaPredicted RBP19.51■□□□□ 0.71
IRF3-219ENST00000597636 SBNO2Q9Y2G9 1366 aa19.51■□□□□ 0.71
IRF3-219ENST00000597636 ABCA6Q8N139 1617 aa19.51■□□□□ 0.71
IRF3-219ENST00000597636 UGGT1Q9NYU2 1555 aa19.5■□□□□ 0.71
IRF3-219ENST00000597636 CT47B1P0C2W7 299 aaPredicted RBP19.5■□□□□ 0.71
IRF3-219ENST00000597636 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
IRF3-219ENST00000597636 TNPO1Q92973 898 aaKnown RBP19.5■□□□□ 0.71
IRF3-219ENST00000597636 CIZ1Q9ULV3 898 aaPredicted RBP19.5■□□□□ 0.71
IRF3-219ENST00000597636 ADGRF5Q8IZF2 1346 aa19.5■□□□□ 0.71
IRF3-219ENST00000597636 CFAP74Q9C0B2 1584 aa19.5■□□□□ 0.71
IRF3-219ENST00000597636 MTHFSP49914 203 aa19.5■□□□□ 0.71
IRF3-219ENST00000597636 ZMYND15Q9H091 742 aa19.5■□□□□ 0.71
IRF3-219ENST00000597636 GAS2L3Q86XJ1 694 aa19.49■□□□□ 0.71
IRF3-219ENST00000597636 FRMPD1Q5SYB0 1578 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms