RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
C19orf54-207ENST00000597507 CCDC125Q86Z20 511 aa24.97■■□□□ 1.59
C19orf54-207ENST00000597507 ESCO1Q5FWF5 840 aa24.95■■□□□ 1.58
C19orf54-207ENST00000597507 MARF1Q9Y4F3 1742 aaKnown RBP24.95■■□□□ 1.58
C19orf54-207ENST00000597507 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
C19orf54-207ENST00000597507 GJD4Q96KN9 370 aaPredicted RBP24.94■■□□□ 1.58
C19orf54-207ENST00000597507 NPHP3Q7Z494 1330 aa24.93■■□□□ 1.58
C19orf54-207ENST00000597507 XPCQ01831 940 aaPredicted RBP24.93■■□□□ 1.58
C19orf54-207ENST00000597507 PXDNQ92626 1479 aa24.93■■□□□ 1.58
C19orf54-207ENST00000597507 HFM1A2PYH4 1435 aa24.93■■□□□ 1.58
C19orf54-207ENST00000597507 FOXO3O43524 673 aa24.92■■□□□ 1.58
C19orf54-207ENST00000597507 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
C19orf54-207ENST00000597507 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
C19orf54-207ENST00000597507 PPLO60437 1756 aa24.85■■□□□ 1.57
C19orf54-207ENST00000597507 CDC42BPGQ6DT37 1551 aa24.85■■□□□ 1.57
C19orf54-207ENST00000597507 NUTM2FA1L443 756 aa24.85■■□□□ 1.57
C19orf54-207ENST00000597507 UNC5CLQ8IV45 518 aa24.84■■□□□ 1.57
C19orf54-207ENST00000597507 BRWD3Q6RI45 1802 aa24.84■■□□□ 1.57
C19orf54-207ENST00000597507 GLI3P10071 1580 aa24.84■■□□□ 1.57
C19orf54-207ENST00000597507 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.83■■□□□ 1.57
C19orf54-207ENST00000597507 RALGAPBQ86X10 1494 aa24.83■■□□□ 1.56
C19orf54-207ENST00000597507 BLMP54132 1417 aaPredicted RBP24.82■■□□□ 1.56
C19orf54-207ENST00000597507 WAPLQ7Z5K2 1190 aa24.82■■□□□ 1.56
C19orf54-207ENST00000597507 DEFB132Q7Z7B7 95 aa24.82■■□□□ 1.56
C19orf54-207ENST00000597507 SLIT2O94813 1529 aa24.81■■□□□ 1.56
C19orf54-207ENST00000597507 NAIPQ13075 1403 aa24.81■■□□□ 1.56
C19orf54-207ENST00000597507 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
C19orf54-207ENST00000597507 STK26Q9P289 416 aa24.79■■□□□ 1.56
C19orf54-207ENST00000597507 SPATA31A3Q5VYP0 1347 aa24.78■■□□□ 1.56
C19orf54-207ENST00000597507 ADGRF5Q8IZF2 1346 aa24.77■■□□□ 1.56
C19orf54-207ENST00000597507 SEPT12Q8IYM1 358 aa24.75■■□□□ 1.55
C19orf54-207ENST00000597507 PLEKHH1Q9ULM0 1364 aa24.75■■□□□ 1.55
C19orf54-207ENST00000597507 SLC4A1APQ9BWU0 796 aaKnown RBP24.74■■□□□ 1.55
C19orf54-207ENST00000597507 TECPR2O15040 1411 aa24.73■■□□□ 1.55
C19orf54-207ENST00000597507 KRT28Q7Z3Y7 464 aa24.73■■□□□ 1.55
C19orf54-207ENST00000597507 TMEM132EQ6IEE7 984 aa24.72■■□□□ 1.55
C19orf54-207ENST00000597507 USP32Q8NFA0 1604 aa24.72■■□□□ 1.55
C19orf54-207ENST00000597507 FMN2Q9NZ56 1722 aa24.7■■□□□ 1.54
C19orf54-207ENST00000597507 ONECUT3O60422 494 aaPredicted RBP24.7■■□□□ 1.54
C19orf54-207ENST00000597507 SF3B2Q13435 895 aaKnown RBP24.7■■□□□ 1.54
C19orf54-207ENST00000597507 VPS72Q15906 364 aa24.7■■□□□ 1.54
C19orf54-207ENST00000597507 CABLES1Q8TDN4 633 aa24.7■■□□□ 1.54
C19orf54-207ENST00000597507 ABCC11Q96J66 1382 aa24.69■■□□□ 1.54
C19orf54-207ENST00000597507 RGPD8O14715 1765 aaPredicted RBP24.69■■□□□ 1.54
C19orf54-207ENST00000597507 RRBP1Q9P2E9 1410 aaKnown RBP24.69■■□□□ 1.54
C19orf54-207ENST00000597507 RGL3Q3MIN7 710 aa24.68■■□□□ 1.54
C19orf54-207ENST00000597507 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
C19orf54-207ENST00000597507 KIF1AQ12756 1690 aa24.67■■□□□ 1.54
C19orf54-207ENST00000597507 PLEKHG5O94827 1062 aa24.67■■□□□ 1.54
C19orf54-207ENST00000597507 LRP5O75197 1615 aa24.66■■□□□ 1.54
C19orf54-207ENST00000597507 KRT27Q7Z3Y8 459 aa24.66■■□□□ 1.54
C19orf54-207ENST00000597507 HAP1P54257 671 aaPredicted RBP24.65■■□□□ 1.54
C19orf54-207ENST00000597507 KNDC1Q76NI1 1749 aa24.65■■□□□ 1.54
C19orf54-207ENST00000597507 CCDC9Q9Y3X0 531 aaKnown RBP24.64■■□□□ 1.54
C19orf54-207ENST00000597507 PLCH1Q4KWH8 1693 aa24.64■■□□□ 1.53
C19orf54-207ENST00000597507 NWD2Q9ULI1 1742 aa24.64■■□□□ 1.53
C19orf54-207ENST00000597507 PSDA5PKW4 1024 aaPredicted RBP24.63■■□□□ 1.53
C19orf54-207ENST00000597507 PHF8Q9UPP1 1060 aa24.63■■□□□ 1.53
C19orf54-207ENST00000597507 TNS3Q68CZ2 1445 aa24.62■■□□□ 1.53
C19orf54-207ENST00000597507 SPATA31E1Q6ZUB1 1445 aa24.62■■□□□ 1.53
C19orf54-207ENST00000597507 IFT172Q9UG01 1749 aa24.62■■□□□ 1.53
C19orf54-207ENST00000597507 FAM83GA6ND36 823 aa24.61■■□□□ 1.53
C19orf54-207ENST00000597507 PSME1Q06323 249 aa24.61■■□□□ 1.53
C19orf54-207ENST00000597507 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
C19orf54-207ENST00000597507 ANKRD30BQ9BXX2 1392 aa24.6■■□□□ 1.53
C19orf54-207ENST00000597507 HRCP23327 699 aa24.59■■□□□ 1.53
C19orf54-207ENST00000597507 LMOD2Q6P5Q4 547 aa24.59■■□□□ 1.53
C19orf54-207ENST00000597507 ABCA3Q99758 1704 aa24.58■■□□□ 1.53
C19orf54-207ENST00000597507 SIRT1Q96EB6 747 aa24.58■■□□□ 1.53
C19orf54-207ENST00000597507 PIK3C2GO75747 1445 aa24.58■■□□□ 1.53
C19orf54-207ENST00000597507 SBNO1A3KN83 1393 aa24.56■■□□□ 1.52
C19orf54-207ENST00000597507 BAG6P46379 1132 aa24.56■■□□□ 1.52
C19orf54-207ENST00000597507 NRXN1Q9ULB1 1477 aa24.55■■□□□ 1.52
C19orf54-207ENST00000597507 A0A0G2JS52 829 aa24.54■■□□□ 1.52
C19orf54-207ENST00000597507 MYT1Q01538 1121 aa24.54■■□□□ 1.52
C19orf54-207ENST00000597507 FAM98CQ17RN3 349 aaKnown RBP24.54■■□□□ 1.52
C19orf54-207ENST00000597507 EN1Q05925 392 aaPredicted RBP24.53■■□□□ 1.52
C19orf54-207ENST00000597507 ARHGEF10O15013 1369 aa24.53■■□□□ 1.52
C19orf54-207ENST00000597507 C14orf93Q9H972 538 aaKnown RBP24.52■■□□□ 1.52
C19orf54-207ENST00000597507 SAFB2Q14151 953 aaKnown RBP eCLIP24.51■■□□□ 1.51
C19orf54-207ENST00000597507 FAM182BQ5T319 152 aa24.51■■□□□ 1.51
C19orf54-207ENST00000597507 PMFBP1Q8TBY8 1022 aa24.51■■□□□ 1.51
C19orf54-207ENST00000597507 BTG4Q9NY30 223 aa24.51■■□□□ 1.51
C19orf54-207ENST00000597507 NRAPQ86VF7 1730 aa24.51■■□□□ 1.51
C19orf54-207ENST00000597507 CFAP70Q5T0N1 1121 aa24.49■■□□□ 1.51
C19orf54-207ENST00000597507 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
C19orf54-207ENST00000597507 MPHOSPH9Q99550 1183 aa24.48■■□□□ 1.51
C19orf54-207ENST00000597507 DHX57Q6P158 1386 aaKnown RBP24.46■■□□□ 1.51
C19orf54-207ENST00000597507 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
C19orf54-207ENST00000597507 RGPD1P0DJD0 1748 aa24.45■■□□□ 1.5
C19orf54-207ENST00000597507 TRPM3Q9HCF6 1732 aaPredicted RBP24.44■■□□□ 1.5
C19orf54-207ENST00000597507 COL14A1Q05707 1796 aaKnown RBP24.42■■□□□ 1.5
C19orf54-207ENST00000597507 SPATA31A5Q5VU36 1347 aa24.42■■□□□ 1.5
C19orf54-207ENST00000597507 SPATA31A7Q8IWB4 1347 aa24.42■■□□□ 1.5
C19orf54-207ENST00000597507 ALS2Q96Q42 1657 aa24.41■■□□□ 1.5
C19orf54-207ENST00000597507 EZH2Q15910 746 aaKnown RBP24.41■■□□□ 1.5
C19orf54-207ENST00000597507 ANKARQ7Z5J8 1434 aa24.41■■□□□ 1.5
C19orf54-207ENST00000597507 POGKQ9P215 609 aa24.4■■□□□ 1.5
C19orf54-207ENST00000597507 TNS1Q9HBL0 1735 aaKnown RBP24.39■■□□□ 1.5
C19orf54-207ENST00000597507 DISP2A7MBM2 1401 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms