RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 STK26Q9P289 416 aa22.49■■□□□ 1.19
TGFB1-202ENST00000597453 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
TGFB1-202ENST00000597453 TMEM132EQ6IEE7 984 aa22.48■■□□□ 1.19
TGFB1-202ENST00000597453 WAPLQ7Z5K2 1190 aa22.47■■□□□ 1.19
TGFB1-202ENST00000597453 SOS2Q07890 1332 aaPredicted RBP22.46■■□□□ 1.19
TGFB1-202ENST00000597453 ABCC11Q96J66 1382 aa22.46■■□□□ 1.19
TGFB1-202ENST00000597453 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
TGFB1-202ENST00000597453 NRXN1Q9ULB1 1477 aa22.46■■□□□ 1.19
TGFB1-202ENST00000597453 YTHDC2Q9H6S0 1430 aaKnown RBP22.45■■□□□ 1.18
TGFB1-202ENST00000597453 AFF2P51816 1311 aa22.44■■□□□ 1.18
TGFB1-202ENST00000597453 MYOM2P54296 1465 aa22.44■■□□□ 1.18
TGFB1-202ENST00000597453 FMN2Q9NZ56 1722 aa22.43■■□□□ 1.18
TGFB1-202ENST00000597453 ESCO1Q5FWF5 840 aa22.41■■□□□ 1.18
TGFB1-202ENST00000597453 C8orf37Q96NL8 207 aa22.41■■□□□ 1.18
TGFB1-202ENST00000597453 COL22A1Q8NFW1 1626 aaPredicted RBP22.41■■□□□ 1.18
TGFB1-202ENST00000597453 C14orf93Q9H972 538 aaKnown RBP22.4■■□□□ 1.18
TGFB1-202ENST00000597453 PXDNQ92626 1479 aa22.4■■□□□ 1.18
TGFB1-202ENST00000597453 NUTM2FA1L443 756 aa22.39■■□□□ 1.17
TGFB1-202ENST00000597453 RXRBP28702 533 aa22.39■■□□□ 1.17
TGFB1-202ENST00000597453 CFAP70Q5T0N1 1121 aa22.39■■□□□ 1.17
TGFB1-202ENST00000597453 ADAMTS2O95450 1211 aa22.38■■□□□ 1.17
TGFB1-202ENST00000597453 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
TGFB1-202ENST00000597453 RGPD8O14715 1765 aaPredicted RBP22.36■■□□□ 1.17
TGFB1-202ENST00000597453 CDK12Q9NYV4 1490 aaPredicted RBP22.35■■□□□ 1.17
TGFB1-202ENST00000597453 FOXO3O43524 673 aa22.35■■□□□ 1.17
TGFB1-202ENST00000597453 XPCQ01831 940 aaPredicted RBP22.35■■□□□ 1.17
TGFB1-202ENST00000597453 SIRT1Q96EB6 747 aa22.34■■□□□ 1.17
TGFB1-202ENST00000597453 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
TGFB1-202ENST00000597453 KIF1AQ12756 1690 aa22.33■■□□□ 1.17
TGFB1-202ENST00000597453 NGLY1Q96IV0 654 aa22.33■■□□□ 1.17
TGFB1-202ENST00000597453 ADGRB1O14514 1584 aa22.32■■□□□ 1.16
TGFB1-202ENST00000597453 MARF1Q9Y4F3 1742 aaKnown RBP22.31■■□□□ 1.16
TGFB1-202ENST00000597453 QTRT2Q9H974 415 aaKnown RBP22.31■■□□□ 1.16
TGFB1-202ENST00000597453 RGS12O14924 1447 aa22.31■■□□□ 1.16
TGFB1-202ENST00000597453 DLC1Q96QB1 1528 aa22.3■■□□□ 1.16
TGFB1-202ENST00000597453 PRAM1Q96QH2 718 aa22.29■■□□□ 1.16
TGFB1-202ENST00000597453 RBM6P78332 1123 aaKnown RBP22.28■■□□□ 1.16
TGFB1-202ENST00000597453 SAFB2Q14151 953 aaKnown RBP eCLIP22.28■■□□□ 1.16
TGFB1-202ENST00000597453 UPF1Q92900 1129 aaKnown RBP eCLIP22.28■■□□□ 1.16
TGFB1-202ENST00000597453 HRCP23327 699 aa22.26■■□□□ 1.15
TGFB1-202ENST00000597453 USP32Q8NFA0 1604 aa22.26■■□□□ 1.15
TGFB1-202ENST00000597453 ADGRB2O60241 1585 aa22.25■■□□□ 1.15
TGFB1-202ENST00000597453 FNBP4Q8N3X1 1017 aaPredicted RBP22.25■■□□□ 1.15
TGFB1-202ENST00000597453 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
TGFB1-202ENST00000597453 USP21Q9UK80 565 aa22.25■■□□□ 1.15
TGFB1-202ENST00000597453 KDM2AQ9Y2K7 1162 aa22.25■■□□□ 1.15
TGFB1-202ENST00000597453 SPATA31A3Q5VYP0 1347 aa22.24■■□□□ 1.15
TGFB1-202ENST00000597453 KRT28Q7Z3Y7 464 aa22.22■■□□□ 1.15
TGFB1-202ENST00000597453 POGKQ9P215 609 aa22.22■■□□□ 1.15
TGFB1-202ENST00000597453 PHF8Q9UPP1 1060 aa22.22■■□□□ 1.15
TGFB1-202ENST00000597453 ATRNO75882 1429 aa22.22■■□□□ 1.15
TGFB1-202ENST00000597453 TRPC5Q9UL62 973 aaPredicted RBP22.21■■□□□ 1.15
TGFB1-202ENST00000597453 TRAK1Q9UPV9 953 aa22.21■■□□□ 1.15
TGFB1-202ENST00000597453 BCL9LQ86UU0 1499 aa22.2■■□□□ 1.14
TGFB1-202ENST00000597453 ANKARQ7Z5J8 1434 aa22.19■■□□□ 1.14
TGFB1-202ENST00000597453 ARHGEF28Q8N1W1 1705 aaKnown RBP22.18■■□□□ 1.14
TGFB1-202ENST00000597453 TNS3Q68CZ2 1445 aa22.18■■□□□ 1.14
TGFB1-202ENST00000597453 ABCA3Q99758 1704 aa22.17■■□□□ 1.14
TGFB1-202ENST00000597453 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
TGFB1-202ENST00000597453 HIRIP3Q9BW71 556 aaPredicted RBP22.17■■□□□ 1.14
TGFB1-202ENST00000597453 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
TGFB1-202ENST00000597453 PMFBP1Q8TBY8 1022 aa22.15■■□□□ 1.14
TGFB1-202ENST00000597453 STAC3Q96MF2 364 aa22.15■■□□□ 1.14
TGFB1-202ENST00000597453 PSME1Q06323 249 aa22.14■■□□□ 1.13
TGFB1-202ENST00000597453 SLIT2O94813 1529 aa22.14■■□□□ 1.13
TGFB1-202ENST00000597453 TRPM3Q9HCF6 1732 aaPredicted RBP22.14■■□□□ 1.13
TGFB1-202ENST00000597453 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
TGFB1-202ENST00000597453 PRR36Q9H6K5 1346 aa22.13■■□□□ 1.13
TGFB1-202ENST00000597453 TULP4Q9NRJ4 1543 aa22.13■■□□□ 1.13
TGFB1-202ENST00000597453 CABLES1Q8TDN4 633 aa22.12■■□□□ 1.13
TGFB1-202ENST00000597453 PLCH1Q4KWH8 1693 aa22.11■■□□□ 1.13
TGFB1-202ENST00000597453 PLEKHG5O94827 1062 aa22.11■■□□□ 1.13
TGFB1-202ENST00000597453 GLI3P10071 1580 aa22.1■■□□□ 1.13
TGFB1-202ENST00000597453 KIAA1210Q9ULL0 1709 aa22.09■■□□□ 1.13
TGFB1-202ENST00000597453 WASLO00401 505 aaPredicted RBP22.09■■□□□ 1.13
TGFB1-202ENST00000597453 LMOD2Q6P5Q4 547 aa22.09■■□□□ 1.13
TGFB1-202ENST00000597453 ALS2Q96Q42 1657 aa22.09■■□□□ 1.13
TGFB1-202ENST00000597453 ARHGEF10O15013 1369 aa22.09■■□□□ 1.13
TGFB1-202ENST00000597453 EIF3AQ14152 1382 aaKnown RBP22.09■■□□□ 1.13
TGFB1-202ENST00000597453 ATAD2Q6PL18 1390 aa22.09■■□□□ 1.13
TGFB1-202ENST00000597453 UNC5CLQ8IV45 518 aa22.08■■□□□ 1.13
TGFB1-202ENST00000597453 GJD4Q96KN9 370 aaPredicted RBP22.08■■□□□ 1.13
TGFB1-202ENST00000597453 NWD2Q9ULI1 1742 aa22.07■■□□□ 1.12
TGFB1-202ENST00000597453 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
TGFB1-202ENST00000597453 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
TGFB1-202ENST00000597453 ITSN1Q15811 1721 aa22.06■■□□□ 1.12
TGFB1-202ENST00000597453 ATP7BP35670 1465 aa22.05■■□□□ 1.12
TGFB1-202ENST00000597453 EP400Q96L91 3159 aa22.05■■□□□ 1.12
TGFB1-202ENST00000597453 CRYBG1Q9Y4K1 1723 aa22.03■■□□□ 1.12
TGFB1-202ENST00000597453 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
TGFB1-202ENST00000597453 BRWD3Q6RI45 1802 aa22.03■■□□□ 1.12
TGFB1-202ENST00000597453 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
TGFB1-202ENST00000597453 NRAPQ86VF7 1730 aa22■■□□□ 1.11
TGFB1-202ENST00000597453 NBPF1Q3BBV0 1214 aa22■■□□□ 1.11
TGFB1-202ENST00000597453 FAM83GA6ND36 823 aa21.99■■□□□ 1.11
TGFB1-202ENST00000597453 NGDNQ8NEJ9 315 aaKnown RBP21.99■■□□□ 1.11
TGFB1-202ENST00000597453 NUDT16Q96DE0 195 aaKnown RBP21.99■■□□□ 1.11
TGFB1-202ENST00000597453 VPS72Q15906 364 aa21.98■■□□□ 1.11
TGFB1-202ENST00000597453 COL14A1Q05707 1796 aaKnown RBP21.97■■□□□ 1.11
TGFB1-202ENST00000597453 CDK19Q9BWU1 502 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms