RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
PDE4C-211ENST00000597360 NKTRP30414 1462 aaKnown RBP19.18■□□□□ 0.66
PDE4C-211ENST00000597360 ASXL2Q76L83 1435 aa19.18■□□□□ 0.66
PDE4C-211ENST00000597360 PRDM4Q9UKN5 801 aa19.18■□□□□ 0.66
PDE4C-211ENST00000597360 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
PDE4C-211ENST00000597360 RBM42Q9BTD8 480 aaKnown RBP19.18■□□□□ 0.66
PDE4C-211ENST00000597360 PDE4CQ08493 712 aa19.17■□□□□ 0.66
PDE4C-211ENST00000597360 WDR7Q9Y4E6 1490 aa19.17■□□□□ 0.66
PDE4C-211ENST00000597360 PTMSP20962 102 aa19.16■□□□□ 0.66
PDE4C-211ENST00000597360 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.66
PDE4C-211ENST00000597360 BLMP54132 1417 aaPredicted RBP19.16■□□□□ 0.66
PDE4C-211ENST00000597360 PRPF40AO75400 957 aaKnown RBP19.15■□□□□ 0.66
PDE4C-211ENST00000597360 ANKRD50Q9ULJ7 1429 aa19.15■□□□□ 0.66
PDE4C-211ENST00000597360 CDK11BP21127 795 aaKnown RBP19.15■□□□□ 0.66
PDE4C-211ENST00000597360 BCL11BQ9C0K0 894 aaPredicted RBP19.15■□□□□ 0.66
PDE4C-211ENST00000597360 ZMYM4Q5VZL5 1548 aa19.15■□□□□ 0.66
PDE4C-211ENST00000597360 CDC42BPBQ9Y5S2 1711 aa19.15■□□□□ 0.66
PDE4C-211ENST00000597360 WWC1Q8IX03 1113 aa19.14■□□□□ 0.66
PDE4C-211ENST00000597360 PLEKHH2Q8IVE3 1493 aa19.14■□□□□ 0.66
PDE4C-211ENST00000597360 RARSP54136 660 aaKnown RBP19.14■□□□□ 0.65
PDE4C-211ENST00000597360 DZIP1LQ8IYY4 767 aaKnown RBP19.14■□□□□ 0.65
PDE4C-211ENST00000597360 RBM27Q9P2N5 1060 aaKnown RBP19.14■□□□□ 0.65
PDE4C-211ENST00000597360 ROCK1Q13464 1354 aa19.13■□□□□ 0.65
PDE4C-211ENST00000597360 ZKSCAN2Q63HK3 967 aa19.13■□□□□ 0.65
PDE4C-211ENST00000597360 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
PDE4C-211ENST00000597360 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
PDE4C-211ENST00000597360 FGD1P98174 961 aa19.13■□□□□ 0.65
PDE4C-211ENST00000597360 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
PDE4C-211ENST00000597360 ANKRD45Q5TZF3 282 aa19.13■□□□□ 0.65
PDE4C-211ENST00000597360 JARID2Q92833 1246 aaPredicted RBP19.12■□□□□ 0.65
PDE4C-211ENST00000597360 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
PDE4C-211ENST00000597360 SPDYE4A6NLX3 237 aa19.12■□□□□ 0.65
PDE4C-211ENST00000597360 PREX2Q70Z35 1606 aa19.11■□□□□ 0.65
PDE4C-211ENST00000597360 PZPP20742 1482 aa19.11■□□□□ 0.65
PDE4C-211ENST00000597360 MTERF4Q7Z6M4 381 aaKnown RBP19.11■□□□□ 0.65
PDE4C-211ENST00000597360 KDM5CP41229 1560 aa19.11■□□□□ 0.65
PDE4C-211ENST00000597360 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
PDE4C-211ENST00000597360 CCDC144AA2RUR9 1427 aa19.1■□□□□ 0.65
PDE4C-211ENST00000597360 ARHGAP5Q13017 1502 aa19.1■□□□□ 0.65
PDE4C-211ENST00000597360 DNMT1P26358 1616 aaKnown RBP19.1■□□□□ 0.65
PDE4C-211ENST00000597360 APBB1O00213 710 aa19.1■□□□□ 0.65
PDE4C-211ENST00000597360 SMAP1Q8IYB5 467 aaPredicted RBP19.1■□□□□ 0.65
PDE4C-211ENST00000597360 TESK2Q96S53 571 aa19.1■□□□□ 0.65
PDE4C-211ENST00000597360 BAG4O95429 457 aaKnown RBP19.09■□□□□ 0.65
PDE4C-211ENST00000597360 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
PDE4C-211ENST00000597360 NOL8Q76FK4 1167 aaKnown RBP19.09■□□□□ 0.65
PDE4C-211ENST00000597360 MORC1Q86VD1 984 aa19.09■□□□□ 0.65
PDE4C-211ENST00000597360 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
PDE4C-211ENST00000597360 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
PDE4C-211ENST00000597360 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
PDE4C-211ENST00000597360 SYCE3A1L190 88 aa19.09■□□□□ 0.65
PDE4C-211ENST00000597360 K7ELQ4 463 aaPredicted RBP19.09■□□□□ 0.65
PDE4C-211ENST00000597360 RAB3GAP1Q15042 981 aa19.09■□□□□ 0.65
PDE4C-211ENST00000597360 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.65
PDE4C-211ENST00000597360 RBSNQ9H1K0 784 aa19.08■□□□□ 0.65
PDE4C-211ENST00000597360 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.65
PDE4C-211ENST00000597360 PLCH2O75038 1416 aa19.08■□□□□ 0.65
PDE4C-211ENST00000597360 U2AF1L5P0DN76 240 aaPredicted RBP19.08■□□□□ 0.64
PDE4C-211ENST00000597360 U2AF1Q01081 240 aaKnown RBP eCLIP19.08■□□□□ 0.64
PDE4C-211ENST00000597360 MYO5CQ9NQX4 1742 aa19.08■□□□□ 0.64
PDE4C-211ENST00000597360 U2SURPO15042 1029 aaKnown RBP19.08■□□□□ 0.64
PDE4C-211ENST00000597360 MVPQ14764 893 aaKnown RBP19.08■□□□□ 0.64
PDE4C-211ENST00000597360 CIZ1Q9ULV3 898 aaPredicted RBP19.08■□□□□ 0.64
PDE4C-211ENST00000597360 DYNC1I1O14576 645 aa19.07■□□□□ 0.64
PDE4C-211ENST00000597360 SASS6Q6UVJ0 657 aa19.07■□□□□ 0.64
PDE4C-211ENST00000597360 ZNF771Q7L3S4 317 aaPredicted RBP19.07■□□□□ 0.64
PDE4C-211ENST00000597360 GAS2L2Q8NHY3 880 aa19.07■□□□□ 0.64
PDE4C-211ENST00000597360 ZNF521Q96K83 1311 aa19.07■□□□□ 0.64
PDE4C-211ENST00000597360 ZNF830Q96NB3 372 aaPredicted RBP19.07■□□□□ 0.64
PDE4C-211ENST00000597360 ZSCAN23Q3MJ62 389 aa19.06■□□□□ 0.64
PDE4C-211ENST00000597360 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
PDE4C-211ENST00000597360 PPP1R9BQ96SB3 815 aa19.06■□□□□ 0.64
PDE4C-211ENST00000597360 KLHL40Q2TBA0 621 aa19.05■□□□□ 0.64
PDE4C-211ENST00000597360 CCDC39Q9UFE4 941 aa19.05■□□□□ 0.64
PDE4C-211ENST00000597360 CD2BP2O95400 341 aaKnown RBP19.05■□□□□ 0.64
PDE4C-211ENST00000597360 MBD5Q9P267 1494 aa19.04■□□□□ 0.64
PDE4C-211ENST00000597360 CHAMP1Q96JM3 812 aa19.04■□□□□ 0.64
PDE4C-211ENST00000597360 ZKSCAN5Q9Y2L8 839 aa19.04■□□□□ 0.64
PDE4C-211ENST00000597360 PPP4R3BQ5MIZ7 849 aa19.04■□□□□ 0.64
PDE4C-211ENST00000597360 C1orf115Q9H7X2 142 aa19.04■□□□□ 0.64
PDE4C-211ENST00000597360 EFCAB2Q5VUJ9 269 aa19.03■□□□□ 0.64
PDE4C-211ENST00000597360 NOL7Q9UMY1 257 aaKnown RBP19.03■□□□□ 0.64
PDE4C-211ENST00000597360 VGLL3A8MV65 326 aa19.03■□□□□ 0.64
PDE4C-211ENST00000597360 SMC5Q8IY18 1101 aa19.03■□□□□ 0.64
PDE4C-211ENST00000597360 CCDC94Q9BW85 323 aaPredicted RBP19.02■□□□□ 0.64
PDE4C-211ENST00000597360 ABCA9Q8IUA7 1624 aa19.02■□□□□ 0.63
PDE4C-211ENST00000597360 CGNQ9P2M7 1197 aaKnown RBP19.01■□□□□ 0.63
PDE4C-211ENST00000597360 SYCP2Q9BX26 1530 aa19.01■□□□□ 0.63
PDE4C-211ENST00000597360 ZNF692Q9BU19 519 aaPredicted RBP19.01■□□□□ 0.63
PDE4C-211ENST00000597360 ARHGEF12Q9NZN5 1544 aa19.01■□□□□ 0.63
PDE4C-211ENST00000597360 C17orf53Q8N3J3 647 aaPredicted RBP19■□□□□ 0.63
PDE4C-211ENST00000597360 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
PDE4C-211ENST00000597360 CHMP4BQ9H444 224 aaKnown RBP19■□□□□ 0.63
PDE4C-211ENST00000597360 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
PDE4C-211ENST00000597360 CHGAP10645 457 aaKnown RBP18.99■□□□□ 0.63
PDE4C-211ENST00000597360 EXOSC9Q06265 439 aaKnown RBP18.99■□□□□ 0.63
PDE4C-211ENST00000597360 TRMT2AQ8IZ69 625 aaKnown RBP18.99■□□□□ 0.63
PDE4C-211ENST00000597360 PLCD3Q8N3E9 789 aa18.99■□□□□ 0.63
PDE4C-211ENST00000597360 CHAF1AQ13111 956 aaPredicted RBP18.99■□□□□ 0.63
PDE4C-211ENST00000597360 RUNDC1Q96C34 613 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms