RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 METP08581 1390 aa16.08■□□□□ 0.16
SH2D3A-206ENST00000597254 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.16
SH2D3A-206ENST00000597254 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
SH2D3A-206ENST00000597254 PHLPP1O60346 1717 aa16.07■□□□□ 0.16
SH2D3A-206ENST00000597254 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
SH2D3A-206ENST00000597254 XRN1Q8IZH2 1706 aaKnown RBP16.05■□□□□ 0.16
SH2D3A-206ENST00000597254 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
SH2D3A-206ENST00000597254 JCADQ9P266 1359 aa16.05■□□□□ 0.16
SH2D3A-206ENST00000597254 STK26Q9P289 416 aa16.05■□□□□ 0.16
SH2D3A-206ENST00000597254 DCCP43146 1447 aa16.04■□□□□ 0.16
SH2D3A-206ENST00000597254 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
SH2D3A-206ENST00000597254 YTHDC2Q9H6S0 1430 aaKnown RBP16.03■□□□□ 0.16
SH2D3A-206ENST00000597254 LRPPRCP42704 1394 aaKnown RBP16.02■□□□□ 0.16
SH2D3A-206ENST00000597254 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.16
SH2D3A-206ENST00000597254 TESK2Q96S53 571 aa16.02■□□□□ 0.16
SH2D3A-206ENST00000597254 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
SH2D3A-206ENST00000597254 BRINP3Q76B58 766 aa16.01■□□□□ 0.15
SH2D3A-206ENST00000597254 ABCC11Q96J66 1382 aa16■□□□□ 0.15
SH2D3A-206ENST00000597254 COL16A1Q07092 1604 aaPredicted RBP16■□□□□ 0.15
SH2D3A-206ENST00000597254 ADGRL3Q9HAR2 1447 aa16■□□□□ 0.15
SH2D3A-206ENST00000597254 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
SH2D3A-206ENST00000597254 SIRT1Q96EB6 747 aa15.99■□□□□ 0.15
SH2D3A-206ENST00000597254 WASHC2AQ641Q2 1341 aa15.98■□□□□ 0.15
SH2D3A-206ENST00000597254 AHDC1Q5TGY3 1603 aaPredicted RBP15.98■□□□□ 0.15
SH2D3A-206ENST00000597254 SLC24A1O60721 1099 aa15.98■□□□□ 0.15
SH2D3A-206ENST00000597254 TMF1P82094 1093 aa15.98■□□□□ 0.15
SH2D3A-206ENST00000597254 SPATA31A6Q5VVP1 1343 aa15.97■□□□□ 0.15
SH2D3A-206ENST00000597254 MST1RQ04912 1400 aa15.97■□□□□ 0.15
SH2D3A-206ENST00000597254 MEX3CQ5U5Q3 659 aaKnown RBP15.97■□□□□ 0.15
SH2D3A-206ENST00000597254 CCDC7Q96M83 1385 aa15.97■□□□□ 0.15
SH2D3A-206ENST00000597254 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
SH2D3A-206ENST00000597254 PTCH1Q13635 1447 aa15.96■□□□□ 0.15
SH2D3A-206ENST00000597254 DLC1Q96QB1 1528 aa15.96■□□□□ 0.15
SH2D3A-206ENST00000597254 PRAM1Q96QH2 718 aa15.96■□□□□ 0.15
SH2D3A-206ENST00000597254 POGKQ9P215 609 aa15.96■□□□□ 0.15
SH2D3A-206ENST00000597254 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
SH2D3A-206ENST00000597254 POTEAQ6S8J7 498 aa15.95■□□□□ 0.14
SH2D3A-206ENST00000597254 WAPLQ7Z5K2 1190 aa15.95■□□□□ 0.14
SH2D3A-206ENST00000597254 ROBO2Q9HCK4 1378 aa15.95■□□□□ 0.14
SH2D3A-206ENST00000597254 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
SH2D3A-206ENST00000597254 SBNO2Q9Y2G9 1366 aa15.94■□□□□ 0.14
SH2D3A-206ENST00000597254 NALCNQ8IZF0 1738 aa15.94■□□□□ 0.14
SH2D3A-206ENST00000597254 TECPR2O15040 1411 aa15.94■□□□□ 0.14
SH2D3A-206ENST00000597254 SAFB2Q14151 953 aaKnown RBP eCLIP15.93■□□□□ 0.14
SH2D3A-206ENST00000597254 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
SH2D3A-206ENST00000597254 KNDC1Q76NI1 1749 aa15.93■□□□□ 0.14
SH2D3A-206ENST00000597254 PLEKHH1Q9ULM0 1364 aa15.92■□□□□ 0.14
SH2D3A-206ENST00000597254 LRRC59Q96AG4 307 aaKnown RBP15.92■□□□□ 0.14
SH2D3A-206ENST00000597254 SHPRHQ149N8 1683 aa15.92■□□□□ 0.14
SH2D3A-206ENST00000597254 QRICH2Q9H0J4 1663 aa15.92■□□□□ 0.14
SH2D3A-206ENST00000597254 NUTM2BA6NNL0 878 aaPredicted RBP15.91■□□□□ 0.14
SH2D3A-206ENST00000597254 NUTM2EB1AL46 878 aaPredicted RBP15.91■□□□□ 0.14
SH2D3A-206ENST00000597254 CDCA8Q53HL2 280 aa15.91■□□□□ 0.14
SH2D3A-206ENST00000597254 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
SH2D3A-206ENST00000597254 NUTM2AQ8IVF1 878 aaPredicted RBP15.91■□□□□ 0.14
SH2D3A-206ENST00000597254 C1orf167Q5SNV9 1468 aa15.91■□□□□ 0.14
SH2D3A-206ENST00000597254 DDX17Q92841 729 aaKnown RBP15.9■□□□□ 0.14
SH2D3A-206ENST00000597254 MINK1Q8N4C8 1332 aaPredicted RBP15.9■□□□□ 0.14
SH2D3A-206ENST00000597254 LRP6O75581 1613 aa15.9■□□□□ 0.14
SH2D3A-206ENST00000597254 ZNF772Q68DY9 489 aaPredicted RBP15.89■□□□□ 0.13
SH2D3A-206ENST00000597254 NHSL1Q5SYE7 1610 aa15.89■□□□□ 0.13
SH2D3A-206ENST00000597254 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
SH2D3A-206ENST00000597254 PUS7Q96PZ0 661 aaKnown RBP15.87■□□□□ 0.13
SH2D3A-206ENST00000597254 ORAI2Q96SN7 254 aa15.87■□□□□ 0.13
SH2D3A-206ENST00000597254 CDK19Q9BWU1 502 aa15.85■□□□□ 0.13
SH2D3A-206ENST00000597254 CABP2Q9NPB3 220 aa15.84■□□□□ 0.13
SH2D3A-206ENST00000597254 PNPLA6Q8IY17 1366 aa15.84■□□□□ 0.13
SH2D3A-206ENST00000597254 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
SH2D3A-206ENST00000597254 WASLO00401 505 aaPredicted RBP15.83■□□□□ 0.12
SH2D3A-206ENST00000597254 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
SH2D3A-206ENST00000597254 CDC42BPGQ6DT37 1551 aa15.83■□□□□ 0.12
SH2D3A-206ENST00000597254 SRPK2P78362 688 aaKnown RBP15.82■□□□□ 0.12
SH2D3A-206ENST00000597254 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
SH2D3A-206ENST00000597254 AFF2P51816 1311 aa15.81■□□□□ 0.12
SH2D3A-206ENST00000597254 C8orf37Q96NL8 207 aa15.81■□□□□ 0.12
SH2D3A-206ENST00000597254 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
SH2D3A-206ENST00000597254 NUTM2FA1L443 756 aa15.8■□□□□ 0.12
SH2D3A-206ENST00000597254 RXRBP28702 533 aa15.79■□□□□ 0.12
SH2D3A-206ENST00000597254 PANK3Q9H999 370 aa15.79■□□□□ 0.12
SH2D3A-206ENST00000597254 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
SH2D3A-206ENST00000597254 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
SH2D3A-206ENST00000597254 SLC12A5Q9H2X9 1139 aa15.78■□□□□ 0.12
SH2D3A-206ENST00000597254 ATAD2Q6PL18 1390 aa15.77■□□□□ 0.12
SH2D3A-206ENST00000597254 FOXO3O43524 673 aa15.77■□□□□ 0.12
SH2D3A-206ENST00000597254 TMC1Q8TDI8 760 aa15.77■□□□□ 0.12
SH2D3A-206ENST00000597254 ADGRB2O60241 1585 aa15.77■□□□□ 0.11
SH2D3A-206ENST00000597254 NUDT16Q96DE0 195 aaKnown RBP15.76■□□□□ 0.11
SH2D3A-206ENST00000597254 PER1O15534 1290 aaPredicted RBP15.75■□□□□ 0.11
SH2D3A-206ENST00000597254 XPCQ01831 940 aaPredicted RBP15.75■□□□□ 0.11
SH2D3A-206ENST00000597254 MYOM1P52179 1685 aa15.74■□□□□ 0.11
SH2D3A-206ENST00000597254 QTRT2Q9H974 415 aaKnown RBP15.74■□□□□ 0.11
SH2D3A-206ENST00000597254 CCDC61Q9Y6R9 512 aa15.74■□□□□ 0.11
SH2D3A-206ENST00000597254 PRR36Q9H6K5 1346 aa15.73■□□□□ 0.11
SH2D3A-206ENST00000597254 CABP1Q9NZU7 370 aa15.73■□□□□ 0.11
SH2D3A-206ENST00000597254 FMN2Q9NZ56 1722 aa15.73■□□□□ 0.11
SH2D3A-206ENST00000597254 PXDNQ92626 1479 aa15.72■□□□□ 0.11
SH2D3A-206ENST00000597254 RBM6P78332 1123 aaKnown RBP15.72■□□□□ 0.11
SH2D3A-206ENST00000597254 MIER1Q8N108 512 aa15.72■□□□□ 0.11
SH2D3A-206ENST00000597254 NINLQ9Y2I6 1382 aa15.72■□□□□ 0.11
SH2D3A-206ENST00000597254 ANP32CO43423 234 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms