RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 ST20-MTHFSA0A0A6YYL1 179 aa13.08□□□□□ -0.32
ZNF548-206ENST00000597047 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
ZNF548-206ENST00000597047 PIP4K2BP78356 416 aa13.08□□□□□ -0.32
ZNF548-206ENST00000597047 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
ZNF548-206ENST00000597047 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
ZNF548-206ENST00000597047 XIRP1Q702N8 1843 aaKnown RBP13.07□□□□□ -0.32
ZNF548-206ENST00000597047 HSPA5P11021 654 aaKnown RBP13.07□□□□□ -0.32
ZNF548-206ENST00000597047 EIF4G2P78344 907 aaKnown RBP eCLIP13.07□□□□□ -0.32
ZNF548-206ENST00000597047 USP47Q96K76 1375 aa13.07□□□□□ -0.32
ZNF548-206ENST00000597047 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
ZNF548-206ENST00000597047 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
ZNF548-206ENST00000597047 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
ZNF548-206ENST00000597047 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
ZNF548-206ENST00000597047 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
ZNF548-206ENST00000597047 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
ZNF548-206ENST00000597047 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
ZNF548-206ENST00000597047 TECPR2O15040 1411 aa13.05□□□□□ -0.32
ZNF548-206ENST00000597047 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
ZNF548-206ENST00000597047 DLC1Q96QB1 1528 aa13.04□□□□□ -0.32
ZNF548-206ENST00000597047 TOM1O60784 492 aa13.04□□□□□ -0.32
ZNF548-206ENST00000597047 CDK19Q9BWU1 502 aa13.04□□□□□ -0.32
ZNF548-206ENST00000597047 NALCNQ8IZF0 1738 aa13.04□□□□□ -0.32
ZNF548-206ENST00000597047 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
ZNF548-206ENST00000597047 CABP2Q9NPB3 220 aa13.03□□□□□ -0.32
ZNF548-206ENST00000597047 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
ZNF548-206ENST00000597047 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
ZNF548-206ENST00000597047 ESCO1Q5FWF5 840 aa13.01□□□□□ -0.33
ZNF548-206ENST00000597047 SLAIN2Q9P270 581 aa13.01□□□□□ -0.33
ZNF548-206ENST00000597047 EVC2Q86UK5 1308 aa13.01□□□□□ -0.33
ZNF548-206ENST00000597047 TMF1P82094 1093 aa13□□□□□ -0.33
ZNF548-206ENST00000597047 TMC1Q8TDI8 760 aa13□□□□□ -0.33
ZNF548-206ENST00000597047 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
ZNF548-206ENST00000597047 PMFBP1Q8TBY8 1022 aa12.99□□□□□ -0.33
ZNF548-206ENST00000597047 ORAI2Q96SN7 254 aa12.99□□□□□ -0.33
ZNF548-206ENST00000597047 NUDT16Q96DE0 195 aaKnown RBP12.98□□□□□ -0.33
ZNF548-206ENST00000597047 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
ZNF548-206ENST00000597047 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
ZNF548-206ENST00000597047 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
ZNF548-206ENST00000597047 TESK2Q96S53 571 aa12.96□□□□□ -0.33
ZNF548-206ENST00000597047 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
ZNF548-206ENST00000597047 FMN2Q9NZ56 1722 aa12.95□□□□□ -0.34
ZNF548-206ENST00000597047 IQSEC2Q5JU85 1478 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 C1orf167Q5SNV9 1468 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
ZNF548-206ENST00000597047 CABP1Q9NZU7 370 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 PHF8Q9UPP1 1060 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 MST1RQ04912 1400 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 CDC42BPGQ6DT37 1551 aa12.94□□□□□ -0.34
ZNF548-206ENST00000597047 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
ZNF548-206ENST00000597047 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
ZNF548-206ENST00000597047 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-206ENST00000597047 FOXO3O43524 673 aa12.93□□□□□ -0.34
ZNF548-206ENST00000597047 PSME1Q06323 249 aa12.93□□□□□ -0.34
ZNF548-206ENST00000597047 BRINP3Q76B58 766 aa12.93□□□□□ -0.34
ZNF548-206ENST00000597047 DCCP43146 1447 aa12.92□□□□□ -0.34
ZNF548-206ENST00000597047 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
ZNF548-206ENST00000597047 LMOD2Q6P5Q4 547 aa12.92□□□□□ -0.34
ZNF548-206ENST00000597047 CCDC61Q9Y6R9 512 aa12.92□□□□□ -0.34
ZNF548-206ENST00000597047 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
ZNF548-206ENST00000597047 PPIP5K1Q6PFW1 1433 aa12.91□□□□□ -0.34
ZNF548-206ENST00000597047 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-206ENST00000597047 SLC12A5Q9H2X9 1139 aa12.91□□□□□ -0.34
ZNF548-206ENST00000597047 ROBO1Q9Y6N7 1651 aa12.9□□□□□ -0.34
ZNF548-206ENST00000597047 SBNO2Q9Y2G9 1366 aa12.9□□□□□ -0.34
ZNF548-206ENST00000597047 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
ZNF548-206ENST00000597047 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
ZNF548-206ENST00000597047 KRT28Q7Z3Y7 464 aa12.89□□□□□ -0.35
ZNF548-206ENST00000597047 ACEP12821 1306 aa12.88□□□□□ -0.35
ZNF548-206ENST00000597047 ATAD2Q6PL18 1390 aa12.88□□□□□ -0.35
ZNF548-206ENST00000597047 ATP7BP35670 1465 aa12.88□□□□□ -0.35
ZNF548-206ENST00000597047 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
ZNF548-206ENST00000597047 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
ZNF548-206ENST00000597047 HSPA1LP34931 641 aa12.87□□□□□ -0.35
ZNF548-206ENST00000597047 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
ZNF548-206ENST00000597047 KIF7Q2M1P5 1343 aa12.87□□□□□ -0.35
ZNF548-206ENST00000597047 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
ZNF548-206ENST00000597047 PHLPP1O60346 1717 aa12.85□□□□□ -0.35
ZNF548-206ENST00000597047 PLEKHG3A1L390 1219 aa12.85□□□□□ -0.35
ZNF548-206ENST00000597047 NUTM2GQ5VZR2 741 aa12.85□□□□□ -0.35
ZNF548-206ENST00000597047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.85□□□□□ -0.35
ZNF548-206ENST00000597047 TERF2IPQ9NYB0 399 aa12.85□□□□□ -0.35
ZNF548-206ENST00000597047 WASHC2AQ641Q2 1341 aa12.85□□□□□ -0.35
ZNF548-206ENST00000597047 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
ZNF548-206ENST00000597047 ZNF316A6NFI3 1004 aaPredicted RBP12.84□□□□□ -0.35
ZNF548-206ENST00000597047 KIF1AQ12756 1690 aa12.83□□□□□ -0.35
ZNF548-206ENST00000597047 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
ZNF548-206ENST00000597047 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
ZNF548-206ENST00000597047 PANK3Q9H999 370 aa12.83□□□□□ -0.36
ZNF548-206ENST00000597047 NUTM2BA6NNL0 878 aaPredicted RBP12.82□□□□□ -0.36
ZNF548-206ENST00000597047 NUTM2EB1AL46 878 aaPredicted RBP12.82□□□□□ -0.36
ZNF548-206ENST00000597047 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
ZNF548-206ENST00000597047 NUTM2AQ8IVF1 878 aaPredicted RBP12.82□□□□□ -0.36
ZNF548-206ENST00000597047 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
ZNF548-206ENST00000597047 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
ZNF548-206ENST00000597047 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
ZNF548-206ENST00000597047 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
ZNF548-206ENST00000597047 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
ZNF548-206ENST00000597047 ZBTB7CA1YPR0 619 aa12.8□□□□□ -0.36
ZNF548-206ENST00000597047 SOX12O15370 315 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms