RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 HRCP23327 699 aa20.66■□□□□ 0.9
C19orf54-206ENST00000596940 TMEM132EQ6IEE7 984 aa20.66■□□□□ 0.9
C19orf54-206ENST00000596940 C14orf93Q9H972 538 aaKnown RBP20.66■□□□□ 0.9
C19orf54-206ENST00000596940 NPHP3Q7Z494 1330 aa20.66■□□□□ 0.9
C19orf54-206ENST00000596940 PIK3C2GO75747 1445 aa20.66■□□□□ 0.9
C19orf54-206ENST00000596940 SETD1AO15047 1707 aaKnown RBP20.66■□□□□ 0.9
C19orf54-206ENST00000596940 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
C19orf54-206ENST00000596940 NHSL1Q5SYE7 1610 aa20.64■□□□□ 0.9
C19orf54-206ENST00000596940 AFF2P51816 1311 aa20.64■□□□□ 0.89
C19orf54-206ENST00000596940 DHX57Q6P158 1386 aaKnown RBP20.63■□□□□ 0.89
C19orf54-206ENST00000596940 C8orf37Q96NL8 207 aa20.63■□□□□ 0.89
C19orf54-206ENST00000596940 NGLY1Q96IV0 654 aa20.62■□□□□ 0.89
C19orf54-206ENST00000596940 STAC3Q96MF2 364 aa20.62■□□□□ 0.89
C19orf54-206ENST00000596940 YTHDC2Q9H6S0 1430 aaKnown RBP20.61■□□□□ 0.89
C19orf54-206ENST00000596940 CDC42BPGQ6DT37 1551 aa20.6■□□□□ 0.89
C19orf54-206ENST00000596940 FOXO3O43524 673 aa20.59■□□□□ 0.89
C19orf54-206ENST00000596940 ADAMTS2O95450 1211 aa20.59■□□□□ 0.89
C19orf54-206ENST00000596940 CFAP70Q5T0N1 1121 aa20.59■□□□□ 0.89
C19orf54-206ENST00000596940 QTRT2Q9H974 415 aaKnown RBP20.59■□□□□ 0.89
C19orf54-206ENST00000596940 MYOM2P54296 1465 aa20.58■□□□□ 0.89
C19orf54-206ENST00000596940 NRXN1Q9ULB1 1477 aa20.57■□□□□ 0.88
C19orf54-206ENST00000596940 NUTM2FA1L443 756 aa20.57■□□□□ 0.88
C19orf54-206ENST00000596940 RBM6P78332 1123 aaKnown RBP20.57■□□□□ 0.88
C19orf54-206ENST00000596940 LAMC1P11047 1609 aa20.56■□□□□ 0.88
C19orf54-206ENST00000596940 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
C19orf54-206ENST00000596940 POGKQ9P215 609 aa20.55■□□□□ 0.88
C19orf54-206ENST00000596940 CDK12Q9NYV4 1490 aaPredicted RBP20.55■□□□□ 0.88
C19orf54-206ENST00000596940 IFT172Q9UG01 1749 aa20.54■□□□□ 0.88
C19orf54-206ENST00000596940 DCAF11Q8TEB1 546 aa20.53■□□□□ 0.88
C19orf54-206ENST00000596940 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
C19orf54-206ENST00000596940 FNBP4Q8N3X1 1017 aaPredicted RBP20.52■□□□□ 0.88
C19orf54-206ENST00000596940 USP21Q9UK80 565 aa20.52■□□□□ 0.88
C19orf54-206ENST00000596940 XPCQ01831 940 aaPredicted RBP20.51■□□□□ 0.87
C19orf54-206ENST00000596940 PSME1Q06323 249 aa20.51■□□□□ 0.87
C19orf54-206ENST00000596940 TRPC5Q9UL62 973 aaPredicted RBP20.51■□□□□ 0.87
C19orf54-206ENST00000596940 KDM2AQ9Y2K7 1162 aa20.51■□□□□ 0.87
C19orf54-206ENST00000596940 KNDC1Q76NI1 1749 aa20.5■□□□□ 0.87
C19orf54-206ENST00000596940 PXDNQ92626 1479 aa20.5■□□□□ 0.87
C19orf54-206ENST00000596940 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
C19orf54-206ENST00000596940 UPF1Q92900 1129 aaKnown RBP eCLIP20.49■□□□□ 0.871e-7■■■■□ 26
C19orf54-206ENST00000596940 PHF8Q9UPP1 1060 aa20.49■□□□□ 0.87
C19orf54-206ENST00000596940 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
C19orf54-206ENST00000596940 SPATA31A3Q5VYP0 1347 aa20.47■□□□□ 0.87
C19orf54-206ENST00000596940 TRAK1Q9UPV9 953 aa20.46■□□□□ 0.87
C19orf54-206ENST00000596940 DLC1Q96QB1 1528 aa20.45■□□□□ 0.86
C19orf54-206ENST00000596940 EIF3AQ14152 1382 aaKnown RBP20.44■□□□□ 0.86
C19orf54-206ENST00000596940 HAP1P54257 671 aaPredicted RBP20.43■□□□□ 0.86
C19orf54-206ENST00000596940 COL22A1Q8NFW1 1626 aaPredicted RBP20.42■□□□□ 0.86
C19orf54-206ENST00000596940 ANKARQ7Z5J8 1434 aa20.42■□□□□ 0.86
C19orf54-206ENST00000596940 FMN2Q9NZ56 1722 aa20.41■□□□□ 0.86
C19orf54-206ENST00000596940 RGS12O14924 1447 aa20.4■□□□□ 0.86
C19orf54-206ENST00000596940 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
C19orf54-206ENST00000596940 ADGRB1O14514 1584 aa20.39■□□□□ 0.85
C19orf54-206ENST00000596940 SBNO1A3KN83 1393 aa20.39■□□□□ 0.85
C19orf54-206ENST00000596940 ARHGEF10O15013 1369 aa20.39■□□□□ 0.85
C19orf54-206ENST00000596940 ATRNO75882 1429 aa20.38■□□□□ 0.85
C19orf54-206ENST00000596940 MINK1Q8N4C8 1332 aaPredicted RBP20.38■□□□□ 0.85
C19orf54-206ENST00000596940 WASLO00401 505 aaPredicted RBP20.38■□□□□ 0.85
C19orf54-206ENST00000596940 LMOD2Q6P5Q4 547 aa20.38■□□□□ 0.85
C19orf54-206ENST00000596940 HIRIP3Q9BW71 556 aaPredicted RBP20.38■□□□□ 0.85
C19orf54-206ENST00000596940 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
C19orf54-206ENST00000596940 GPRASP1Q5JY77 1395 aa20.37■□□□□ 0.85
C19orf54-206ENST00000596940 UNC5CLQ8IV45 518 aa20.37■□□□□ 0.85
C19orf54-206ENST00000596940 PMFBP1Q8TBY8 1022 aa20.37■□□□□ 0.85
C19orf54-206ENST00000596940 GJD4Q96KN9 370 aaPredicted RBP20.37■□□□□ 0.85
C19orf54-206ENST00000596940 ATAD2Q6PL18 1390 aa20.36■□□□□ 0.85
C19orf54-206ENST00000596940 BCL9LQ86UU0 1499 aa20.36■□□□□ 0.85
C19orf54-206ENST00000596940 NGDNQ8NEJ9 315 aaKnown RBP20.32■□□□□ 0.84
C19orf54-206ENST00000596940 ADGRB2O60241 1585 aa20.32■□□□□ 0.84
C19orf54-206ENST00000596940 CABLES1Q8TDN4 633 aa20.31■□□□□ 0.84
C19orf54-206ENST00000596940 CCDC125Q86Z20 511 aa20.3■□□□□ 0.84
C19orf54-206ENST00000596940 SLIT2O94813 1529 aa20.29■□□□□ 0.84
C19orf54-206ENST00000596940 PLEKHG5O94827 1062 aa20.29■□□□□ 0.84
C19orf54-206ENST00000596940 PRR36Q9H6K5 1346 aa20.28■□□□□ 0.84
C19orf54-206ENST00000596940 TULP4Q9NRJ4 1543 aa20.28■□□□□ 0.84
C19orf54-206ENST00000596940 NUDT16Q96DE0 195 aaKnown RBP20.28■□□□□ 0.84
C19orf54-206ENST00000596940 VPS72Q15906 364 aa20.27■□□□□ 0.84
C19orf54-206ENST00000596940 PAK3O75914 559 aaPredicted RBP20.26■□□□□ 0.83
C19orf54-206ENST00000596940 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
C19orf54-206ENST00000596940 CCDC9Q9Y3X0 531 aaKnown RBP20.25■□□□□ 0.83
C19orf54-206ENST00000596940 FAM83GA6ND36 823 aa20.24■□□□□ 0.83
C19orf54-206ENST00000596940 CCDC61Q9Y6R9 512 aa20.24■□□□□ 0.83
C19orf54-206ENST00000596940 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
C19orf54-206ENST00000596940 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
C19orf54-206ENST00000596940 MARF1Q9Y4F3 1742 aaKnown RBP20.22■□□□□ 0.83
C19orf54-206ENST00000596940 RGPD8O14715 1765 aaPredicted RBP20.21■□□□□ 0.83
C19orf54-206ENST00000596940 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
C19orf54-206ENST00000596940 ONECUT3O60422 494 aaPredicted RBP20.2■□□□□ 0.82
C19orf54-206ENST00000596940 SEPT12Q8IYM1 358 aa20.2■□□□□ 0.82
C19orf54-206ENST00000596940 PLEKHG3A1L390 1219 aa20.19■□□□□ 0.82
C19orf54-206ENST00000596940 BTG4Q9NY30 223 aa20.19■□□□□ 0.82
C19orf54-206ENST00000596940 CENPJQ9HC77 1338 aaPredicted RBP20.19■□□□□ 0.82
C19orf54-206ENST00000596940 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.19■□□□□ 0.82
C19orf54-206ENST00000596940 NBPF8Q3BBV2 869 aa20.18■□□□□ 0.82
C19orf54-206ENST00000596940 L3MBTL2Q969R5 705 aa20.18■□□□□ 0.82
C19orf54-206ENST00000596940 ATP7BP35670 1465 aa20.18■□□□□ 0.82
C19orf54-206ENST00000596940 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
C19orf54-206ENST00000596940 PRDM11Q9NQV5 511 aa20.17■□□□□ 0.82
C19orf54-206ENST00000596940 ACEP12821 1306 aa20.16■□□□□ 0.82
C19orf54-206ENST00000596940 POLR3AO14802 1390 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms