RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 UPF1Q92900 1129 aaKnown RBP eCLIP24.02■■□□□ 1.44
LIM2-202ENST00000596399 IFT172Q9UG01 1749 aa24■■□□□ 1.43
LIM2-202ENST00000596399 NUTM2FA1L443 756 aa23.99■■□□□ 1.43
LIM2-202ENST00000596399 QTRT2Q9H974 415 aaKnown RBP23.99■■□□□ 1.43
LIM2-202ENST00000596399 ESCO1Q5FWF5 840 aa23.98■■□□□ 1.43
LIM2-202ENST00000596399 PLEKHH1Q9ULM0 1364 aa23.98■■□□□ 1.43
LIM2-202ENST00000596399 XPCQ01831 940 aaPredicted RBP23.97■■□□□ 1.43
LIM2-202ENST00000596399 NGLY1Q96IV0 654 aa23.97■■□□□ 1.43
LIM2-202ENST00000596399 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
LIM2-202ENST00000596399 ANKRD30BQ9BXX2 1392 aa23.96■■□□□ 1.43
LIM2-202ENST00000596399 LRPPRCP42704 1394 aaKnown RBP23.95■■□□□ 1.42
LIM2-202ENST00000596399 PIK3C2GO75747 1445 aa23.94■■□□□ 1.42
LIM2-202ENST00000596399 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
LIM2-202ENST00000596399 RGS12O14924 1447 aa23.93■■□□□ 1.42
LIM2-202ENST00000596399 TECPR2O15040 1411 aa23.93■■□□□ 1.42
LIM2-202ENST00000596399 FOXO3O43524 673 aa23.93■■□□□ 1.42
LIM2-202ENST00000596399 RBM6P78332 1123 aaKnown RBP23.92■■□□□ 1.42
LIM2-202ENST00000596399 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
LIM2-202ENST00000596399 PXDNQ92626 1479 aa23.91■■□□□ 1.42
LIM2-202ENST00000596399 YTHDC2Q9H6S0 1430 aaKnown RBP23.9■■□□□ 1.42
LIM2-202ENST00000596399 NPHP3Q7Z494 1330 aa23.89■■□□□ 1.42
LIM2-202ENST00000596399 USP21Q9UK80 565 aa23.89■■□□□ 1.41
LIM2-202ENST00000596399 COL22A1Q8NFW1 1626 aaPredicted RBP23.88■■□□□ 1.41
LIM2-202ENST00000596399 CFAP70Q5T0N1 1121 aa23.88■■□□□ 1.41
LIM2-202ENST00000596399 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
LIM2-202ENST00000596399 C14orf93Q9H972 538 aaKnown RBP23.86■■□□□ 1.41
LIM2-202ENST00000596399 MYOM2P54296 1465 aa23.86■■□□□ 1.41
LIM2-202ENST00000596399 FNBP4Q8N3X1 1017 aaPredicted RBP23.85■■□□□ 1.41
LIM2-202ENST00000596399 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
LIM2-202ENST00000596399 FMN2Q9NZ56 1722 aa23.84■■□□□ 1.41
LIM2-202ENST00000596399 NRXN1Q9ULB1 1477 aa23.82■■□□□ 1.4
LIM2-202ENST00000596399 SAFB2Q14151 953 aaKnown RBP eCLIP23.82■■□□□ 1.4
LIM2-202ENST00000596399 TRPC5Q9UL62 973 aaPredicted RBP23.81■■□□□ 1.4
LIM2-202ENST00000596399 ATRNO75882 1429 aa23.79■■□□□ 1.4
LIM2-202ENST00000596399 BCL9LQ86UU0 1499 aa23.79■■□□□ 1.4
LIM2-202ENST00000596399 RGPD8O14715 1765 aaPredicted RBP23.78■■□□□ 1.4
LIM2-202ENST00000596399 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
LIM2-202ENST00000596399 PRAM1Q96QH2 718 aa23.78■■□□□ 1.4
LIM2-202ENST00000596399 DHX57Q6P158 1386 aaKnown RBP23.78■■□□□ 1.4
LIM2-202ENST00000596399 KRT28Q7Z3Y7 464 aa23.77■■□□□ 1.4
LIM2-202ENST00000596399 SPATA31A3Q5VYP0 1347 aa23.77■■□□□ 1.4
LIM2-202ENST00000596399 MARF1Q9Y4F3 1742 aaKnown RBP23.76■■□□□ 1.39
LIM2-202ENST00000596399 PLEKHG5O94827 1062 aa23.76■■□□□ 1.39
LIM2-202ENST00000596399 KIF1AQ12756 1690 aa23.74■■□□□ 1.39
LIM2-202ENST00000596399 PHF8Q9UPP1 1060 aa23.74■■□□□ 1.39
LIM2-202ENST00000596399 ACIN1Q9UKV3 1341 aaKnown RBP23.74■■□□□ 1.39
LIM2-202ENST00000596399 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
LIM2-202ENST00000596399 CABLES1Q8TDN4 633 aa23.72■■□□□ 1.39
LIM2-202ENST00000596399 POGKQ9P215 609 aa23.71■■□□□ 1.39
LIM2-202ENST00000596399 ATAD2Q6PL18 1390 aa23.7■■□□□ 1.38
LIM2-202ENST00000596399 HIRIP3Q9BW71 556 aaPredicted RBP23.7■■□□□ 1.38
LIM2-202ENST00000596399 TRAK1Q9UPV9 953 aa23.7■■□□□ 1.38
LIM2-202ENST00000596399 ADGRB1O14514 1584 aa23.69■■□□□ 1.38
LIM2-202ENST00000596399 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
LIM2-202ENST00000596399 GJD4Q96KN9 370 aaPredicted RBP23.69■■□□□ 1.38
LIM2-202ENST00000596399 EP400Q96L91 3159 aa23.69■■□□□ 1.38
LIM2-202ENST00000596399 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
LIM2-202ENST00000596399 USP32Q8NFA0 1604 aa23.68■■□□□ 1.38
LIM2-202ENST00000596399 TNS3Q68CZ2 1445 aa23.67■■□□□ 1.38
LIM2-202ENST00000596399 LMOD2Q6P5Q4 547 aa23.67■■□□□ 1.38
LIM2-202ENST00000596399 SLIT2O94813 1529 aa23.67■■□□□ 1.38
LIM2-202ENST00000596399 DLC1Q96QB1 1528 aa23.67■■□□□ 1.38
LIM2-202ENST00000596399 PSME1Q06323 249 aa23.66■■□□□ 1.38
LIM2-202ENST00000596399 UNC5CLQ8IV45 518 aa23.66■■□□□ 1.38
LIM2-202ENST00000596399 MINK1Q8N4C8 1332 aaPredicted RBP23.65■■□□□ 1.38
LIM2-202ENST00000596399 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
LIM2-202ENST00000596399 GLI3P10071 1580 aa23.64■■□□□ 1.37
LIM2-202ENST00000596399 RALGAPBQ86X10 1494 aa23.63■■□□□ 1.37
LIM2-202ENST00000596399 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.62■■□□□ 1.37
LIM2-202ENST00000596399 SBNO1A3KN83 1393 aa23.62■■□□□ 1.37
LIM2-202ENST00000596399 PRR36Q9H6K5 1346 aa23.61■■□□□ 1.37
LIM2-202ENST00000596399 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
LIM2-202ENST00000596399 ANKARQ7Z5J8 1434 aa23.59■■□□□ 1.37
LIM2-202ENST00000596399 ABCA3Q99758 1704 aa23.59■■□□□ 1.37
LIM2-202ENST00000596399 SRCAPQ6ZRS2 3230 aa23.58■■□□□ 1.37
LIM2-202ENST00000596399 FAM83GA6ND36 823 aa23.57■■□□□ 1.36
LIM2-202ENST00000596399 PLCH1Q4KWH8 1693 aa23.57■■□□□ 1.36
LIM2-202ENST00000596399 ARHGEF10O15013 1369 aa23.56■■□□□ 1.36
LIM2-202ENST00000596399 WASLO00401 505 aaPredicted RBP23.56■■□□□ 1.36
LIM2-202ENST00000596399 TRPM3Q9HCF6 1732 aaPredicted RBP23.55■■□□□ 1.36
LIM2-202ENST00000596399 VPS72Q15906 364 aa23.54■■□□□ 1.36
LIM2-202ENST00000596399 CCDC9Q9Y3X0 531 aaKnown RBP23.54■■□□□ 1.36
LIM2-202ENST00000596399 BRWD3Q6RI45 1802 aa23.54■■□□□ 1.36
LIM2-202ENST00000596399 TULP4Q9NRJ4 1543 aa23.54■■□□□ 1.36
LIM2-202ENST00000596399 HRCP23327 699 aa23.53■■□□□ 1.36
LIM2-202ENST00000596399 SEPT12Q8IYM1 358 aa23.53■■□□□ 1.36
LIM2-202ENST00000596399 GPRASP1Q5JY77 1395 aa23.51■■□□□ 1.35
LIM2-202ENST00000596399 ALS2Q96Q42 1657 aa23.51■■□□□ 1.35
LIM2-202ENST00000596399 ARHGEF28Q8N1W1 1705 aaKnown RBP23.5■■□□□ 1.35
LIM2-202ENST00000596399 NWD2Q9ULI1 1742 aa23.5■■□□□ 1.35
LIM2-202ENST00000596399 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
LIM2-202ENST00000596399 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
LIM2-202ENST00000596399 PAK3O75914 559 aaPredicted RBP23.48■■□□□ 1.35
LIM2-202ENST00000596399 STAC3Q96MF2 364 aa23.48■■□□□ 1.35
LIM2-202ENST00000596399 BTG4Q9NY30 223 aa23.48■■□□□ 1.35
LIM2-202ENST00000596399 EIF3AQ14152 1382 aaKnown RBP23.47■■□□□ 1.35
LIM2-202ENST00000596399 ONECUT3O60422 494 aaPredicted RBP23.46■■□□□ 1.35
LIM2-202ENST00000596399 NUDT16Q96DE0 195 aaKnown RBP23.46■■□□□ 1.35
LIM2-202ENST00000596399 ZRANB1Q9UGI0 708 aa23.46■■□□□ 1.35
LIM2-202ENST00000596399 ATP7BP35670 1465 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms