RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 TRAK1Q9UPV9 953 aa26.22■■□□□ 1.79
ZNF558-204ENST00000596172 NBPF1Q3BBV0 1214 aa26.21■■□□□ 1.79
ZNF558-204ENST00000596172 POGKQ9P215 609 aa26.19■■□□□ 1.78
ZNF558-204ENST00000596172 ROBO1Q9Y6N7 1651 aa26.19■■□□□ 1.78
ZNF558-204ENST00000596172 BRINP3Q76B58 766 aa26.17■■□□□ 1.78
ZNF558-204ENST00000596172 CDC42BPGQ6DT37 1551 aa26.16■■□□□ 1.78
ZNF558-204ENST00000596172 C1orf167Q5SNV9 1468 aa26.16■■□□□ 1.78
ZNF558-204ENST00000596172 NBPF8Q3BBV2 869 aa26.14■■□□□ 1.78
ZNF558-204ENST00000596172 TIMELESSQ9UNS1 1208 aa26.14■■□□□ 1.78
ZNF558-204ENST00000596172 SAFB2Q14151 953 aaKnown RBP eCLIP26.12■■□□□ 1.77
ZNF558-204ENST00000596172 CCER1Q8TC90 406 aaPredicted RBP26.09■■□□□ 1.77
ZNF558-204ENST00000596172 ROCK2O75116 1388 aaKnown RBP26.07■■□□□ 1.76
ZNF558-204ENST00000596172 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
ZNF558-204ENST00000596172 TRPM1Q7Z4N2 1603 aa26.07■■□□□ 1.76
ZNF558-204ENST00000596172 ORAI2Q96SN7 254 aa26.07■■□□□ 1.76
ZNF558-204ENST00000596172 AHDC1Q5TGY3 1603 aaPredicted RBP26.06■■□□□ 1.76
ZNF558-204ENST00000596172 ADGRB2O60241 1585 aa26.05■■□□□ 1.76
ZNF558-204ENST00000596172 MINK1Q8N4C8 1332 aaPredicted RBP26.05■■□□□ 1.76
ZNF558-204ENST00000596172 ARHGEF28Q8N1W1 1705 aaKnown RBP26.05■■□□□ 1.76
ZNF558-204ENST00000596172 WASLO00401 505 aaPredicted RBP26.03■■□□□ 1.76
ZNF558-204ENST00000596172 ESCO1Q5FWF5 840 aa26.03■■□□□ 1.76
ZNF558-204ENST00000596172 HIRIP3Q9BW71 556 aaPredicted RBP26.02■■□□□ 1.76
ZNF558-204ENST00000596172 NUTM2FA1L443 756 aa26.01■■□□□ 1.75
ZNF558-204ENST00000596172 RALGAPBQ86X10 1494 aa26.01■■□□□ 1.75
ZNF558-204ENST00000596172 CENPJQ9HC77 1338 aaPredicted RBP26.01■■□□□ 1.75
ZNF558-204ENST00000596172 FMN2Q9NZ56 1722 aa26.01■■□□□ 1.75
ZNF558-204ENST00000596172 PHLPP1O60346 1717 aa26■■□□□ 1.75
ZNF558-204ENST00000596172 ANKARQ7Z5J8 1434 aa26■■□□□ 1.75
ZNF558-204ENST00000596172 EIF3AQ14152 1382 aaKnown RBP26■■□□□ 1.75
ZNF558-204ENST00000596172 COL16A1Q07092 1604 aaPredicted RBP25.99■■□□□ 1.75
ZNF558-204ENST00000596172 JCADQ9P266 1359 aa25.98■■□□□ 1.75
ZNF558-204ENST00000596172 NHSL1Q5SYE7 1610 aa25.97■■□□□ 1.75
ZNF558-204ENST00000596172 LRRC59Q96AG4 307 aaKnown RBP25.97■■□□□ 1.75
ZNF558-204ENST00000596172 CARD11Q9BXL7 1154 aa25.97■■□□□ 1.75
ZNF558-204ENST00000596172 SOS2Q07890 1332 aaPredicted RBP25.96■■□□□ 1.75
ZNF558-204ENST00000596172 NPHP3Q7Z494 1330 aa25.96■■□□□ 1.75
ZNF558-204ENST00000596172 DDX17Q92841 729 aaKnown RBP25.96■■□□□ 1.75
ZNF558-204ENST00000596172 PHF8Q9UPP1 1060 aa25.94■■□□□ 1.74
ZNF558-204ENST00000596172 FOXO3O43524 673 aa25.93■■□□□ 1.74
ZNF558-204ENST00000596172 CDK19Q9BWU1 502 aa25.93■■□□□ 1.74
ZNF558-204ENST00000596172 TULP4Q9NRJ4 1543 aa25.93■■□□□ 1.74
ZNF558-204ENST00000596172 PRR36Q9H6K5 1346 aa25.92■■□□□ 1.74
ZNF558-204ENST00000596172 NUDT16Q96DE0 195 aaKnown RBP25.89■■□□□ 1.74
ZNF558-204ENST00000596172 SPATA31A6Q5VVP1 1343 aa25.88■■□□□ 1.73
ZNF558-204ENST00000596172 USP32Q8NFA0 1604 aa25.88■■□□□ 1.73
ZNF558-204ENST00000596172 KIF1AQ12756 1690 aa25.88■■□□□ 1.73
ZNF558-204ENST00000596172 PXDNQ92626 1479 aa25.87■■□□□ 1.73
ZNF558-204ENST00000596172 SBNO2Q9Y2G9 1366 aa25.86■■□□□ 1.73
ZNF558-204ENST00000596172 CCDC61Q9Y6R9 512 aa25.86■■□□□ 1.73
ZNF558-204ENST00000596172 EVC2Q86UK5 1308 aa25.85■■□□□ 1.73
ZNF558-204ENST00000596172 ATP7BP35670 1465 aa25.85■■□□□ 1.73
ZNF558-204ENST00000596172 MED1Q15648 1581 aaPredicted RBP25.84■■□□□ 1.73
ZNF558-204ENST00000596172 KRT28Q7Z3Y7 464 aa25.84■■□□□ 1.73
ZNF558-204ENST00000596172 PMFBP1Q8TBY8 1022 aa25.84■■□□□ 1.73
ZNF558-204ENST00000596172 QRICH2Q9H0J4 1663 aa25.83■■□□□ 1.73
ZNF558-204ENST00000596172 PNPLA6Q8IY17 1366 aa25.83■■□□□ 1.73
ZNF558-204ENST00000596172 SRPK2P78362 688 aaKnown RBP25.83■■□□□ 1.73
ZNF558-204ENST00000596172 PSME1Q06323 249 aa25.83■■□□□ 1.73
ZNF558-204ENST00000596172 SHPRHQ149N8 1683 aa25.83■■□□□ 1.73
ZNF558-204ENST00000596172 RGPD8O14715 1765 aaPredicted RBP25.82■■□□□ 1.72
ZNF558-204ENST00000596172 PLEKHG3A1L390 1219 aa25.82■■□□□ 1.72
ZNF558-204ENST00000596172 XPCQ01831 940 aaPredicted RBP25.81■■□□□ 1.72
ZNF558-204ENST00000596172 DISP3Q9P2K9 1392 aa25.81■■□□□ 1.72
ZNF558-204ENST00000596172 CABP2Q9NPB3 220 aa25.8■■□□□ 1.72
ZNF558-204ENST00000596172 SLC24A1O60721 1099 aa25.79■■□□□ 1.72
ZNF558-204ENST00000596172 SPATA31A3Q5VYP0 1347 aa25.79■■□□□ 1.72
ZNF558-204ENST00000596172 SBNO1A3KN83 1393 aa25.79■■□□□ 1.72
ZNF558-204ENST00000596172 NGDNQ8NEJ9 315 aaKnown RBP25.78■■□□□ 1.72
ZNF558-204ENST00000596172 ST20-MTHFSA0A0A6YYL1 179 aa25.76■■□□□ 1.71
ZNF558-204ENST00000596172 POLR3AO14802 1390 aaPredicted RBP25.76■■□□□ 1.71
ZNF558-204ENST00000596172 PUS7Q96PZ0 661 aaKnown RBP25.74■■□□□ 1.71
ZNF558-204ENST00000596172 TESK2Q96S53 571 aa25.74■■□□□ 1.71
ZNF558-204ENST00000596172 ITSN1Q15811 1721 aa25.74■■□□□ 1.71
ZNF558-204ENST00000596172 USP47Q96K76 1375 aa25.73■■□□□ 1.71
ZNF558-204ENST00000596172 ACEP12821 1306 aa25.73■■□□□ 1.71
ZNF558-204ENST00000596172 TOPAZ1Q8N9V7 1692 aa25.72■■□□□ 1.71
ZNF558-204ENST00000596172 PHF23Q9BUL5 403 aaPredicted RBP25.72■■□□□ 1.71
ZNF558-204ENST00000596172 LRP6O75581 1613 aa25.72■■□□□ 1.71
ZNF558-204ENST00000596172 TNS3Q68CZ2 1445 aa25.71■■□□□ 1.71
ZNF558-204ENST00000596172 PPIP5K1Q6PFW1 1433 aa25.71■■□□□ 1.71
ZNF558-204ENST00000596172 ATAD2Q6PL18 1390 aa25.71■■□□□ 1.71
ZNF558-204ENST00000596172 NUTM2BA6NNL0 878 aaPredicted RBP25.71■■□□□ 1.71
ZNF558-204ENST00000596172 NUTM2EB1AL46 878 aaPredicted RBP25.71■■□□□ 1.71
ZNF558-204ENST00000596172 NUTM2AQ8IVF1 878 aaPredicted RBP25.71■■□□□ 1.71
ZNF558-204ENST00000596172 CABP1Q9NZU7 370 aa25.71■■□□□ 1.71
ZNF558-204ENST00000596172 COL22A1Q8NFW1 1626 aaPredicted RBP25.7■■□□□ 1.7
ZNF558-204ENST00000596172 ARHGEF10O15013 1369 aa25.69■■□□□ 1.7
ZNF558-204ENST00000596172 MEX3CQ5U5Q3 659 aaKnown RBP25.67■■□□□ 1.7
ZNF558-204ENST00000596172 RGS17Q9UGC6 210 aaPredicted RBP25.66■■□□□ 1.7
ZNF558-204ENST00000596172 BRD4O60885 1362 aaPredicted RBP25.66■■□□□ 1.7
ZNF558-204ENST00000596172 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.7
ZNF558-204ENST00000596172 ZNF692Q9BU19 519 aaPredicted RBP25.63■■□□□ 1.69
ZNF558-204ENST00000596172 PAK3O75914 559 aaPredicted RBP25.62■■□□□ 1.69
ZNF558-204ENST00000596172 LMOD2Q6P5Q4 547 aa25.62■■□□□ 1.69
ZNF558-204ENST00000596172 TMF1P82094 1093 aa25.61■■□□□ 1.69
ZNF558-204ENST00000596172 ADAMTS2O95450 1211 aa25.6■■□□□ 1.69
ZNF558-204ENST00000596172 ALS2Q96Q42 1657 aa25.58■■□□□ 1.69
ZNF558-204ENST00000596172 USP6P35125 1406 aa25.58■■□□□ 1.69
ZNF558-204ENST00000596172 CPSF1Q10570 1443 aaKnown RBP25.58■■□□□ 1.69
ZNF558-204ENST00000596172 EIF4G2P78344 907 aaKnown RBP eCLIP25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms