RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 POGKQ9P215 609 aa28.59■■■□□ 2.17
CCDC61-205ENST00000596161 PLEKHH1Q9ULM0 1364 aa28.58■■■□□ 2.17
CCDC61-205ENST00000596161 RALGAPBQ86X10 1494 aa28.58■■■□□ 2.17
CCDC61-205ENST00000596161 GPRASP1Q5JY77 1395 aa28.55■■■□□ 2.16
CCDC61-205ENST00000596161 ARHGEF28Q8N1W1 1705 aaKnown RBP28.55■■■□□ 2.16
CCDC61-205ENST00000596161 SCAF1Q9H7N4 1312 aaKnown RBP28.54■■■□□ 2.16
CCDC61-205ENST00000596161 PIP4K2BP78356 416 aa28.54■■■□□ 2.16
CCDC61-205ENST00000596161 CDC42BPGQ6DT37 1551 aa28.52■■■□□ 2.16
CCDC61-205ENST00000596161 SAFB2Q14151 953 aaKnown RBP eCLIP28.51■■■□□ 2.15
CCDC61-205ENST00000596161 SLAIN2Q9P270 581 aa28.51■■■□□ 2.15
CCDC61-205ENST00000596161 ILDR1Q86SU0 546 aaPredicted RBP28.49■■■□□ 2.15
CCDC61-205ENST00000596161 CARD11Q9BXL7 1154 aa28.49■■■□□ 2.15
CCDC61-205ENST00000596161 EIF3AQ14152 1382 aaKnown RBP28.48■■■□□ 2.15
CCDC61-205ENST00000596161 MST1RQ04912 1400 aa28.46■■■□□ 2.15
CCDC61-205ENST00000596161 ADGRB2O60241 1585 aa28.45■■■□□ 2.15
CCDC61-205ENST00000596161 CENPJQ9HC77 1338 aaPredicted RBP28.44■■■□□ 2.14
CCDC61-205ENST00000596161 MINK1Q8N4C8 1332 aaPredicted RBP28.43■■■□□ 2.14
CCDC61-205ENST00000596161 ROBO1Q9Y6N7 1651 aa28.41■■■□□ 2.14
CCDC61-205ENST00000596161 C1orf167Q5SNV9 1468 aa28.4■■■□□ 2.14
CCDC61-205ENST00000596161 FMN2Q9NZ56 1722 aa28.4■■■□□ 2.14
CCDC61-205ENST00000596161 HIRIP3Q9BW71 556 aaPredicted RBP28.39■■■□□ 2.14
CCDC61-205ENST00000596161 QRICH2Q9H0J4 1663 aa28.37■■■□□ 2.13
CCDC61-205ENST00000596161 WASLO00401 505 aaPredicted RBP28.35■■■□□ 2.13
CCDC61-205ENST00000596161 BRINP3Q76B58 766 aa28.35■■■□□ 2.13
CCDC61-205ENST00000596161 ANKARQ7Z5J8 1434 aa28.34■■■□□ 2.13
CCDC61-205ENST00000596161 NUTM2FA1L443 756 aa28.32■■■□□ 2.12
CCDC61-205ENST00000596161 TULP4Q9NRJ4 1543 aa28.3■■■□□ 2.12
CCDC61-205ENST00000596161 HSPA1LP34931 641 aa28.3■■■□□ 2.12
CCDC61-205ENST00000596161 SBNO2Q9Y2G9 1366 aa28.29■■■□□ 2.12
CCDC61-205ENST00000596161 ESCO1Q5FWF5 840 aa28.29■■■□□ 2.12
CCDC61-205ENST00000596161 ORAI2Q96SN7 254 aa28.29■■■□□ 2.12
CCDC61-205ENST00000596161 CDK19Q9BWU1 502 aa28.28■■■□□ 2.12
CCDC61-205ENST00000596161 USP47Q96K76 1375 aa28.27■■■□□ 2.12
CCDC61-205ENST00000596161 AHDC1Q5TGY3 1603 aaPredicted RBP28.27■■■□□ 2.12
CCDC61-205ENST00000596161 EVC2Q86UK5 1308 aa28.26■■■□□ 2.11
CCDC61-205ENST00000596161 KIF1AQ12756 1690 aa28.25■■■□□ 2.11
CCDC61-205ENST00000596161 PHLPP1O60346 1717 aa28.24■■■□□ 2.11
CCDC61-205ENST00000596161 NHSL1Q5SYE7 1610 aa28.24■■■□□ 2.11
CCDC61-205ENST00000596161 USP32Q8NFA0 1604 aa28.24■■■□□ 2.11
CCDC61-205ENST00000596161 SLC24A1O60721 1099 aa28.23■■■□□ 2.11
CCDC61-205ENST00000596161 SRPK2P78362 688 aaKnown RBP28.23■■■□□ 2.11
CCDC61-205ENST00000596161 ST20-MTHFSA0A0A6YYL1 179 aa28.22■■■□□ 2.11
CCDC61-205ENST00000596161 ATP7BP35670 1465 aa28.21■■■□□ 2.11
CCDC61-205ENST00000596161 PRR36Q9H6K5 1346 aa28.21■■■□□ 2.11
CCDC61-205ENST00000596161 NUDT16Q96DE0 195 aaKnown RBP28.21■■■□□ 2.11
CCDC61-205ENST00000596161 PHF8Q9UPP1 1060 aa28.21■■■□□ 2.11
CCDC61-205ENST00000596161 RGPD8O14715 1765 aaPredicted RBP28.21■■■□□ 2.11
CCDC61-205ENST00000596161 NPHP3Q7Z494 1330 aa28.2■■■□□ 2.11
CCDC61-205ENST00000596161 ITSN1Q15811 1721 aa28.2■■■□□ 2.1
CCDC61-205ENST00000596161 COL16A1Q07092 1604 aaPredicted RBP28.18■■■□□ 2.1
CCDC61-205ENST00000596161 CABP2Q9NPB3 220 aa28.17■■■□□ 2.1
CCDC61-205ENST00000596161 CCDC61Q9Y6R9 512 aa28.16■■■□□ 2.1
CCDC61-205ENST00000596161 FOXO3O43524 673 aa28.15■■■□□ 2.1
CCDC61-205ENST00000596161 EIF4G2P78344 907 aaKnown RBP eCLIP28.15■■■□□ 2.1
CCDC61-205ENST00000596161 TESK2Q96S53 571 aa28.15■■■□□ 2.1
CCDC61-205ENST00000596161 DDX17Q92841 729 aaKnown RBP28.14■■■□□ 2.1
CCDC61-205ENST00000596161 TOPAZ1Q8N9V7 1692 aa28.13■■■□□ 2.09
CCDC61-205ENST00000596161 PMFBP1Q8TBY8 1022 aa28.13■■■□□ 2.09
CCDC61-205ENST00000596161 SOS2Q07890 1332 aaPredicted RBP28.13■■■□□ 2.09
CCDC61-205ENST00000596161 ATAD2Q6PL18 1390 aa28.11■■■□□ 2.09
CCDC61-205ENST00000596161 LRRC59Q96AG4 307 aaKnown RBP28.11■■■□□ 2.09
CCDC61-205ENST00000596161 NGDNQ8NEJ9 315 aaKnown RBP28.1■■■□□ 2.09
CCDC61-205ENST00000596161 JCADQ9P266 1359 aa28.1■■■□□ 2.09
CCDC61-205ENST00000596161 PPIP5K1Q6PFW1 1433 aa28.09■■■□□ 2.09
CCDC61-205ENST00000596161 PXDNQ92626 1479 aa28.09■■■□□ 2.09
CCDC61-205ENST00000596161 TMF1P82094 1093 aa28.09■■■□□ 2.09
CCDC61-205ENST00000596161 PUS7Q96PZ0 661 aaKnown RBP28.09■■■□□ 2.09
CCDC61-205ENST00000596161 PLEKHG3A1L390 1219 aa28.08■■■□□ 2.09
CCDC61-205ENST00000596161 PSME1Q06323 249 aa28.08■■■□□ 2.09
CCDC61-205ENST00000596161 KRT28Q7Z3Y7 464 aa28.08■■■□□ 2.09
CCDC61-205ENST00000596161 HSPA5P11021 654 aaKnown RBP28.07■■■□□ 2.08
CCDC61-205ENST00000596161 XPCQ01831 940 aaPredicted RBP28.05■■■□□ 2.08
CCDC61-205ENST00000596161 POLR3AO14802 1390 aaPredicted RBP28.04■■■□□ 2.08
CCDC61-205ENST00000596161 CDCA8Q53HL2 280 aa28.04■■■□□ 2.08
CCDC61-205ENST00000596161 ACEP12821 1306 aa28.03■■■□□ 2.08
CCDC61-205ENST00000596161 CABP1Q9NZU7 370 aa28.03■■■□□ 2.08
CCDC61-205ENST00000596161 SHPRHQ149N8 1683 aa28.03■■■□□ 2.08
CCDC61-205ENST00000596161 SBNO1A3KN83 1393 aa28.01■■■□□ 2.07
CCDC61-205ENST00000596161 DISP3Q9P2K9 1392 aa28.01■■■□□ 2.07
CCDC61-205ENST00000596161 ZEB1P37275 1124 aaPredicted RBP27.99■■■□□ 2.07
CCDC61-205ENST00000596161 PNPLA6Q8IY17 1366 aa27.99■■■□□ 2.07
CCDC61-205ENST00000596161 SPATA31A6Q5VVP1 1343 aa27.98■■■□□ 2.07
CCDC61-205ENST00000596161 SPATA31A3Q5VYP0 1347 aa27.98■■■□□ 2.07
CCDC61-205ENST00000596161 TNS3Q68CZ2 1445 aa27.98■■■□□ 2.07
CCDC61-205ENST00000596161 NINLQ9Y2I6 1382 aa27.98■■■□□ 2.07
CCDC61-205ENST00000596161 TMC1Q8TDI8 760 aa27.96■■■□□ 2.07
CCDC61-205ENST00000596161 BRD4O60885 1362 aaPredicted RBP27.96■■■□□ 2.07
CCDC61-205ENST00000596161 ZNF692Q9BU19 519 aaPredicted RBP27.95■■■□□ 2.06
CCDC61-205ENST00000596161 TRPM3Q9HCF6 1732 aaPredicted RBP27.95■■■□□ 2.06
CCDC61-205ENST00000596161 ARHGEF10O15013 1369 aa27.94■■■□□ 2.06
CCDC61-205ENST00000596161 PAK3O75914 559 aaPredicted RBP27.92■■■□□ 2.06
CCDC61-205ENST00000596161 COL22A1Q8NFW1 1626 aaPredicted RBP27.92■■■□□ 2.06
CCDC61-205ENST00000596161 USP6P35125 1406 aa27.92■■■□□ 2.06
CCDC61-205ENST00000596161 LMOD2Q6P5Q4 547 aa27.91■■■□□ 2.06
CCDC61-205ENST00000596161 HDGFL2Q7Z4V5 671 aaPredicted RBP27.9■■■□□ 2.06
CCDC61-205ENST00000596161 SLC12A5Q9H2X9 1139 aa27.9■■■□□ 2.06
CCDC61-205ENST00000596161 TERF2IPQ9NYB0 399 aa27.9■■■□□ 2.06
CCDC61-205ENST00000596161 CPSF1Q10570 1443 aaKnown RBP27.9■■■□□ 2.06
CCDC61-205ENST00000596161 AKAP12Q02952 1782 aa27.89■■■□□ 2.06
CCDC61-205ENST00000596161 ALS2Q96Q42 1657 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms