RNA–Protein interactions for RNA: ENST00000595047.5

GTF2F1-205, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 5

Gene GTF2F1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-205ENST00000595047 NCOA3Q9Y6Q9 1424 aa25.62■■□□□ 1.69
GTF2F1-205ENST00000595047 ARHGEF28Q8N1W1 1705 aaKnown RBP25.6■■□□□ 1.69
GTF2F1-205ENST00000595047 TESK2Q96S53 571 aa25.58■■□□□ 1.69
GTF2F1-205ENST00000595047 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.69
GTF2F1-205ENST00000595047 SLC24A1O60721 1099 aa25.57■■□□□ 1.68
GTF2F1-205ENST00000595047 ADGRL3Q9HAR2 1447 aa25.56■■□□□ 1.68
GTF2F1-205ENST00000595047 MSH6P52701 1360 aa25.55■■□□□ 1.68
GTF2F1-205ENST00000595047 SBNO2Q9Y2G9 1366 aa25.55■■□□□ 1.68
GTF2F1-205ENST00000595047 WASLO00401 505 aaPredicted RBP25.54■■□□□ 1.68
GTF2F1-205ENST00000595047 TMF1P82094 1093 aa25.54■■□□□ 1.68
GTF2F1-205ENST00000595047 EVC2Q86UK5 1308 aa25.54■■□□□ 1.68
GTF2F1-205ENST00000595047 ATF3P18847 181 aa25.53■■□□□ 1.68
GTF2F1-205ENST00000595047 CERKQ8TCT0 537 aa25.52■■□□□ 1.68
GTF2F1-205ENST00000595047 CDK19Q9BWU1 502 aa25.52■■□□□ 1.68
GTF2F1-205ENST00000595047 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.51■■□□□ 1.67
GTF2F1-205ENST00000595047 QRICH2Q9H0J4 1663 aa25.49■■□□□ 1.67
GTF2F1-205ENST00000595047 SRPK2P78362 688 aaKnown RBP25.49■■□□□ 1.67
GTF2F1-205ENST00000595047 CADPS2Q86UW7 1296 aa25.49■■□□□ 1.67
GTF2F1-205ENST00000595047 CABP2Q9NPB3 220 aa25.47■■□□□ 1.67
GTF2F1-205ENST00000595047 NUTM2FA1L443 756 aa25.46■■□□□ 1.67
GTF2F1-205ENST00000595047 DCCP43146 1447 aa25.46■■□□□ 1.67
GTF2F1-205ENST00000595047 CDCA8Q53HL2 280 aa25.45■■□□□ 1.67
GTF2F1-205ENST00000595047 DISP3Q9P2K9 1392 aa25.45■■□□□ 1.66
GTF2F1-205ENST00000595047 ADGRB2O60241 1585 aa25.45■■□□□ 1.66
GTF2F1-205ENST00000595047 NALCNQ8IZF0 1738 aa25.44■■□□□ 1.66
GTF2F1-205ENST00000595047 TULP4Q9NRJ4 1543 aa25.44■■□□□ 1.66
GTF2F1-205ENST00000595047 POLR3GLQ9BT43 218 aa25.43■■□□□ 1.66
GTF2F1-205ENST00000595047 CDC42BPGQ6DT37 1551 aa25.42■■□□□ 1.66
GTF2F1-205ENST00000595047 C11orf95C9JLR9 678 aaPredicted RBP25.42■■□□□ 1.66
GTF2F1-205ENST00000595047 NUDT16Q96DE0 195 aaKnown RBP25.42■■□□□ 1.66
GTF2F1-205ENST00000595047 PUS7Q96PZ0 661 aaKnown RBP25.42■■□□□ 1.66
GTF2F1-205ENST00000595047 IQSEC2Q5JU85 1478 aa25.41■■□□□ 1.66
GTF2F1-205ENST00000595047 XIRP1Q702N8 1843 aaKnown RBP25.4■■□□□ 1.66
GTF2F1-205ENST00000595047 SLAIN2Q9P270 581 aa25.4■■□□□ 1.66
GTF2F1-205ENST00000595047 TOM1O60784 492 aa25.39■■□□□ 1.65
GTF2F1-205ENST00000595047 PRR36Q9H6K5 1346 aa25.39■■□□□ 1.65
GTF2F1-205ENST00000595047 ATAD2Q6PL18 1390 aa25.37■■□□□ 1.65
GTF2F1-205ENST00000595047 MST1RQ04912 1400 aa25.37■■□□□ 1.65
GTF2F1-205ENST00000595047 ANKARQ7Z5J8 1434 aa25.37■■□□□ 1.65
GTF2F1-205ENST00000595047 UBAP1LF5GYI3 381 aa25.37■■□□□ 1.65
GTF2F1-205ENST00000595047 CCDC61Q9Y6R9 512 aa25.37■■□□□ 1.65
GTF2F1-205ENST00000595047 C1orf167Q5SNV9 1468 aa25.35■■□□□ 1.65
GTF2F1-205ENST00000595047 ZNF316A6NFI3 1004 aaPredicted RBP25.35■■□□□ 1.65
GTF2F1-205ENST00000595047 ESCO1Q5FWF5 840 aa25.35■■□□□ 1.65
GTF2F1-205ENST00000595047 KIF7Q2M1P5 1343 aa25.35■■□□□ 1.65
GTF2F1-205ENST00000595047 TMC1Q8TDI8 760 aa25.34■■□□□ 1.65
GTF2F1-205ENST00000595047 ORAI2Q96SN7 254 aa25.33■■□□□ 1.65
GTF2F1-205ENST00000595047 CABP1Q9NZU7 370 aa25.32■■□□□ 1.64
GTF2F1-205ENST00000595047 WASHC2AQ641Q2 1341 aa25.32■■□□□ 1.64
GTF2F1-205ENST00000595047 CCDC7Q96M83 1385 aa25.32■■□□□ 1.64
GTF2F1-205ENST00000595047 ATP7BP35670 1465 aa25.32■■□□□ 1.64
GTF2F1-205ENST00000595047 FMN2Q9NZ56 1722 aa25.32■■□□□ 1.64
GTF2F1-205ENST00000595047 PHF8Q9UPP1 1060 aa25.31■■□□□ 1.64
GTF2F1-205ENST00000595047 PPIP5K1Q6PFW1 1433 aa25.3■■□□□ 1.64
GTF2F1-205ENST00000595047 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
GTF2F1-205ENST00000595047 PLEKHG3A1L390 1219 aa25.29■■□□□ 1.64
GTF2F1-205ENST00000595047 PIP4K2BP78356 416 aa25.29■■□□□ 1.64
GTF2F1-205ENST00000595047 SLC12A5Q9H2X9 1139 aa25.29■■□□□ 1.64
GTF2F1-205ENST00000595047 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
GTF2F1-205ENST00000595047 BRINP3Q76B58 766 aa25.28■■□□□ 1.64
GTF2F1-205ENST00000595047 NGDNQ8NEJ9 315 aaKnown RBP25.27■■□□□ 1.64
GTF2F1-205ENST00000595047 USP32Q8NFA0 1604 aa25.25■■□□□ 1.63
GTF2F1-205ENST00000595047 NINLQ9Y2I6 1382 aa25.25■■□□□ 1.63
GTF2F1-205ENST00000595047 ACEP12821 1306 aa25.23■■□□□ 1.63
GTF2F1-205ENST00000595047 FOXO3O43524 673 aa25.22■■□□□ 1.63
GTF2F1-205ENST00000595047 HDGFL2Q7Z4V5 671 aaPredicted RBP25.22■■□□□ 1.63
GTF2F1-205ENST00000595047 TERF2IPQ9NYB0 399 aa25.22■■□□□ 1.63
GTF2F1-205ENST00000595047 PSME1Q06323 249 aa25.19■■□□□ 1.62
GTF2F1-205ENST00000595047 ZNF692Q9BU19 519 aaPredicted RBP25.19■■□□□ 1.62
GTF2F1-205ENST00000595047 DDX17Q92841 729 aaKnown RBP25.18■■□□□ 1.62
GTF2F1-205ENST00000595047 POLR3AO14802 1390 aaPredicted RBP25.18■■□□□ 1.62
GTF2F1-205ENST00000595047 NPHP3Q7Z494 1330 aa25.18■■□□□ 1.62
GTF2F1-205ENST00000595047 PANK3Q9H999 370 aa25.18■■□□□ 1.62
GTF2F1-205ENST00000595047 ANKRD36BQ8N2N9 1353 aa25.17■■□□□ 1.62
GTF2F1-205ENST00000595047 TOPAZ1Q8N9V7 1692 aa25.16■■□□□ 1.62
GTF2F1-205ENST00000595047 XPCQ01831 940 aaPredicted RBP25.15■■□□□ 1.62
GTF2F1-205ENST00000595047 KRT28Q7Z3Y7 464 aa25.15■■□□□ 1.62
GTF2F1-205ENST00000595047 CPSF1Q10570 1443 aaKnown RBP25.15■■□□□ 1.62
GTF2F1-205ENST00000595047 A0A1W2PP64 1363 aa25.14■■□□□ 1.62
GTF2F1-205ENST00000595047 KTN1Q86UP2 1357 aaKnown RBP25.14■■□□□ 1.62
GTF2F1-205ENST00000595047 ITSN1Q15811 1721 aa25.14■■□□□ 1.61
GTF2F1-205ENST00000595047 DDX10Q13206 875 aaKnown RBP25.14■■□□□ 1.61
GTF2F1-205ENST00000595047 RGPD8O14715 1765 aaPredicted RBP25.13■■□□□ 1.61
GTF2F1-205ENST00000595047 CD163L1Q9NR16 1453 aa25.13■■□□□ 1.61
GTF2F1-205ENST00000595047 KIF1AQ12756 1690 aa25.12■■□□□ 1.61
GTF2F1-205ENST00000595047 ROBO1Q9Y6N7 1651 aa25.11■■□□□ 1.61
GTF2F1-205ENST00000595047 PAK3O75914 559 aaPredicted RBP25.1■■□□□ 1.61
GTF2F1-205ENST00000595047 CARD14Q9BXL6 1004 aa25.1■■□□□ 1.61
GTF2F1-205ENST00000595047 USP6P35125 1406 aa25.1■■□□□ 1.61
GTF2F1-205ENST00000595047 MYOM1P52179 1685 aa25.09■■□□□ 1.61
GTF2F1-205ENST00000595047 SOS2Q07890 1332 aaPredicted RBP25.08■■□□□ 1.61
GTF2F1-205ENST00000595047 BRD4O60885 1362 aaPredicted RBP25.06■■□□□ 1.6
GTF2F1-205ENST00000595047 TTC21BQ7Z4L5 1316 aa25.06■■□□□ 1.6
GTF2F1-205ENST00000595047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.06■■□□□ 1.6
GTF2F1-205ENST00000595047 FBXO41Q8TF61 875 aa25.06■■□□□ 1.6
GTF2F1-205ENST00000595047 EDC4Q6P2E9 1401 aaKnown RBP25.06■■□□□ 1.6
GTF2F1-205ENST00000595047 KNSTRNQ9Y448 316 aa25.05■■□□□ 1.6
GTF2F1-205ENST00000595047 NSD3Q9BZ95 1437 aa25.05■■□□□ 1.6
GTF2F1-205ENST00000595047 PXDNQ92626 1479 aa25.04■■□□□ 1.6
GTF2F1-205ENST00000595047 SBNO1A3KN83 1393 aa25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms