RNA–Protein interactions for RNA: ENST00000594417.1

ARHGEF1-208, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-208ENST00000594417 DHX57Q6P158 1386 aaKnown RBP20.35■□□□□ 0.85
ARHGEF1-208ENST00000594417 SIRT1Q96EB6 747 aa20.35■□□□□ 0.85
ARHGEF1-208ENST00000594417 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
ARHGEF1-208ENST00000594417 C8orf37Q96NL8 207 aa20.34■□□□□ 0.85
ARHGEF1-208ENST00000594417 PNPLA6Q8IY17 1366 aa20.34■□□□□ 0.85
ARHGEF1-208ENST00000594417 SOS2Q07890 1332 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF1-208ENST00000594417 ADAMTS2O95450 1211 aa20.33■□□□□ 0.85
ARHGEF1-208ENST00000594417 YTHDC2Q9H6S0 1430 aaKnown RBP20.33■□□□□ 0.84
ARHGEF1-208ENST00000594417 NALCNQ8IZF0 1738 aa20.33■□□□□ 0.84
ARHGEF1-208ENST00000594417 AFF2P51816 1311 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 NPHP3Q7Z494 1330 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 FOXO3O43524 673 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 RXRBP28702 533 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 DCAF11Q8TEB1 546 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 TECPR2O15040 1411 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 SETD1AO15047 1707 aaKnown RBP20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 PLEKHH1Q9ULM0 1364 aa20.32■□□□□ 0.84
ARHGEF1-208ENST00000594417 NGLY1Q96IV0 654 aa20.31■□□□□ 0.84
ARHGEF1-208ENST00000594417 POGKQ9P215 609 aa20.31■□□□□ 0.84
ARHGEF1-208ENST00000594417 SAFB2Q14151 953 aaKnown RBP eCLIP20.3■□□□□ 0.84
ARHGEF1-208ENST00000594417 XPCQ01831 940 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF1-208ENST00000594417 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
ARHGEF1-208ENST00000594417 SHPRHQ149N8 1683 aa20.29■□□□□ 0.84
ARHGEF1-208ENST00000594417 STAC3Q96MF2 364 aa20.28■□□□□ 0.84
ARHGEF1-208ENST00000594417 MYOM2P54296 1465 aa20.27■□□□□ 0.84
ARHGEF1-208ENST00000594417 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
ARHGEF1-208ENST00000594417 NHSL1Q5SYE7 1610 aa20.27■□□□□ 0.83
ARHGEF1-208ENST00000594417 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
ARHGEF1-208ENST00000594417 TRAK1Q9UPV9 953 aa20.25■□□□□ 0.83
ARHGEF1-208ENST00000594417 CDC42BPGQ6DT37 1551 aa20.24■□□□□ 0.83
ARHGEF1-208ENST00000594417 KRT28Q7Z3Y7 464 aa20.22■□□□□ 0.83
ARHGEF1-208ENST00000594417 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
ARHGEF1-208ENST00000594417 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
ARHGEF1-208ENST00000594417 PSME1Q06323 249 aa20.21■□□□□ 0.83
ARHGEF1-208ENST00000594417 USP21Q9UK80 565 aa20.21■□□□□ 0.83
ARHGEF1-208ENST00000594417 RBM6P78332 1123 aaKnown RBP20.2■□□□□ 0.82
ARHGEF1-208ENST00000594417 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
ARHGEF1-208ENST00000594417 MINK1Q8N4C8 1332 aaPredicted RBP20.17■□□□□ 0.82
ARHGEF1-208ENST00000594417 HAP1P54257 671 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 LMOD2Q6P5Q4 547 aa20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 FNBP4Q8N3X1 1017 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 TRPC5Q9UL62 973 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 SPATA31A3Q5VYP0 1347 aa20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 PXDNQ92626 1479 aa20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 LAMC1P11047 1609 aa20.16■□□□□ 0.82
ARHGEF1-208ENST00000594417 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
ARHGEF1-208ENST00000594417 PMFBP1Q8TBY8 1022 aa20.15■□□□□ 0.82
ARHGEF1-208ENST00000594417 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
ARHGEF1-208ENST00000594417 UPF1Q92900 1129 aaKnown RBP eCLIP20.13■□□□□ 0.81
ARHGEF1-208ENST00000594417 DLC1Q96QB1 1528 aa20.12■□□□□ 0.81
ARHGEF1-208ENST00000594417 WASLO00401 505 aaPredicted RBP20.12■□□□□ 0.81
ARHGEF1-208ENST00000594417 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
ARHGEF1-208ENST00000594417 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
ARHGEF1-208ENST00000594417 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
ARHGEF1-208ENST00000594417 ANKARQ7Z5J8 1434 aa20.09■□□□□ 0.81
ARHGEF1-208ENST00000594417 NGDNQ8NEJ9 315 aaKnown RBP20.08■□□□□ 0.81
ARHGEF1-208ENST00000594417 CABLES1Q8TDN4 633 aa20.08■□□□□ 0.81
ARHGEF1-208ENST00000594417 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
ARHGEF1-208ENST00000594417 FMN2Q9NZ56 1722 aa20.07■□□□□ 0.8
ARHGEF1-208ENST00000594417 SBNO1A3KN83 1393 aa20.07■□□□□ 0.8
ARHGEF1-208ENST00000594417 TNS3Q68CZ2 1445 aa20.05■□□□□ 0.8
ARHGEF1-208ENST00000594417 ARHGEF10O15013 1369 aa20.05■□□□□ 0.8
ARHGEF1-208ENST00000594417 RGS12O14924 1447 aa20.04■□□□□ 0.8
ARHGEF1-208ENST00000594417 PAK3O75914 559 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-208ENST00000594417 UNC5CLQ8IV45 518 aa20.04■□□□□ 0.8
ARHGEF1-208ENST00000594417 GJD4Q96KN9 370 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-208ENST00000594417 COL22A1Q8NFW1 1626 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-208ENST00000594417 KIF1AQ12756 1690 aa20.03■□□□□ 0.8
ARHGEF1-208ENST00000594417 PRR36Q9H6K5 1346 aa20.03■□□□□ 0.8
ARHGEF1-208ENST00000594417 NBPF1Q3BBV0 1214 aa20.03■□□□□ 0.8
ARHGEF1-208ENST00000594417 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
ARHGEF1-208ENST00000594417 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
ARHGEF1-208ENST00000594417 ATRNO75882 1429 aa20.02■□□□□ 0.8
ARHGEF1-208ENST00000594417 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
ARHGEF1-208ENST00000594417 BCL9LQ86UU0 1499 aa20.02■□□□□ 0.8
ARHGEF1-208ENST00000594417 L3MBTL2Q969R5 705 aa20■□□□□ 0.79
ARHGEF1-208ENST00000594417 SIN3AQ96ST3 1273 aa20■□□□□ 0.79
ARHGEF1-208ENST00000594417 CCDC9Q9Y3X0 531 aaKnown RBP20■□□□□ 0.79
ARHGEF1-208ENST00000594417 ATAD2Q6PL18 1390 aa19.98■□□□□ 0.79
ARHGEF1-208ENST00000594417 TULP4Q9NRJ4 1543 aa19.97■□□□□ 0.79
ARHGEF1-208ENST00000594417 ADGRB2O60241 1585 aa19.97■□□□□ 0.79
ARHGEF1-208ENST00000594417 FAM83GA6ND36 823 aa19.97■□□□□ 0.79
ARHGEF1-208ENST00000594417 CCDC61Q9Y6R9 512 aa19.97■□□□□ 0.79
ARHGEF1-208ENST00000594417 SRPK2P78362 688 aaKnown RBP19.95■□□□□ 0.78
ARHGEF1-208ENST00000594417 CENPJQ9HC77 1338 aaPredicted RBP19.95■□□□□ 0.78
ARHGEF1-208ENST00000594417 SLIT2O94813 1529 aa19.94■□□□□ 0.78
ARHGEF1-208ENST00000594417 VPS72Q15906 364 aa19.94■□□□□ 0.78
ARHGEF1-208ENST00000594417 NBPF8Q3BBV2 869 aa19.92■□□□□ 0.78
ARHGEF1-208ENST00000594417 USP32Q8NFA0 1604 aa19.91■□□□□ 0.78
ARHGEF1-208ENST00000594417 PLEKHG3A1L390 1219 aa19.91■□□□□ 0.78
ARHGEF1-208ENST00000594417 BTG4Q9NY30 223 aa19.91■□□□□ 0.78
ARHGEF1-208ENST00000594417 ACEP12821 1306 aa19.91■□□□□ 0.78
ARHGEF1-208ENST00000594417 A0A0G2JS52 829 aa19.9■□□□□ 0.78
ARHGEF1-208ENST00000594417 MYT1Q01538 1121 aa19.9■□□□□ 0.78
ARHGEF1-208ENST00000594417 SEPT12Q8IYM1 358 aa19.9■□□□□ 0.78
ARHGEF1-208ENST00000594417 CABP2Q9NPB3 220 aa19.9■□□□□ 0.78
ARHGEF1-208ENST00000594417 RALGAPBQ86X10 1494 aa19.9■□□□□ 0.78
ARHGEF1-208ENST00000594417 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
ARHGEF1-208ENST00000594417 NUTM2GQ5VZR2 741 aa19.89■□□□□ 0.77
ARHGEF1-208ENST00000594417 CCDC125Q86Z20 511 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms