RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
SIN3B-204ENST00000594372 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
SIN3B-204ENST00000594372 BRWD3Q6RI45 1802 aa18.57■□□□□ 0.56
SIN3B-204ENST00000594372 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
SIN3B-204ENST00000594372 PXDNQ92626 1479 aa18.56■□□□□ 0.56
SIN3B-204ENST00000594372 VGFO15240 615 aaPredicted RBP18.55■□□□□ 0.56
SIN3B-204ENST00000594372 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
SIN3B-204ENST00000594372 STK26Q9P289 416 aa18.55■□□□□ 0.56
SIN3B-204ENST00000594372 ATRNO75882 1429 aa18.55■□□□□ 0.56
SIN3B-204ENST00000594372 MYOM2P54296 1465 aa18.54■□□□□ 0.56
SIN3B-204ENST00000594372 SLC4A1APQ9BWU0 796 aaKnown RBP18.54■□□□□ 0.56
SIN3B-204ENST00000594372 ATAD2Q6PL18 1390 aa18.54■□□□□ 0.56
SIN3B-204ENST00000594372 ADGRF5Q8IZF2 1346 aa18.53■□□□□ 0.56
SIN3B-204ENST00000594372 HFM1A2PYH4 1435 aa18.53■□□□□ 0.56
SIN3B-204ENST00000594372 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
SIN3B-204ENST00000594372 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
SIN3B-204ENST00000594372 TRPC5Q9UL62 973 aaPredicted RBP18.53■□□□□ 0.56
SIN3B-204ENST00000594372 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
SIN3B-204ENST00000594372 FOXO3O43524 673 aa18.52■□□□□ 0.56
SIN3B-204ENST00000594372 PLEKHG5O94827 1062 aa18.52■□□□□ 0.56
SIN3B-204ENST00000594372 KNDC1Q76NI1 1749 aa18.52■□□□□ 0.55
SIN3B-204ENST00000594372 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
SIN3B-204ENST00000594372 FNBP4Q8N3X1 1017 aaPredicted RBP18.51■□□□□ 0.55
SIN3B-204ENST00000594372 BCL9LQ86UU0 1499 aa18.51■□□□□ 0.55
SIN3B-204ENST00000594372 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
SIN3B-204ENST00000594372 TMEM132EQ6IEE7 984 aa18.5■□□□□ 0.55
SIN3B-204ENST00000594372 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.49■□□□□ 0.55
SIN3B-204ENST00000594372 GLI3P10071 1580 aa18.49■□□□□ 0.55
SIN3B-204ENST00000594372 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
SIN3B-204ENST00000594372 NPHP3Q7Z494 1330 aa18.48■□□□□ 0.55
SIN3B-204ENST00000594372 ABCA3Q99758 1704 aa18.46■□□□□ 0.55
SIN3B-204ENST00000594372 PLCH1Q4KWH8 1693 aa18.46■□□□□ 0.55
SIN3B-204ENST00000594372 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
SIN3B-204ENST00000594372 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
SIN3B-204ENST00000594372 SPATA31E1Q6ZUB1 1445 aa18.43■□□□□ 0.54
SIN3B-204ENST00000594372 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
SIN3B-204ENST00000594372 LRPPRCP42704 1394 aaKnown RBP18.42■□□□□ 0.54
SIN3B-204ENST00000594372 CCDC144AA2RUR9 1427 aa18.42■□□□□ 0.54
SIN3B-204ENST00000594372 GJD4Q96KN9 370 aaPredicted RBP18.42■□□□□ 0.54
SIN3B-204ENST00000594372 TECPR2O15040 1411 aa18.41■□□□□ 0.54
SIN3B-204ENST00000594372 CABLES1Q8TDN4 633 aa18.41■□□□□ 0.54
SIN3B-204ENST00000594372 ZRANB1Q9UGI0 708 aa18.4■□□□□ 0.54
SIN3B-204ENST00000594372 SLIT2O94813 1529 aa18.39■□□□□ 0.54
SIN3B-204ENST00000594372 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.53
SIN3B-204ENST00000594372 PIK3C2GO75747 1445 aa18.39■□□□□ 0.53
SIN3B-204ENST00000594372 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.53
SIN3B-204ENST00000594372 SPATA31A3Q5VYP0 1347 aa18.38■□□□□ 0.53
SIN3B-204ENST00000594372 KRT28Q7Z3Y7 464 aa18.37■□□□□ 0.53
SIN3B-204ENST00000594372 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
SIN3B-204ENST00000594372 UNC5CLQ8IV45 518 aa18.37■□□□□ 0.53
SIN3B-204ENST00000594372 ABCC11Q96J66 1382 aa18.36■□□□□ 0.53
SIN3B-204ENST00000594372 MPHOSPH9Q99550 1183 aa18.36■□□□□ 0.53
SIN3B-204ENST00000594372 NWD2Q9ULI1 1742 aa18.35■□□□□ 0.53
SIN3B-204ENST00000594372 LMOD2Q6P5Q4 547 aa18.35■□□□□ 0.53
SIN3B-204ENST00000594372 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
SIN3B-204ENST00000594372 NRAPQ86VF7 1730 aa18.34■□□□□ 0.53
SIN3B-204ENST00000594372 TNS3Q68CZ2 1445 aa18.33■□□□□ 0.53
SIN3B-204ENST00000594372 HAP1P54257 671 aaPredicted RBP18.33■□□□□ 0.52
SIN3B-204ENST00000594372 CFAP70Q5T0N1 1121 aa18.33■□□□□ 0.52
SIN3B-204ENST00000594372 SEPT12Q8IYM1 358 aa18.32■□□□□ 0.52
SIN3B-204ENST00000594372 PHF8Q9UPP1 1060 aa18.32■□□□□ 0.52
SIN3B-204ENST00000594372 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
SIN3B-204ENST00000594372 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
SIN3B-204ENST00000594372 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
SIN3B-204ENST00000594372 BLMP54132 1417 aaPredicted RBP18.31■□□□□ 0.52
SIN3B-204ENST00000594372 NRXN1Q9ULB1 1477 aa18.29■□□□□ 0.52
SIN3B-204ENST00000594372 PRAM1Q96QH2 718 aa18.29■□□□□ 0.52
SIN3B-204ENST00000594372 CCDC125Q86Z20 511 aa18.28■□□□□ 0.52
SIN3B-204ENST00000594372 ALS2Q96Q42 1657 aa18.28■□□□□ 0.52
SIN3B-204ENST00000594372 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.52
SIN3B-204ENST00000594372 C14orf93Q9H972 538 aaKnown RBP18.27■□□□□ 0.52
SIN3B-204ENST00000594372 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
SIN3B-204ENST00000594372 A0A0G2JS52 829 aa18.26■□□□□ 0.51
SIN3B-204ENST00000594372 MYT1Q01538 1121 aa18.26■□□□□ 0.51
SIN3B-204ENST00000594372 VPS72Q15906 364 aa18.26■□□□□ 0.51
SIN3B-204ENST00000594372 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
SIN3B-204ENST00000594372 FAM83GA6ND36 823 aa18.25■□□□□ 0.51
SIN3B-204ENST00000594372 PSME1Q06323 249 aa18.25■□□□□ 0.51
SIN3B-204ENST00000594372 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
SIN3B-204ENST00000594372 DHX57Q6P158 1386 aaKnown RBP18.24■□□□□ 0.51
SIN3B-204ENST00000594372 ADGRB2O60241 1585 aa18.23■□□□□ 0.51
SIN3B-204ENST00000594372 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
SIN3B-204ENST00000594372 KRT27Q7Z3Y8 459 aa18.23■□□□□ 0.51
SIN3B-204ENST00000594372 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
SIN3B-204ENST00000594372 COL14A1Q05707 1796 aaKnown RBP18.22■□□□□ 0.51
SIN3B-204ENST00000594372 SBNO1A3KN83 1393 aa18.22■□□□□ 0.51
SIN3B-204ENST00000594372 POGKQ9P215 609 aa18.22■□□□□ 0.51
SIN3B-204ENST00000594372 RGPD1P0DJD0 1748 aa18.22■□□□□ 0.51
SIN3B-204ENST00000594372 LRP5O75197 1615 aa18.22■□□□□ 0.51
SIN3B-204ENST00000594372 ADGRB1O14514 1584 aa18.21■□□□□ 0.51
SIN3B-204ENST00000594372 TNS1Q9HBL0 1735 aaKnown RBP18.21■□□□□ 0.51
SIN3B-204ENST00000594372 SF3B2Q13435 895 aaKnown RBP18.21■□□□□ 0.51
SIN3B-204ENST00000594372 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
SIN3B-204ENST00000594372 PRR36Q9H6K5 1346 aa18.21■□□□□ 0.51
SIN3B-204ENST00000594372 ARHGEF10O15013 1369 aa18.2■□□□□ 0.5
SIN3B-204ENST00000594372 DLC1Q96QB1 1528 aa18.2■□□□□ 0.5
SIN3B-204ENST00000594372 BTG4Q9NY30 223 aa18.2■□□□□ 0.5
SIN3B-204ENST00000594372 SIRT1Q96EB6 747 aa18.19■□□□□ 0.5
SIN3B-204ENST00000594372 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
SIN3B-204ENST00000594372 ANKARQ7Z5J8 1434 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms