RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 NUTM2BA6NNL0 878 aaPredicted RBP24.81■■□□□ 1.56
LTBP4-209ENST00000594116 NUTM2EB1AL46 878 aaPredicted RBP24.81■■□□□ 1.56
LTBP4-209ENST00000594116 NUTM2AQ8IVF1 878 aaPredicted RBP24.81■■□□□ 1.56
LTBP4-209ENST00000594116 LRPPRCP42704 1394 aaKnown RBP24.8■■□□□ 1.56
LTBP4-209ENST00000594116 ORAI2Q96SN7 254 aa24.79■■□□□ 1.56
LTBP4-209ENST00000594116 SOS2Q07890 1332 aaPredicted RBP24.78■■□□□ 1.56
LTBP4-209ENST00000594116 ABCC11Q96J66 1382 aa24.78■■□□□ 1.56
LTBP4-209ENST00000594116 MYOM2P54296 1465 aa24.77■■□□□ 1.56
LTBP4-209ENST00000594116 NRXN1Q9ULB1 1477 aa24.77■■□□□ 1.56
LTBP4-209ENST00000594116 STK26Q9P289 416 aa24.74■■□□□ 1.55
LTBP4-209ENST00000594116 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
LTBP4-209ENST00000594116 COL22A1Q8NFW1 1626 aaPredicted RBP24.73■■□□□ 1.55
LTBP4-209ENST00000594116 AFF2P51816 1311 aa24.73■■□□□ 1.55
LTBP4-209ENST00000594116 CLSPNQ9HAW4 1339 aa24.73■■□□□ 1.55
LTBP4-209ENST00000594116 CDK12Q9NYV4 1490 aaPredicted RBP24.72■■□□□ 1.55
LTBP4-209ENST00000594116 TMEM132EQ6IEE7 984 aa24.72■■□□□ 1.55
LTBP4-209ENST00000594116 WAPLQ7Z5K2 1190 aa24.71■■□□□ 1.55
LTBP4-209ENST00000594116 FMN2Q9NZ56 1722 aa24.71■■□□□ 1.55
LTBP4-209ENST00000594116 PLEKHH1Q9ULM0 1364 aa24.69■■□□□ 1.54
LTBP4-209ENST00000594116 NPHP3Q7Z494 1330 aa24.69■■□□□ 1.54
LTBP4-209ENST00000594116 RXRBP28702 533 aa24.69■■□□□ 1.54
LTBP4-209ENST00000594116 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
LTBP4-209ENST00000594116 C14orf93Q9H972 538 aaKnown RBP24.69■■□□□ 1.54
LTBP4-209ENST00000594116 PXDNQ92626 1479 aa24.69■■□□□ 1.54
LTBP4-209ENST00000594116 ESCO1Q5FWF5 840 aa24.68■■□□□ 1.54
LTBP4-209ENST00000594116 C8orf37Q96NL8 207 aa24.68■■□□□ 1.54
LTBP4-209ENST00000594116 SIRT1Q96EB6 747 aa24.67■■□□□ 1.54
LTBP4-209ENST00000594116 KIF1AQ12756 1690 aa24.66■■□□□ 1.54
LTBP4-209ENST00000594116 CFAP70Q5T0N1 1121 aa24.63■■□□□ 1.53
LTBP4-209ENST00000594116 ADAMTS2O95450 1211 aa24.62■■□□□ 1.53
LTBP4-209ENST00000594116 DLC1Q96QB1 1528 aa24.61■■□□□ 1.53
LTBP4-209ENST00000594116 FOXO3O43524 673 aa24.61■■□□□ 1.53
LTBP4-209ENST00000594116 NGLY1Q96IV0 654 aa24.61■■□□□ 1.53
LTBP4-209ENST00000594116 MARF1Q9Y4F3 1742 aaKnown RBP24.61■■□□□ 1.53
LTBP4-209ENST00000594116 NUTM2FA1L443 756 aa24.6■■□□□ 1.53
LTBP4-209ENST00000594116 RBM6P78332 1123 aaKnown RBP24.59■■□□□ 1.53
LTBP4-209ENST00000594116 QTRT2Q9H974 415 aaKnown RBP24.59■■□□□ 1.53
LTBP4-209ENST00000594116 ADGRB1O14514 1584 aa24.59■■□□□ 1.53
LTBP4-209ENST00000594116 RGPD8O14715 1765 aaPredicted RBP24.58■■□□□ 1.53
LTBP4-209ENST00000594116 SIN3AQ96ST3 1273 aa24.58■■□□□ 1.53
LTBP4-209ENST00000594116 RGS12O14924 1447 aa24.58■■□□□ 1.53
LTBP4-209ENST00000594116 UPF1Q92900 1129 aaKnown RBP eCLIP24.57■■□□□ 1.52
LTBP4-209ENST00000594116 ADGRB2O60241 1585 aa24.56■■□□□ 1.52
LTBP4-209ENST00000594116 XPCQ01831 940 aaPredicted RBP24.56■■□□□ 1.52
LTBP4-209ENST00000594116 FNBP4Q8N3X1 1017 aaPredicted RBP24.55■■□□□ 1.52
LTBP4-209ENST00000594116 PRAM1Q96QH2 718 aa24.54■■□□□ 1.52
LTBP4-209ENST00000594116 USP21Q9UK80 565 aa24.53■■□□□ 1.52
LTBP4-209ENST00000594116 STAC3Q96MF2 364 aa24.52■■□□□ 1.52
LTBP4-209ENST00000594116 SPATA31A3Q5VYP0 1347 aa24.51■■□□□ 1.51
LTBP4-209ENST00000594116 ATRNO75882 1429 aa24.51■■□□□ 1.51
LTBP4-209ENST00000594116 TRPC5Q9UL62 973 aaPredicted RBP24.5■■□□□ 1.51
LTBP4-209ENST00000594116 ANKARQ7Z5J8 1434 aa24.5■■□□□ 1.51
LTBP4-209ENST00000594116 USP32Q8NFA0 1604 aa24.5■■□□□ 1.51
LTBP4-209ENST00000594116 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
LTBP4-209ENST00000594116 DCAF11Q8TEB1 546 aa24.49■■□□□ 1.51
LTBP4-209ENST00000594116 POGKQ9P215 609 aa24.49■■□□□ 1.51
LTBP4-209ENST00000594116 PHF8Q9UPP1 1060 aa24.49■■□□□ 1.51
LTBP4-209ENST00000594116 SAFB2Q14151 953 aaKnown RBP eCLIP24.48■■□□□ 1.51
LTBP4-209ENST00000594116 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.48■■□□□ 1.51
LTBP4-209ENST00000594116 BCL9LQ86UU0 1499 aa24.47■■□□□ 1.51
LTBP4-209ENST00000594116 TNS3Q68CZ2 1445 aa24.47■■□□□ 1.51
LTBP4-209ENST00000594116 KRT28Q7Z3Y7 464 aa24.47■■□□□ 1.51
LTBP4-209ENST00000594116 KDM2AQ9Y2K7 1162 aa24.46■■□□□ 1.51
LTBP4-209ENST00000594116 PSME1Q06323 249 aa24.44■■□□□ 1.5
LTBP4-209ENST00000594116 TRAK1Q9UPV9 953 aa24.44■■□□□ 1.5
LTBP4-209ENST00000594116 SBNO1A3KN83 1393 aa24.43■■□□□ 1.5
LTBP4-209ENST00000594116 TONSLQ96HA7 1378 aa24.43■■□□□ 1.5
LTBP4-209ENST00000594116 ABCA3Q99758 1704 aa24.43■■□□□ 1.5
LTBP4-209ENST00000594116 EIF3AQ14152 1382 aaKnown RBP24.42■■□□□ 1.5
LTBP4-209ENST00000594116 ARHGEF28Q8N1W1 1705 aaKnown RBP24.42■■□□□ 1.5
LTBP4-209ENST00000594116 TIMELESSQ9UNS1 1208 aa24.42■■□□□ 1.5
LTBP4-209ENST00000594116 SLIT2O94813 1529 aa24.41■■□□□ 1.5
LTBP4-209ENST00000594116 TULP4Q9NRJ4 1543 aa24.41■■□□□ 1.5
LTBP4-209ENST00000594116 ARHGEF10O15013 1369 aa24.4■■□□□ 1.5
LTBP4-209ENST00000594116 TRPM3Q9HCF6 1732 aaPredicted RBP24.39■■□□□ 1.5
LTBP4-209ENST00000594116 ATAD2Q6PL18 1390 aa24.39■■□□□ 1.49
LTBP4-209ENST00000594116 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
LTBP4-209ENST00000594116 L3MBTL2Q969R5 705 aa24.38■■□□□ 1.49
LTBP4-209ENST00000594116 MINK1Q8N4C8 1332 aaPredicted RBP24.37■■□□□ 1.49
LTBP4-209ENST00000594116 HIRIP3Q9BW71 556 aaPredicted RBP24.37■■□□□ 1.49
LTBP4-209ENST00000594116 NWD2Q9ULI1 1742 aa24.36■■□□□ 1.49
LTBP4-209ENST00000594116 PMFBP1Q8TBY8 1022 aa24.36■■□□□ 1.49
LTBP4-209ENST00000594116 EP400Q96L91 3159 aa24.36■■□□□ 1.49
LTBP4-209ENST00000594116 PLCH1Q4KWH8 1693 aa24.36■■□□□ 1.49
LTBP4-209ENST00000594116 ALS2Q96Q42 1657 aa24.35■■□□□ 1.49
LTBP4-209ENST00000594116 WASLO00401 505 aaPredicted RBP24.35■■□□□ 1.49
LTBP4-209ENST00000594116 UNC5CLQ8IV45 518 aa24.35■■□□□ 1.49
LTBP4-209ENST00000594116 GJD4Q96KN9 370 aaPredicted RBP24.35■■□□□ 1.49
LTBP4-209ENST00000594116 ITSN1Q15811 1721 aa24.35■■□□□ 1.49
LTBP4-209ENST00000594116 PRR36Q9H6K5 1346 aa24.35■■□□□ 1.49
LTBP4-209ENST00000594116 GLI3P10071 1580 aa24.34■■□□□ 1.49
LTBP4-209ENST00000594116 HAP1P54257 671 aaPredicted RBP24.33■■□□□ 1.49
LTBP4-209ENST00000594116 RALGAPBQ86X10 1494 aa24.32■■□□□ 1.48
LTBP4-209ENST00000594116 CABLES1Q8TDN4 633 aa24.32■■□□□ 1.48
LTBP4-209ENST00000594116 GPRASP1Q5JY77 1395 aa24.31■■□□□ 1.48
LTBP4-209ENST00000594116 LMOD2Q6P5Q4 547 aa24.3■■□□□ 1.48
LTBP4-209ENST00000594116 ATP7BP35670 1465 aa24.3■■□□□ 1.48
LTBP4-209ENST00000594116 CRYBG1Q9Y4K1 1723 aa24.27■■□□□ 1.48
LTBP4-209ENST00000594116 TOPAZ1Q8N9V7 1692 aa24.26■■□□□ 1.47
LTBP4-209ENST00000594116 TRPM1Q7Z4N2 1603 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms