RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 SYT17Q9BSW7 474 aa5.27□□□□□ -1.57
VRK3-204ENST00000593912 CCDC9Q9Y3X0 531 aaKnown RBP5.27□□□□□ -1.57
VRK3-204ENST00000593912 TNS2Q63HR2 1409 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 FAM83GA6ND36 823 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 ONECUT3O60422 494 aaPredicted RBP5.26□□□□□ -1.57
VRK3-204ENST00000593912 TRIM37O94972 964 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 ZBTB7AO95365 584 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 FAM98CQ17RN3 349 aaKnown RBP5.26□□□□□ -1.57
VRK3-204ENST00000593912 WWC3Q9ULE0 1092 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 DLC1Q96QB1 1528 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 PLEKHG1Q9ULL1 1385 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 TMEM131LA2VDJ0 1609 aa5.26□□□□□ -1.57
VRK3-204ENST00000593912 ZFYVE9O95405 1425 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 ADAMTS13Q76LX8 1427 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 ADGRL3Q9HAR2 1447 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 APBA3O96018 575 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 PTGER2P43116 358 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 VPS72Q15906 364 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 NBPF8Q3BBV2 869 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 NBPF14Q5TI25 921 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 ORAI2Q96SN7 254 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 ATF5Q9Y2D1 282 aaPredicted RBP5.25□□□□□ -1.57
VRK3-204ENST00000593912 USP32Q8NFA0 1604 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 C1orf167Q5SNV9 1468 aa5.25□□□□□ -1.57
VRK3-204ENST00000593912 ATP10DQ9P241 1426 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 EHBP1L1Q8N3D4 1523 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 XRN1Q8IZH2 1706 aaKnown RBP5.24□□□□□ -1.57
VRK3-204ENST00000593912 XPCQ01831 940 aaPredicted RBP5.24□□□□□ -1.57
VRK3-204ENST00000593912 GPR162Q16538 588 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 FAM161AQ3B820 660 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 ZNF526Q8TF50 670 aaPredicted RBP5.24□□□□□ -1.57
VRK3-204ENST00000593912 AMOTL2Q9Y2J4 779 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 TBX22Q9Y458 520 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 GCC2Q8IWJ2 1684 aa5.24□□□□□ -1.57
VRK3-204ENST00000593912 NOS1P29475 1434 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 RIMS2Q9UQ26 1411 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 WDR90Q96KV7 1748 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 NWD2Q9ULI1 1742 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 HTRA3P83110 453 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 PELP1Q8IZL8 1130 aaKnown RBP5.23□□□□□ -1.57
VRK3-204ENST00000593912 ANO8Q9HCE9 1232 aaPredicted RBP5.23□□□□□ -1.57
VRK3-204ENST00000593912 PARD3Q8TEW0 1356 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 CCNB3Q8WWL7 1395 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 CCDC18Q5T9S5 1454 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 CCDC141Q6ZP82 1450 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 PTPN23Q9H3S7 1636 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 EIF2AK4Q9P2K8 1649 aaKnown RBP5.23□□□□□ -1.57
VRK3-204ENST00000593912 ARHGAP31Q2M1Z3 1444 aa5.23□□□□□ -1.57
VRK3-204ENST00000593912 PXDNQ92626 1479 aa5.22□□□□□ -1.57
VRK3-204ENST00000593912 PLEKHG5O94827 1062 aa5.22□□□□□ -1.57
VRK3-204ENST00000593912 APLP1P51693 650 aa5.22□□□□□ -1.57
VRK3-204ENST00000593912 CSRNP3Q8WYN3 585 aa5.22□□□□□ -1.57
VRK3-204ENST00000593912 RNF39Q9H2S5 420 aa5.22□□□□□ -1.57
VRK3-204ENST00000593912 NRAPQ86VF7 1730 aa5.22□□□□□ -1.57
VRK3-204ENST00000593912 THSD7AQ9UPZ6 1657 aa5.21□□□□□ -1.57
VRK3-204ENST00000593912 GPBP1L1Q9HC44 474 aaPredicted RBP5.21□□□□□ -1.58
VRK3-204ENST00000593912 MTUS2Q5JR59 1369 aa5.2□□□□□ -1.58
VRK3-204ENST00000593912 CROCC2H7BZ55 1655 aa5.2□□□□□ -1.58
VRK3-204ENST00000593912 ABCA3Q99758 1704 aa5.2□□□□□ -1.58
VRK3-204ENST00000593912 RPRD2Q5VT52 1461 aaKnown RBP5.2□□□□□ -1.58
VRK3-204ENST00000593912 PIK3R4Q99570 1358 aa5.19□□□□□ -1.58
VRK3-204ENST00000593912 JMYQ8N9B5 988 aa5.19□□□□□ -1.58
VRK3-204ENST00000593912 CABLES1Q8TDN4 633 aa5.19□□□□□ -1.58
VRK3-204ENST00000593912 KLRG1Q96E93 195 aa5.19□□□□□ -1.58
VRK3-204ENST00000593912 ADGRL2O95490 1459 aa5.19□□□□□ -1.58
VRK3-204ENST00000593912 TNRC18O15417 2968 aaPredicted RBP5.18□□□□□ -1.58
VRK3-204ENST00000593912 KIF3CO14782 793 aa5.18□□□□□ -1.58
VRK3-204ENST00000593912 KLHL34Q8N239 644 aa5.18□□□□□ -1.58
VRK3-204ENST00000593912 SGIP1Q9BQI5 828 aa5.18□□□□□ -1.58
VRK3-204ENST00000593912 NRXN3Q9Y4C0 1643 aa5.18□□□□□ -1.58
VRK3-204ENST00000593912 KIAA1210Q9ULL0 1709 aa5.17□□□□□ -1.58
VRK3-204ENST00000593912 CASKIN1Q8WXD9 1431 aa5.17□□□□□ -1.58
VRK3-204ENST00000593912 FOXO3O43524 673 aa5.17□□□□□ -1.58
VRK3-204ENST00000593912 HSPA1AP0DMV8 641 aaKnown RBP5.17□□□□□ -1.58
VRK3-204ENST00000593912 HSPA1BP0DMV9 641 aaKnown RBP5.17□□□□□ -1.58
VRK3-204ENST00000593912 YBX3P16989 372 aaKnown RBP eCLIP5.17□□□□□ -1.58
VRK3-204ENST00000593912 FAM196AQ6ZSG2 479 aa5.17□□□□□ -1.58
VRK3-204ENST00000593912 ARXQ96QS3 562 aa5.17□□□□□ -1.58
VRK3-204ENST00000593912 NPHP3Q7Z494 1330 aa5.17□□□□□ -1.58
VRK3-204ENST00000593912 ADCY9O60503 1353 aa5.16□□□□□ -1.58
VRK3-204ENST00000593912 ARHGEF5Q12774 1597 aa5.16□□□□□ -1.58
VRK3-204ENST00000593912 CHGAP10645 457 aaKnown RBP5.16□□□□□ -1.58
VRK3-204ENST00000593912 HAP1P54257 671 aaPredicted RBP5.16□□□□□ -1.58
VRK3-204ENST00000593912 NLGN2Q8NFZ4 835 aa5.16□□□□□ -1.58
VRK3-204ENST00000593912 NEXMIFQ5QGS0 1516 aa5.16□□□□□ -1.58
VRK3-204ENST00000593912 AATKQ6ZMQ8 1374 aa5.16□□□□□ -1.58
VRK3-204ENST00000593912 MAP3K5Q99683 1374 aa5.16□□□□□ -1.58
VRK3-204ENST00000593912 ABCC5O15440 1437 aa5.15□□□□□ -1.58
VRK3-204ENST00000593912 ESCO1Q5FWF5 840 aa5.15□□□□□ -1.59
VRK3-204ENST00000593912 METP08581 1390 aa5.15□□□□□ -1.59
VRK3-204ENST00000593912 FYCO1Q9BQS8 1478 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 RGPD3A6NKT7 1758 aaPredicted RBP5.14□□□□□ -1.59
VRK3-204ENST00000593912 RGPD4Q7Z3J3 1758 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 BCL11BQ9C0K0 894 aaPredicted RBP5.14□□□□□ -1.59
VRK3-204ENST00000593912 MTFR1LQ9H019 292 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 BTG4Q9NY30 223 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 SPATA31A5Q5VU36 1347 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 SPATA31A3Q5VYP0 1347 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 SPATA31A7Q8IWB4 1347 aa5.14□□□□□ -1.59
VRK3-204ENST00000593912 TSPY4P0CV99 314 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms