RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 ADAMTS2O95450 1211 aa33.73■■■□□ 2.99
SSBP4-203ENST00000593641 UPF1Q92900 1129 aaKnown RBP eCLIP33.73■■■□□ 2.99
SSBP4-203ENST00000593641 KNDC1Q76NI1 1749 aa33.72■■■□□ 2.99
SSBP4-203ENST00000593641 TECPR2O15040 1411 aa33.71■■■□□ 2.99
SSBP4-203ENST00000593641 NGLY1Q96IV0 654 aa33.71■■■□□ 2.99
SSBP4-203ENST00000593641 STK26Q9P289 416 aa33.71■■■□□ 2.99
SSBP4-203ENST00000593641 ESCO1Q5FWF5 840 aa33.7■■■□□ 2.99
SSBP4-203ENST00000593641 QTRT2Q9H974 415 aaKnown RBP33.7■■■□□ 2.99
SSBP4-203ENST00000593641 ACIN1Q9UKV3 1341 aaKnown RBP33.7■■■□□ 2.99
SSBP4-203ENST00000593641 LRPPRCP42704 1394 aaKnown RBP33.7■■■□□ 2.98
SSBP4-203ENST00000593641 NPHP3Q7Z494 1330 aa33.69■■■□□ 2.98
SSBP4-203ENST00000593641 PIK3C2GO75747 1445 aa33.69■■■□□ 2.98
SSBP4-203ENST00000593641 RBM6P78332 1123 aaKnown RBP33.68■■■□□ 2.98
SSBP4-203ENST00000593641 COL22A1Q8NFW1 1626 aaPredicted RBP33.68■■■□□ 2.98
SSBP4-203ENST00000593641 RGS12O14924 1447 aa33.65■■■□□ 2.98
SSBP4-203ENST00000593641 ABCC11Q96J66 1382 aa33.65■■■□□ 2.98
SSBP4-203ENST00000593641 WAPLQ7Z5K2 1190 aa33.64■■■□□ 2.98
SSBP4-203ENST00000593641 TMEM132EQ6IEE7 984 aa33.63■■■□□ 2.97
SSBP4-203ENST00000593641 PXDNQ92626 1479 aa33.61■■■□□ 2.97
SSBP4-203ENST00000593641 YTHDC2Q9H6S0 1430 aaKnown RBP33.6■■■□□ 2.97
SSBP4-203ENST00000593641 NUTM2FA1L443 756 aa33.59■■■□□ 2.97
SSBP4-203ENST00000593641 USP21Q9UK80 565 aa33.59■■■□□ 2.97
SSBP4-203ENST00000593641 FMN2Q9NZ56 1722 aa33.59■■■□□ 2.97
SSBP4-203ENST00000593641 PLEKHH1Q9ULM0 1364 aa33.59■■■□□ 2.97
SSBP4-203ENST00000593641 FOXO3O43524 673 aa33.58■■■□□ 2.97
SSBP4-203ENST00000593641 MYOM2P54296 1465 aa33.57■■■□□ 2.97
SSBP4-203ENST00000593641 MARF1Q9Y4F3 1742 aaKnown RBP33.56■■■□□ 2.96
SSBP4-203ENST00000593641 XPCQ01831 940 aaPredicted RBP33.55■■■□□ 2.96
SSBP4-203ENST00000593641 TRPC5Q9UL62 973 aaPredicted RBP33.55■■■□□ 2.96
SSBP4-203ENST00000593641 KIF1AQ12756 1690 aa33.55■■■□□ 2.96
SSBP4-203ENST00000593641 FNBP4Q8N3X1 1017 aaPredicted RBP33.54■■■□□ 2.96
SSBP4-203ENST00000593641 NRXN1Q9ULB1 1477 aa33.51■■■□□ 2.96
SSBP4-203ENST00000593641 C14orf93Q9H972 538 aaKnown RBP33.51■■■□□ 2.95
SSBP4-203ENST00000593641 SIRT1Q96EB6 747 aa33.49■■■□□ 2.95
SSBP4-203ENST00000593641 DHX57Q6P158 1386 aaKnown RBP33.48■■■□□ 2.95
SSBP4-203ENST00000593641 ATRNO75882 1429 aa33.47■■■□□ 2.95
SSBP4-203ENST00000593641 RAB3GAP2Q9H2M9 1393 aa33.47■■■□□ 2.95
SSBP4-203ENST00000593641 CFAP70Q5T0N1 1121 aa33.46■■■□□ 2.95
SSBP4-203ENST00000593641 RGPD8O14715 1765 aaPredicted RBP33.46■■■□□ 2.95
SSBP4-203ENST00000593641 ATAD2Q6PL18 1390 aa33.44■■■□□ 2.94
SSBP4-203ENST00000593641 SPATA31A3Q5VYP0 1347 aa33.41■■■□□ 2.94
SSBP4-203ENST00000593641 BCL9LQ86UU0 1499 aa33.41■■■□□ 2.94
SSBP4-203ENST00000593641 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.39■■■□□ 2.94
SSBP4-203ENST00000593641 KRT28Q7Z3Y7 464 aa33.38■■■□□ 2.93
SSBP4-203ENST00000593641 PRAM1Q96QH2 718 aa33.38■■■□□ 2.93
SSBP4-203ENST00000593641 SAFB2Q14151 953 aaKnown RBP eCLIP33.37■■■□□ 2.93
SSBP4-203ENST00000593641 PHF8Q9UPP1 1060 aa33.37■■■□□ 2.93
SSBP4-203ENST00000593641 DLC1Q96QB1 1528 aa33.37■■■□□ 2.93
SSBP4-203ENST00000593641 POGKQ9P215 609 aa33.35■■■□□ 2.93
SSBP4-203ENST00000593641 USP32Q8NFA0 1604 aa33.35■■■□□ 2.93
SSBP4-203ENST00000593641 PSME1Q06323 249 aa33.34■■■□□ 2.93
SSBP4-203ENST00000593641 TNS3Q68CZ2 1445 aa33.34■■■□□ 2.93
SSBP4-203ENST00000593641 HAP1P54257 671 aaPredicted RBP33.32■■■□□ 2.92
SSBP4-203ENST00000593641 GJD4Q96KN9 370 aaPredicted RBP33.31■■■□□ 2.92
SSBP4-203ENST00000593641 EP400Q96L91 3159 aa33.3■■■□□ 2.92
SSBP4-203ENST00000593641 ADGRB1O14514 1584 aa33.3■■■□□ 2.92
SSBP4-203ENST00000593641 ADGRB2O60241 1585 aa33.3■■■□□ 2.92
SSBP4-203ENST00000593641 SLIT2O94813 1529 aa33.29■■■□□ 2.92
SSBP4-203ENST00000593641 UNC5CLQ8IV45 518 aa33.29■■■□□ 2.92
SSBP4-203ENST00000593641 ANKARQ7Z5J8 1434 aa33.28■■■□□ 2.92
SSBP4-203ENST00000593641 SBNO1A3KN83 1393 aa33.27■■■□□ 2.92
SSBP4-203ENST00000593641 TRAK1Q9UPV9 953 aa33.25■■■□□ 2.91
SSBP4-203ENST00000593641 ARHGEF10O15013 1369 aa33.24■■■□□ 2.91
SSBP4-203ENST00000593641 LMOD2Q6P5Q4 547 aa33.24■■■□□ 2.91
SSBP4-203ENST00000593641 KDM2AQ9Y2K7 1162 aa33.24■■■□□ 2.91
SSBP4-203ENST00000593641 ABCA3Q99758 1704 aa33.24■■■□□ 2.91
SSBP4-203ENST00000593641 DCAF11Q8TEB1 546 aa33.23■■■□□ 2.91
SSBP4-203ENST00000593641 RALGAPBQ86X10 1494 aa33.23■■■□□ 2.91
SSBP4-203ENST00000593641 GLI3P10071 1580 aa33.22■■■□□ 2.91
SSBP4-203ENST00000593641 EIF3AQ14152 1382 aaKnown RBP33.21■■■□□ 2.91
SSBP4-203ENST00000593641 PLCH1Q4KWH8 1693 aa33.21■■■□□ 2.91
SSBP4-203ENST00000593641 PLEKHG5O94827 1062 aa33.21■■■□□ 2.91
SSBP4-203ENST00000593641 PMFBP1Q8TBY8 1022 aa33.21■■■□□ 2.91
SSBP4-203ENST00000593641 NWD2Q9ULI1 1742 aa33.21■■■□□ 2.91
SSBP4-203ENST00000593641 CABLES1Q8TDN4 633 aa33.2■■■□□ 2.91
SSBP4-203ENST00000593641 STAC3Q96MF2 364 aa33.2■■■□□ 2.91
SSBP4-203ENST00000593641 HIRIP3Q9BW71 556 aaPredicted RBP33.19■■■□□ 2.9
SSBP4-203ENST00000593641 CCDC125Q86Z20 511 aa33.18■■■□□ 2.9
SSBP4-203ENST00000593641 MINK1Q8N4C8 1332 aaPredicted RBP33.18■■■□□ 2.9
SSBP4-203ENST00000593641 TULP4Q9NRJ4 1543 aa33.16■■■□□ 2.9
SSBP4-203ENST00000593641 HRCP23327 699 aa33.15■■■□□ 2.9
SSBP4-203ENST00000593641 TRPM3Q9HCF6 1732 aaPredicted RBP33.15■■■□□ 2.9
SSBP4-203ENST00000593641 BRWD3Q6RI45 1802 aa33.14■■■□□ 2.9
SSBP4-203ENST00000593641 GPRASP1Q5JY77 1395 aa33.13■■■□□ 2.89
SSBP4-203ENST00000593641 VPS72Q15906 364 aa33.12■■■□□ 2.89
SSBP4-203ENST00000593641 CCDC9Q9Y3X0 531 aaKnown RBP33.11■■■□□ 2.89
SSBP4-203ENST00000593641 ARHGEF28Q8N1W1 1705 aaKnown RBP33.11■■■□□ 2.89
SSBP4-203ENST00000593641 WASLO00401 505 aaPredicted RBP33.1■■■□□ 2.89
SSBP4-203ENST00000593641 ALS2Q96Q42 1657 aa33.1■■■□□ 2.89
SSBP4-203ENST00000593641 PRR36Q9H6K5 1346 aa33.08■■■□□ 2.89
SSBP4-203ENST00000593641 SRCAPQ6ZRS2 3230 aa33.08■■■□□ 2.89
SSBP4-203ENST00000593641 ITSN1Q15811 1721 aa33.08■■■□□ 2.89
SSBP4-203ENST00000593641 ZRANB1Q9UGI0 708 aa33.07■■■□□ 2.88
SSBP4-203ENST00000593641 SEPT12Q8IYM1 358 aa33.05■■■□□ 2.88
SSBP4-203ENST00000593641 BLMP54132 1417 aaPredicted RBP33.04■■■□□ 2.88
SSBP4-203ENST00000593641 FAM83GA6ND36 823 aa33.04■■■□□ 2.88
SSBP4-203ENST00000593641 NGDNQ8NEJ9 315 aaKnown RBP33.04■■■□□ 2.88
SSBP4-203ENST00000593641 NRAPQ86VF7 1730 aa33.03■■■□□ 2.88
SSBP4-203ENST00000593641 COL14A1Q05707 1796 aaKnown RBP33.02■■■□□ 2.88
SSBP4-203ENST00000593641 PAK3O75914 559 aaPredicted RBP32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms