RNA–Protein interactions for RNA: ENST00000593619.1

LINC02246-203, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

Gene LINC02246, Length 599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-203ENST00000593619 PRDM9Q9NQV7 894 aa13.04□□□□□ -0.32
LINC02246-203ENST00000593619 SPTLC1O15269 473 aa13.03□□□□□ -0.32
LINC02246-203ENST00000593619 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.33
LINC02246-203ENST00000593619 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.02□□□□□ -0.33
LINC02246-203ENST00000593619 LIMD1Q9UGP4 676 aa13.02□□□□□ -0.33
LINC02246-203ENST00000593619 GJA5P36382 358 aa13.01□□□□□ -0.33
LINC02246-203ENST00000593619 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
LINC02246-203ENST00000593619 PCDHB15Q9Y5E8 787 aa13.01□□□□□ -0.33
LINC02246-203ENST00000593619 RNF223E7ERA6 249 aa13□□□□□ -0.33
LINC02246-203ENST00000593619 MSS51Q4VC12 460 aa13□□□□□ -0.33
LINC02246-203ENST00000593619 USB1Q9BQ65 265 aaKnown RBP13□□□□□ -0.33
LINC02246-203ENST00000593619 PPEF1O14829 653 aaPredicted RBP12.98□□□□□ -0.33
LINC02246-203ENST00000593619 GGCXP38435 758 aa12.98□□□□□ -0.33
LINC02246-203ENST00000593619 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
LINC02246-203ENST00000593619 CLK2P49760 499 aaKnown RBP12.97□□□□□ -0.33
LINC02246-203ENST00000593619 RSPH6AQ9H0K4 717 aa12.97□□□□□ -0.33
LINC02246-203ENST00000593619 POLR3EQ9NVU0 708 aa12.97□□□□□ -0.33
LINC02246-203ENST00000593619 CSPP1Q1MSJ5 1256 aa12.96□□□□□ -0.33
LINC02246-203ENST00000593619 SH3D19Q5HYK7 790 aa12.96□□□□□ -0.33
LINC02246-203ENST00000593619 RETREG3Q86VR2 466 aa12.96□□□□□ -0.33
LINC02246-203ENST00000593619 IL27Q8NEV9 243 aa12.96□□□□□ -0.33
LINC02246-203ENST00000593619 CABLES1Q8TDN4 633 aa12.95□□□□□ -0.34
LINC02246-203ENST00000593619 MTMR2Q13614 643 aa12.94□□□□□ -0.34
LINC02246-203ENST00000593619 QPCTQ16769 361 aa12.94□□□□□ -0.34
LINC02246-203ENST00000593619 MMP16P51512 607 aa12.93□□□□□ -0.34
LINC02246-203ENST00000593619 TUSC1Q2TAM9 212 aa12.93□□□□□ -0.34
LINC02246-203ENST00000593619 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
LINC02246-203ENST00000593619 DXOO77932 396 aaKnown RBP12.92□□□□□ -0.34
LINC02246-203ENST00000593619 HRCP23327 699 aa12.92□□□□□ -0.34
LINC02246-203ENST00000593619 PLA2G2CQ5R387 149 aa12.92□□□□□ -0.34
LINC02246-203ENST00000593619 SKIV2LQ15477 1246 aaKnown RBP12.91□□□□□ -0.34
LINC02246-203ENST00000593619 PRPF38BQ5VTL8 546 aaKnown RBP12.91□□□□□ -0.34
LINC02246-203ENST00000593619 EMID1Q96A84 441 aaPredicted RBP12.91□□□□□ -0.34
LINC02246-203ENST00000593619 ZBTB3Q9H5J0 574 aa12.91□□□□□ -0.34
LINC02246-203ENST00000593619 RGS20O76081 388 aa12.9□□□□□ -0.34
LINC02246-203ENST00000593619 PROCA1Q8NCQ7 364 aaPredicted RBP12.9□□□□□ -0.34
LINC02246-203ENST00000593619 FCF1Q9Y324 198 aaKnown RBP12.9□□□□□ -0.34
LINC02246-203ENST00000593619 CFAP99D6REC4 459 aa12.89□□□□□ -0.35
LINC02246-203ENST00000593619 LILRB3O75022 631 aa12.89□□□□□ -0.35
LINC02246-203ENST00000593619 JUNDP17535 347 aa12.89□□□□□ -0.35
LINC02246-203ENST00000593619 FBXO31Q5XUX0 539 aaPredicted RBP12.89□□□□□ -0.35
LINC02246-203ENST00000593619 PRR7Q8TB68 274 aa12.89□□□□□ -0.35
LINC02246-203ENST00000593619 SPDYE5A6NIY4 337 aa12.88□□□□□ -0.35
LINC02246-203ENST00000593619 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
LINC02246-203ENST00000593619 PRKD2Q9BZL6 878 aa12.87□□□□□ -0.35
LINC02246-203ENST00000593619 RTL5Q5HYW3 569 aaPredicted RBP12.85□□□□□ -0.35
LINC02246-203ENST00000593619 GOPCQ9HD26 462 aa12.84□□□□□ -0.35
LINC02246-203ENST00000593619 NUTM2BA6NNL0 878 aaPredicted RBP12.83□□□□□ -0.36
LINC02246-203ENST00000593619 NUTM2EB1AL46 878 aaPredicted RBP12.83□□□□□ -0.36
LINC02246-203ENST00000593619 NUTM2DQ5VT03 806 aaPredicted RBP12.83□□□□□ -0.36
LINC02246-203ENST00000593619 LIAT1Q6ZQX7 453 aa12.83□□□□□ -0.36
LINC02246-203ENST00000593619 NUTM2AQ8IVF1 878 aaPredicted RBP12.83□□□□□ -0.36
LINC02246-203ENST00000593619 DESI1Q6ICB0 168 aa12.81□□□□□ -0.36
LINC02246-203ENST00000593619 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
LINC02246-203ENST00000593619 SLC19A1P41440 591 aa12.8□□□□□ -0.36
LINC02246-203ENST00000593619 NUDT12Q9BQG2 462 aa12.79□□□□□ -0.36
LINC02246-203ENST00000593619 PTPRNQ16849 979 aa12.78□□□□□ -0.36
LINC02246-203ENST00000593619 PPP2R2DQ66LE6 453 aa12.78□□□□□ -0.36
LINC02246-203ENST00000593619 PCMTD1Q96MG8 357 aaPredicted RBP12.78□□□□□ -0.36
LINC02246-203ENST00000593619 ATP1B4Q9UN42 357 aaPredicted RBP12.78□□□□□ -0.36
LINC02246-203ENST00000593619 PER1O15534 1290 aaPredicted RBP12.77□□□□□ -0.37
LINC02246-203ENST00000593619 CCDC24Q8N4L8 307 aa12.77□□□□□ -0.37
LINC02246-203ENST00000593619 CCNYL3P0C7X3 344 aa12.76□□□□□ -0.37
LINC02246-203ENST00000593619 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
LINC02246-203ENST00000593619 LYPD8Q6UX82 237 aa12.76□□□□□ -0.37
LINC02246-203ENST00000593619 TSC1Q92574 1164 aa12.76□□□□□ -0.37
LINC02246-203ENST00000593619 RPIAP49247 311 aa12.74□□□□□ -0.37
LINC02246-203ENST00000593619 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
LINC02246-203ENST00000593619 HELBQ8NG08 1087 aaPredicted RBP12.72□□□□□ -0.37
LINC02246-203ENST00000593619 EVA1BQ9NVM1 165 aa12.72□□□□□ -0.37
LINC02246-203ENST00000593619 F12P00748 615 aaPredicted RBP12.71□□□□□ -0.37
LINC02246-203ENST00000593619 RFC5P40937 340 aa12.71□□□□□ -0.37
LINC02246-203ENST00000593619 TRIM32Q13049 653 aa12.71□□□□□ -0.37
LINC02246-203ENST00000593619 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
LINC02246-203ENST00000593619 ZNF697Q5TEC3 545 aa12.7□□□□□ -0.38
LINC02246-203ENST00000593619 ZNF598Q86UK7 904 aaKnown RBP12.7□□□□□ -0.38
LINC02246-203ENST00000593619 MAP10Q9P2G4 905 aa12.7□□□□□ -0.38
LINC02246-203ENST00000593619 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
LINC02246-203ENST00000593619 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
LINC02246-203ENST00000593619 TRIM67Q6ZTA4 783 aa12.68□□□□□ -0.38
LINC02246-203ENST00000593619 UNC93B1Q9H1C4 597 aa12.67□□□□□ -0.38
LINC02246-203ENST00000593619 AP1G2O75843 785 aa12.66□□□□□ -0.38
LINC02246-203ENST00000593619 LRRN4Q8WUT4 740 aa12.66□□□□□ -0.38
LINC02246-203ENST00000593619 CD2BP2O95400 341 aaKnown RBP12.65□□□□□ -0.38
LINC02246-203ENST00000593619 CTHP32929 405 aa12.65□□□□□ -0.38
LINC02246-203ENST00000593619 USP17L8P0C7I0 530 aa12.63□□□□□ -0.39
LINC02246-203ENST00000593619 SKOR1P84550 965 aa12.63□□□□□ -0.39
LINC02246-203ENST00000593619 PKD2L1Q9P0L9 805 aa12.63□□□□□ -0.39
LINC02246-203ENST00000593619 GDF9O60383 454 aa12.62□□□□□ -0.39
LINC02246-203ENST00000593619 IRX2Q9BZI1 471 aaPredicted RBP12.62□□□□□ -0.39
LINC02246-203ENST00000593619 HMX1Q9NP08 348 aaPredicted RBP12.61□□□□□ -0.39
LINC02246-203ENST00000593619 TNFRSF10AO00220 468 aa12.6□□□□□ -0.39
LINC02246-203ENST00000593619 LINC01559Q495D7 138 aa12.6□□□□□ -0.39
LINC02246-203ENST00000593619 FOXC1Q12948 553 aa12.59□□□□□ -0.39
LINC02246-203ENST00000593619 BAP1Q92560 729 aa12.59□□□□□ -0.39
LINC02246-203ENST00000593619 PDZRN3Q9UPQ7 1066 aa12.59□□□□□ -0.39
LINC02246-203ENST00000593619 WNT7BP56706 349 aa12.58□□□□□ -0.4
LINC02246-203ENST00000593619 SH3BP2P78314 561 aa12.58□□□□□ -0.4
LINC02246-203ENST00000593619 TMEM259Q4ZIN3 620 aa12.58□□□□□ -0.4
LINC02246-203ENST00000593619 GFRA3O60609 400 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms