RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
CACNA1A-213ENST00000593267 HSPA1LP34931 641 aa16.06■□□□□ 0.16
CACNA1A-213ENST00000593267 BCANQ96GW7 911 aa16.06■□□□□ 0.16
CACNA1A-213ENST00000593267 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-213ENST00000593267 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
CACNA1A-213ENST00000593267 DDX10Q13206 875 aaKnown RBP16.05■□□□□ 0.16
CACNA1A-213ENST00000593267 STK26Q9P289 416 aa16.05■□□□□ 0.16
CACNA1A-213ENST00000593267 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
CACNA1A-213ENST00000593267 PTCH1Q13635 1447 aa16.03■□□□□ 0.16
CACNA1A-213ENST00000593267 SIRT1Q96EB6 747 aa16.03■□□□□ 0.16
CACNA1A-213ENST00000593267 MED1Q15648 1581 aaPredicted RBP16.03■□□□□ 0.16
CACNA1A-213ENST00000593267 ADGRB2O60241 1585 aa16.02■□□□□ 0.16
CACNA1A-213ENST00000593267 NWD1Q149M9 1564 aa16.02■□□□□ 0.16
CACNA1A-213ENST00000593267 PRAM1Q96QH2 718 aa16.02■□□□□ 0.16
CACNA1A-213ENST00000593267 CDCA8Q53HL2 280 aa16.01■□□□□ 0.15
CACNA1A-213ENST00000593267 ROBO2Q9HCK4 1378 aa16■□□□□ 0.15
CACNA1A-213ENST00000593267 PLEKHH1Q9ULM0 1364 aa16■□□□□ 0.15
CACNA1A-213ENST00000593267 POGKQ9P215 609 aa15.99■□□□□ 0.15
CACNA1A-213ENST00000593267 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.99■□□□□ 0.15
CACNA1A-213ENST00000593267 PUS7Q96PZ0 661 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-213ENST00000593267 POLR3GLQ9BT43 218 aa15.97■□□□□ 0.15
CACNA1A-213ENST00000593267 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
CACNA1A-213ENST00000593267 WAPLQ7Z5K2 1190 aa15.96■□□□□ 0.15
CACNA1A-213ENST00000593267 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
CACNA1A-213ENST00000593267 AMOTL2Q9Y2J4 779 aa15.96■□□□□ 0.15
CACNA1A-213ENST00000593267 STRCP1A6NGW2 1772 aa15.95■□□□□ 0.14
CACNA1A-213ENST00000593267 SAFB2Q14151 953 aaKnown RBP eCLIP15.95■□□□□ 0.14
CACNA1A-213ENST00000593267 LRRC7Q96NW7 1537 aa15.94■□□□□ 0.14
CACNA1A-213ENST00000593267 MINK1Q8N4C8 1332 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-213ENST00000593267 NALCNQ8IZF0 1738 aa15.93■□□□□ 0.14
CACNA1A-213ENST00000593267 NKTRP30414 1462 aaKnown RBP15.92■□□□□ 0.14
CACNA1A-213ENST00000593267 ATAD2Q6PL18 1390 aa15.91■□□□□ 0.14
CACNA1A-213ENST00000593267 KCNA6P17658 529 aa15.91■□□□□ 0.14
CACNA1A-213ENST00000593267 TOPAZ1Q8N9V7 1692 aa15.91■□□□□ 0.14
CACNA1A-213ENST00000593267 NINLQ9Y2I6 1382 aa15.9■□□□□ 0.14
CACNA1A-213ENST00000593267 CDC42BPGQ6DT37 1551 aa15.89■□□□□ 0.13
CACNA1A-213ENST00000593267 MIER1Q8N108 512 aa15.89■□□□□ 0.13
CACNA1A-213ENST00000593267 FMN2Q9NZ56 1722 aa15.88■□□□□ 0.13
CACNA1A-213ENST00000593267 USP32Q8NFA0 1604 aa15.88■□□□□ 0.13
CACNA1A-213ENST00000593267 WASLO00401 505 aaPredicted RBP15.88■□□□□ 0.13
CACNA1A-213ENST00000593267 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
CACNA1A-213ENST00000593267 ATP7BP35670 1465 aa15.87■□□□□ 0.13
CACNA1A-213ENST00000593267 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
CACNA1A-213ENST00000593267 ITSN1Q15811 1721 aa15.87■□□□□ 0.13
CACNA1A-213ENST00000593267 PER1O15534 1290 aaPredicted RBP15.86■□□□□ 0.13
CACNA1A-213ENST00000593267 ANP32CO43423 234 aa15.86■□□□□ 0.13
CACNA1A-213ENST00000593267 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
CACNA1A-213ENST00000593267 PANK3Q9H999 370 aa15.86■□□□□ 0.13
CACNA1A-213ENST00000593267 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
CACNA1A-213ENST00000593267 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
CACNA1A-213ENST00000593267 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
CACNA1A-213ENST00000593267 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
CACNA1A-213ENST00000593267 XIRP1Q702N8 1843 aaKnown RBP15.82■□□□□ 0.12
CACNA1A-213ENST00000593267 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
CACNA1A-213ENST00000593267 MON2Q7Z3U7 1717 aa15.82■□□□□ 0.12
CACNA1A-213ENST00000593267 RGPD8O14715 1765 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 ANKARQ7Z5J8 1434 aa15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 KTN1Q86UP2 1357 aaKnown RBP15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 PRR36Q9H6K5 1346 aa15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 PRKRIP1Q9H875 184 aaPredicted RBP15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 NPC1L1Q9UHC9 1359 aa15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 NCOA3Q9Y6Q9 1424 aa15.81■□□□□ 0.12
CACNA1A-213ENST00000593267 PPIP5K1Q6PFW1 1433 aa15.8■□□□□ 0.12
CACNA1A-213ENST00000593267 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
CACNA1A-213ENST00000593267 TMC1Q8TDI8 760 aa15.8■□□□□ 0.12
CACNA1A-213ENST00000593267 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
CACNA1A-213ENST00000593267 CPSF1Q10570 1443 aaKnown RBP15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 NSD3Q9BZ95 1437 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 ANKRD26Q9UPS8 1709 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 CARD14Q9BXL6 1004 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 KNSTRNQ9Y448 316 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 NRKQ7Z2Y5 1582 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
CACNA1A-213ENST00000593267 AMER1Q5JTC6 1135 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-213ENST00000593267 PROSER2Q86WR7 435 aaPredicted RBP15.77■□□□□ 0.12
CACNA1A-213ENST00000593267 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
CACNA1A-213ENST00000593267 DCCP43146 1447 aa15.77■□□□□ 0.11
CACNA1A-213ENST00000593267 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
CACNA1A-213ENST00000593267 TERF2IPQ9NYB0 399 aa15.76■□□□□ 0.11
CACNA1A-213ENST00000593267 CABP1Q9NZU7 370 aa15.76■□□□□ 0.11
CACNA1A-213ENST00000593267 TMEM94Q12767 1356 aa15.75■□□□□ 0.11
CACNA1A-213ENST00000593267 RALBP1Q15311 655 aa15.74■□□□□ 0.11
CACNA1A-213ENST00000593267 HDGFL2Q7Z4V5 671 aaPredicted RBP15.74■□□□□ 0.11
CACNA1A-213ENST00000593267 NSD2O96028 1365 aa15.74■□□□□ 0.11
CACNA1A-213ENST00000593267 PLEKHG3A1L390 1219 aa15.73■□□□□ 0.11
CACNA1A-213ENST00000593267 RBM33Q96EV2 1170 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-213ENST00000593267 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
CACNA1A-213ENST00000593267 ROBO1Q9Y6N7 1651 aa15.73■□□□□ 0.11
CACNA1A-213ENST00000593267 RGS17Q9UGC6 210 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-213ENST00000593267 POLR3AO14802 1390 aaPredicted RBP15.72■□□□□ 0.11
CACNA1A-213ENST00000593267 CGNL1Q0VF96 1302 aa15.71■□□□□ 0.11
CACNA1A-213ENST00000593267 KIF1AQ12756 1690 aa15.71■□□□□ 0.11
CACNA1A-213ENST00000593267 CC2D1BQ5T0F9 858 aaKnown RBP15.71■□□□□ 0.11
CACNA1A-213ENST00000593267 MYBBP1AQ9BQG0 1328 aaKnown RBP15.7■□□□□ 0.1
CACNA1A-213ENST00000593267 NUTM2FA1L443 756 aa15.7■□□□□ 0.1
CACNA1A-213ENST00000593267 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
CACNA1A-213ENST00000593267 C19orf44Q9H6X5 657 aa15.7■□□□□ 0.1
CACNA1A-213ENST00000593267 USP6P35125 1406 aa15.69■□□□□ 0.1
CACNA1A-213ENST00000593267 ZNF692Q9BU19 519 aaPredicted RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms