RNA–Protein interactions for RNA: ENST00000593261.1

NEK8-208, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-208ENST00000593261 BLMP54132 1417 aaPredicted RBP8.87□□□□□ -0.99
NEK8-208ENST00000593261 PTCH1Q13635 1447 aa8.87□□□□□ -0.99
NEK8-208ENST00000593261 ADGRL2O95490 1459 aa8.86□□□□□ -0.99
NEK8-208ENST00000593261 MYOM2P54296 1465 aa8.86□□□□□ -0.99
NEK8-208ENST00000593261 METP08581 1390 aa8.86□□□□□ -0.99
NEK8-208ENST00000593261 SPHKAPQ2M3C7 1700 aa8.85□□□□□ -0.99
NEK8-208ENST00000593261 BCL9LQ86UU0 1499 aa8.85□□□□□ -0.99
NEK8-208ENST00000593261 PSDA5PKW4 1024 aaPredicted RBP8.85□□□□□ -0.99
NEK8-208ENST00000593261 NEUROD1Q13562 356 aa8.85□□□□□ -0.99
NEK8-208ENST00000593261 ANKRD50Q9ULJ7 1429 aa8.85□□□□□ -0.99
NEK8-208ENST00000593261 RALGAPBQ86X10 1494 aa8.84□□□□□ -0.99
NEK8-208ENST00000593261 FNBP4Q8N3X1 1017 aaPredicted RBP8.84□□□□□ -0.99
NEK8-208ENST00000593261 CCDC125Q86Z20 511 aa8.83□□□□□ -1
NEK8-208ENST00000593261 ORAI2Q96SN7 254 aa8.83□□□□□ -1
NEK8-208ENST00000593261 PLCH1Q4KWH8 1693 aa8.83□□□□□ -1
NEK8-208ENST00000593261 SOS2Q07890 1332 aaPredicted RBP8.82□□□□□ -1
NEK8-208ENST00000593261 PXDNQ92626 1479 aa8.82□□□□□ -1
NEK8-208ENST00000593261 NEXMIFQ5QGS0 1516 aa8.81□□□□□ -1
NEK8-208ENST00000593261 USP32Q8NFA0 1604 aa8.81□□□□□ -1
NEK8-208ENST00000593261 XPCQ01831 940 aaPredicted RBP8.81□□□□□ -1
NEK8-208ENST00000593261 GJD4Q96KN9 370 aaPredicted RBP8.81□□□□□ -1
NEK8-208ENST00000593261 RAB3GAP2Q9H2M9 1393 aa8.81□□□□□ -1
NEK8-208ENST00000593261 SF3B2Q13435 895 aaKnown RBP8.8□□□□□ -1
NEK8-208ENST00000593261 ABCA3Q99758 1704 aa8.8□□□□□ -1
NEK8-208ENST00000593261 CLTCL1P53675 1640 aa8.8□□□□□ -1
NEK8-208ENST00000593261 ROBO2Q9HCK4 1378 aa8.79□□□□□ -1
NEK8-208ENST00000593261 ZNF326Q5BKZ1 582 aaKnown RBP8.79□□□□□ -1
NEK8-208ENST00000593261 RGPD1P0DJD0 1748 aa8.79□□□□□ -1
NEK8-208ENST00000593261 CDC42BPGQ6DT37 1551 aa8.78□□□□□ -1
NEK8-208ENST00000593261 TNS1Q9HBL0 1735 aaKnown RBP8.78□□□□□ -1
NEK8-208ENST00000593261 ITGAEP38570 1179 aa8.78□□□□□ -1
NEK8-208ENST00000593261 FAM50AQ14320 339 aaKnown RBP8.78□□□□□ -1
NEK8-208ENST00000593261 MIER1Q8N108 512 aa8.78□□□□□ -1
NEK8-208ENST00000593261 SLIT2O94813 1529 aa8.78□□□□□ -1
NEK8-208ENST00000593261 PLEKHG5O94827 1062 aa8.77□□□□□ -1.01
NEK8-208ENST00000593261 PELP1Q8IZL8 1130 aaKnown RBP8.77□□□□□ -1.01
NEK8-208ENST00000593261 KIF1BO60333 1816 aa8.77□□□□□ -1.01
NEK8-208ENST00000593261 NWD2Q9ULI1 1742 aa8.77□□□□□ -1.01
NEK8-208ENST00000593261 A0A0G2JS52 829 aa8.76□□□□□ -1.01
NEK8-208ENST00000593261 MYT1Q01538 1121 aa8.76□□□□□ -1.01
NEK8-208ENST00000593261 SEPT12Q8IYM1 358 aa8.76□□□□□ -1.01
NEK8-208ENST00000593261 NPHP3Q7Z494 1330 aa8.76□□□□□ -1.01
NEK8-208ENST00000593261 YY1P25490 414 aa8.75□□□□□ -1.01
NEK8-208ENST00000593261 R3HDM1Q15032 1099 aaKnown RBP8.75□□□□□ -1.01
NEK8-208ENST00000593261 ESCO1Q5FWF5 840 aa8.75□□□□□ -1.01
NEK8-208ENST00000593261 UNC5CLQ8IV45 518 aa8.75□□□□□ -1.01
NEK8-208ENST00000593261 CCDC9Q9Y3X0 531 aaKnown RBP8.75□□□□□ -1.01
NEK8-208ENST00000593261 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
NEK8-208ENST00000593261 UTRNP46939 3433 aa8.74□□□□□ -1.01
NEK8-208ENST00000593261 NUTM2FA1L443 756 aa8.74□□□□□ -1.01
NEK8-208ENST00000593261 FOXO3O43524 673 aa8.74□□□□□ -1.01
NEK8-208ENST00000593261 GTF3C3Q9Y5Q9 886 aa8.74□□□□□ -1.01
NEK8-208ENST00000593261 NUP155O75694 1391 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 RGPD8O14715 1765 aaPredicted RBP8.73□□□□□ -1.01
NEK8-208ENST00000593261 KIF1AQ12756 1690 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 CAMTA1Q9Y6Y1 1673 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 BAG6P46379 1132 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 FAM182BQ5T319 152 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 KRT27Q7Z3Y8 459 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 FMN2Q9NZ56 1722 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 IFT172Q9UG01 1749 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 PPLO60437 1756 aa8.73□□□□□ -1.01
NEK8-208ENST00000593261 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
NEK8-208ENST00000593261 ADGRB2O60241 1585 aa8.72□□□□□ -1.01
NEK8-208ENST00000593261 HFM1A2PYH4 1435 aa8.71□□□□□ -1.01
NEK8-208ENST00000593261 NAIPQ13075 1403 aa8.71□□□□□ -1.01
NEK8-208ENST00000593261 PRAG1Q86YV5 1406 aa8.71□□□□□ -1.01
NEK8-208ENST00000593261 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
NEK8-208ENST00000593261 YTHDC1Q96MU7 727 aaKnown RBP8.71□□□□□ -1.02
NEK8-208ENST00000593261 NUP188Q5SRE5 1749 aa8.71□□□□□ -1.02
NEK8-208ENST00000593261 RREB1Q92766 1687 aa8.7□□□□□ -1.02
NEK8-208ENST00000593261 VPS72Q15906 364 aa8.7□□□□□ -1.02
NEK8-208ENST00000593261 CABLES1Q8TDN4 633 aa8.7□□□□□ -1.02
NEK8-208ENST00000593261 CCDC144AA2RUR9 1427 aa8.7□□□□□ -1.02
NEK8-208ENST00000593261 THSD7AQ9UPZ6 1657 aa8.69□□□□□ -1.02
NEK8-208ENST00000593261 CEP350Q5VT06 3117 aa8.69□□□□□ -1.02
NEK8-208ENST00000593261 FAM98CQ17RN3 349 aaKnown RBP8.69□□□□□ -1.02
NEK8-208ENST00000593261 TIMELESSQ9UNS1 1208 aa8.69□□□□□ -1.02
NEK8-208ENST00000593261 SPATA31A3Q5VYP0 1347 aa8.69□□□□□ -1.02
NEK8-208ENST00000593261 TNS3Q68CZ2 1445 aa8.69□□□□□ -1.02
NEK8-208ENST00000593261 LRPPRCP42704 1394 aaKnown RBP8.68□□□□□ -1.02
NEK8-208ENST00000593261 KNDC1Q76NI1 1749 aa8.68□□□□□ -1.02
NEK8-208ENST00000593261 DISP2A7MBM2 1401 aa8.67□□□□□ -1.02
NEK8-208ENST00000593261 ROCK1Q13464 1354 aa8.67□□□□□ -1.02
NEK8-208ENST00000593261 EZH2Q15910 746 aaKnown RBP8.67□□□□□ -1.02
NEK8-208ENST00000593261 COL14A1Q05707 1796 aaKnown RBP8.66□□□□□ -1.02
NEK8-208ENST00000593261 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
NEK8-208ENST00000593261 LMOD2Q6P5Q4 547 aa8.66□□□□□ -1.02
NEK8-208ENST00000593261 WAPLQ7Z5K2 1190 aa8.65□□□□□ -1.02
NEK8-208ENST00000593261 STK26Q9P289 416 aa8.65□□□□□ -1.02
NEK8-208ENST00000593261 CRYBG1Q9Y4K1 1723 aa8.65□□□□□ -1.03
NEK8-208ENST00000593261 TRPM3Q9HCF6 1732 aaPredicted RBP8.64□□□□□ -1.03
NEK8-208ENST00000593261 ONECUT3O60422 494 aaPredicted RBP8.64□□□□□ -1.03
NEK8-208ENST00000593261 KRT28Q7Z3Y7 464 aa8.64□□□□□ -1.03
NEK8-208ENST00000593261 SIN3AQ96ST3 1273 aa8.64□□□□□ -1.03
NEK8-208ENST00000593261 PPP1R1BQ9UD71 204 aaPredicted RBP8.64□□□□□ -1.03
NEK8-208ENST00000593261 NRKQ7Z2Y5 1582 aa8.64□□□□□ -1.03
NEK8-208ENST00000593261 ALS2Q96Q42 1657 aa8.63□□□□□ -1.03
NEK8-208ENST00000593261 SENP3-EIF4A1A0A087X0R7 540 aa8.63□□□□□ -1.03
NEK8-208ENST00000593261 FAM83GA6ND36 823 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms