RNA–Protein interactions for RNA: ENST00000593134.1

RDH13-222, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-222ENST00000593134 DDX10Q13206 875 aaKnown RBP12.47□□□□□ -0.41
RDH13-222ENST00000593134 POLR3GLQ9BT43 218 aa12.47□□□□□ -0.41
RDH13-222ENST00000593134 CABP2Q9NPB3 220 aa12.47□□□□□ -0.41
RDH13-222ENST00000593134 PTCH1Q13635 1447 aa12.45□□□□□ -0.42
RDH13-222ENST00000593134 WASLO00401 505 aaPredicted RBP12.45□□□□□ -0.42
RDH13-222ENST00000593134 CPS1P31327 1500 aa12.45□□□□□ -0.42
RDH13-222ENST00000593134 XRN1Q8IZH2 1706 aaKnown RBP12.45□□□□□ -0.42
RDH13-222ENST00000593134 EVC2Q86UK5 1308 aa12.44□□□□□ -0.42
RDH13-222ENST00000593134 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
RDH13-222ENST00000593134 TMEM94Q12767 1356 aa12.43□□□□□ -0.42
RDH13-222ENST00000593134 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
RDH13-222ENST00000593134 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
RDH13-222ENST00000593134 SRPK2P78362 688 aaKnown RBP12.43□□□□□ -0.42
RDH13-222ENST00000593134 TULP4Q9NRJ4 1543 aa12.42□□□□□ -0.42
RDH13-222ENST00000593134 PRR36Q9H6K5 1346 aa12.42□□□□□ -0.42
RDH13-222ENST00000593134 CHD2O14647 1828 aaKnown RBP12.42□□□□□ -0.42
RDH13-222ENST00000593134 SLC12A5Q9H2X9 1139 aa12.42□□□□□ -0.42
RDH13-222ENST00000593134 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.42□□□□□ -0.42
RDH13-222ENST00000593134 NWD1Q149M9 1564 aa12.41□□□□□ -0.42
RDH13-222ENST00000593134 CDCA8Q53HL2 280 aa12.41□□□□□ -0.42
RDH13-222ENST00000593134 C14orf37Q86TY3 774 aa12.41□□□□□ -0.42
RDH13-222ENST00000593134 NUDT16Q96DE0 195 aaKnown RBP12.41□□□□□ -0.42
RDH13-222ENST00000593134 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
RDH13-222ENST00000593134 KNDC1Q76NI1 1749 aa12.4□□□□□ -0.42
RDH13-222ENST00000593134 STRCP1A6NGW2 1772 aa12.4□□□□□ -0.42
RDH13-222ENST00000593134 LRRC7Q96NW7 1537 aa12.39□□□□□ -0.43
RDH13-222ENST00000593134 TMC1Q8TDI8 760 aa12.39□□□□□ -0.43
RDH13-222ENST00000593134 C19orf44Q9H6X5 657 aa12.39□□□□□ -0.43
RDH13-222ENST00000593134 PANK3Q9H999 370 aa12.39□□□□□ -0.43
RDH13-222ENST00000593134 CABP1Q9NZU7 370 aa12.39□□□□□ -0.43
RDH13-222ENST00000593134 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
RDH13-222ENST00000593134 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
RDH13-222ENST00000593134 CARD14Q9BXL6 1004 aa12.38□□□□□ -0.43
RDH13-222ENST00000593134 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
RDH13-222ENST00000593134 CCDC61Q9Y6R9 512 aa12.37□□□□□ -0.43
RDH13-222ENST00000593134 PER1O15534 1290 aaPredicted RBP12.36□□□□□ -0.43
RDH13-222ENST00000593134 DIEXFQ68CQ4 756 aaKnown RBP12.36□□□□□ -0.43
RDH13-222ENST00000593134 NCOA3Q9Y6Q9 1424 aa12.36□□□□□ -0.43
RDH13-222ENST00000593134 LTBP4Q8N2S1 1624 aa12.35□□□□□ -0.43
RDH13-222ENST00000593134 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
RDH13-222ENST00000593134 ATF3P18847 181 aa12.34□□□□□ -0.43
RDH13-222ENST00000593134 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
RDH13-222ENST00000593134 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
RDH13-222ENST00000593134 ATAD2Q6PL18 1390 aa12.33□□□□□ -0.44
RDH13-222ENST00000593134 ADGRB2O60241 1585 aa12.33□□□□□ -0.44
RDH13-222ENST00000593134 ATP7BP35670 1465 aa12.32□□□□□ -0.44
RDH13-222ENST00000593134 PPIP5K1Q6PFW1 1433 aa12.31□□□□□ -0.44
RDH13-222ENST00000593134 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
RDH13-222ENST00000593134 CADPS2Q86UW7 1296 aa12.31□□□□□ -0.44
RDH13-222ENST00000593134 CD163L1Q9NR16 1453 aa12.31□□□□□ -0.44
RDH13-222ENST00000593134 ACEP12821 1306 aa12.31□□□□□ -0.44
RDH13-222ENST00000593134 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
RDH13-222ENST00000593134 MSH6P52701 1360 aa12.3□□□□□ -0.44
RDH13-222ENST00000593134 CNGB1Q14028 1251 aaPredicted RBP12.3□□□□□ -0.44
RDH13-222ENST00000593134 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
RDH13-222ENST00000593134 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
RDH13-222ENST00000593134 MST1RQ04912 1400 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 ANKARQ7Z5J8 1434 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 C1orf167Q5SNV9 1468 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 TERF2IPQ9NYB0 399 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 CDC42BPGQ6DT37 1551 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 USP32Q8NFA0 1604 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 A0A1W2PP64 1363 aa12.29□□□□□ -0.44
RDH13-222ENST00000593134 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
RDH13-222ENST00000593134 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
RDH13-222ENST00000593134 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
RDH13-222ENST00000593134 MIER1Q8N108 512 aa12.28□□□□□ -0.44
RDH13-222ENST00000593134 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
RDH13-222ENST00000593134 DDX17Q92841 729 aaKnown RBP12.28□□□□□ -0.44
RDH13-222ENST00000593134 ANKRD36BQ8N2N9 1353 aa12.28□□□□□ -0.44
RDH13-222ENST00000593134 NINLQ9Y2I6 1382 aa12.28□□□□□ -0.44
RDH13-222ENST00000593134 FOXO3O43524 673 aa12.27□□□□□ -0.45
RDH13-222ENST00000593134 KNSTRNQ9Y448 316 aa12.27□□□□□ -0.45
RDH13-222ENST00000593134 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
RDH13-222ENST00000593134 DCCP43146 1447 aa12.27□□□□□ -0.45
RDH13-222ENST00000593134 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
RDH13-222ENST00000593134 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
RDH13-222ENST00000593134 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
RDH13-222ENST00000593134 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
RDH13-222ENST00000593134 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
RDH13-222ENST00000593134 ZNF692Q9BU19 519 aaPredicted RBP12.26□□□□□ -0.45
RDH13-222ENST00000593134 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
RDH13-222ENST00000593134 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
RDH13-222ENST00000593134 MYOM1P52179 1685 aa12.26□□□□□ -0.45
RDH13-222ENST00000593134 FYB1O15117 783 aa12.25□□□□□ -0.45
RDH13-222ENST00000593134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.25□□□□□ -0.45
RDH13-222ENST00000593134 KTN1Q86UP2 1357 aaKnown RBP12.25□□□□□ -0.45
RDH13-222ENST00000593134 NSD3Q9BZ95 1437 aa12.25□□□□□ -0.45
RDH13-222ENST00000593134 PSME1Q06323 249 aa12.24□□□□□ -0.45
RDH13-222ENST00000593134 KRT28Q7Z3Y7 464 aa12.24□□□□□ -0.45
RDH13-222ENST00000593134 TTC21BQ7Z4L5 1316 aa12.24□□□□□ -0.45
RDH13-222ENST00000593134 NME9Q86XW9 330 aa12.24□□□□□ -0.45
RDH13-222ENST00000593134 SSH2Q76I76 1423 aa12.23□□□□□ -0.45
RDH13-222ENST00000593134 KCNA4P22459 653 aa12.23□□□□□ -0.45
RDH13-222ENST00000593134 GGNBP2Q9H3C7 697 aa12.23□□□□□ -0.45
RDH13-222ENST00000593134 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
RDH13-222ENST00000593134 USP6P35125 1406 aa12.21□□□□□ -0.45
RDH13-222ENST00000593134 UBAP1LF5GYI3 381 aa12.21□□□□□ -0.45
RDH13-222ENST00000593134 ANP32CO43423 234 aa12.21□□□□□ -0.45
RDH13-222ENST00000593134 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms