RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 USP21Q9UK80 565 aa16.92■□□□□ 0.3
PRKCSH-220ENST00000593104 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
PRKCSH-220ENST00000593104 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
PRKCSH-220ENST00000593104 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
PRKCSH-220ENST00000593104 PLEKHH1Q9ULM0 1364 aa16.9■□□□□ 0.3
PRKCSH-220ENST00000593104 PRAG1Q86YV5 1406 aa16.89■□□□□ 0.29
PRKCSH-220ENST00000593104 TMEM132EQ6IEE7 984 aa16.89■□□□□ 0.29
PRKCSH-220ENST00000593104 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
PRKCSH-220ENST00000593104 FOXO3O43524 673 aa16.88■□□□□ 0.29
PRKCSH-220ENST00000593104 CDC42BPGQ6DT37 1551 aa16.88■□□□□ 0.29
PRKCSH-220ENST00000593104 COL22A1Q8NFW1 1626 aaPredicted RBP16.88■□□□□ 0.29
PRKCSH-220ENST00000593104 PXDNQ92626 1479 aa16.87■□□□□ 0.29
PRKCSH-220ENST00000593104 MYOM2P54296 1465 aa16.86■□□□□ 0.29
PRKCSH-220ENST00000593104 ATRNO75882 1429 aa16.86■□□□□ 0.29
PRKCSH-220ENST00000593104 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
PRKCSH-220ENST00000593104 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
PRKCSH-220ENST00000593104 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-220ENST00000593104 TRPC5Q9UL62 973 aaPredicted RBP16.85■□□□□ 0.29
PRKCSH-220ENST00000593104 SPATA31E1Q6ZUB1 1445 aa16.84■□□□□ 0.29
PRKCSH-220ENST00000593104 BCL9LQ86UU0 1499 aa16.84■□□□□ 0.29
PRKCSH-220ENST00000593104 MARF1Q9Y4F3 1742 aaKnown RBP16.84■□□□□ 0.29
PRKCSH-220ENST00000593104 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.28
PRKCSH-220ENST00000593104 NPHP3Q7Z494 1330 aa16.83■□□□□ 0.28
PRKCSH-220ENST00000593104 ATAD2Q6PL18 1390 aa16.82■□□□□ 0.28
PRKCSH-220ENST00000593104 RGPD8O14715 1765 aaPredicted RBP16.82■□□□□ 0.28
PRKCSH-220ENST00000593104 LRPPRCP42704 1394 aaKnown RBP16.81■□□□□ 0.28
PRKCSH-220ENST00000593104 MPHOSPH9Q99550 1183 aa16.81■□□□□ 0.28
PRKCSH-220ENST00000593104 FMN2Q9NZ56 1722 aa16.81■□□□□ 0.28
PRKCSH-220ENST00000593104 TECPR2O15040 1411 aa16.8■□□□□ 0.28
PRKCSH-220ENST00000593104 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
PRKCSH-220ENST00000593104 PIK3C2GO75747 1445 aa16.79■□□□□ 0.28
PRKCSH-220ENST00000593104 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
PRKCSH-220ENST00000593104 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
PRKCSH-220ENST00000593104 CABLES1Q8TDN4 633 aa16.77■□□□□ 0.28
PRKCSH-220ENST00000593104 GLI3P10071 1580 aa16.77■□□□□ 0.27
PRKCSH-220ENST00000593104 ABCC11Q96J66 1382 aa16.77■□□□□ 0.27
PRKCSH-220ENST00000593104 GJD4Q96KN9 370 aaPredicted RBP16.76■□□□□ 0.27
PRKCSH-220ENST00000593104 ANKRD30BQ9BXX2 1392 aa16.76■□□□□ 0.27
PRKCSH-220ENST00000593104 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
PRKCSH-220ENST00000593104 CFAP70Q5T0N1 1121 aa16.75■□□□□ 0.27
PRKCSH-220ENST00000593104 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
PRKCSH-220ENST00000593104 BRWD3Q6RI45 1802 aa16.75■□□□□ 0.27
PRKCSH-220ENST00000593104 RALGAPBQ86X10 1494 aa16.74■□□□□ 0.27
PRKCSH-220ENST00000593104 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
PRKCSH-220ENST00000593104 KIF1AQ12756 1690 aa16.73■□□□□ 0.27
PRKCSH-220ENST00000593104 SLIT2O94813 1529 aa16.73■□□□□ 0.27
PRKCSH-220ENST00000593104 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.73■□□□□ 0.27
PRKCSH-220ENST00000593104 UNC5CLQ8IV45 518 aa16.71■□□□□ 0.27
PRKCSH-220ENST00000593104 C14orf93Q9H972 538 aaKnown RBP16.71■□□□□ 0.27
PRKCSH-220ENST00000593104 PLCH1Q4KWH8 1693 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 LMOD2Q6P5Q4 547 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 DEFB132Q7Z7B7 95 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 PRAM1Q96QH2 718 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 ABCA3Q99758 1704 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
PRKCSH-220ENST00000593104 HAP1P54257 671 aaPredicted RBP16.69■□□□□ 0.26
PRKCSH-220ENST00000593104 NRXN1Q9ULB1 1477 aa16.68■□□□□ 0.26
PRKCSH-220ENST00000593104 ZRANB1Q9UGI0 708 aa16.68■□□□□ 0.26
PRKCSH-220ENST00000593104 EP400Q96L91 3159 aa16.68■□□□□ 0.26
PRKCSH-220ENST00000593104 HIRIP3Q9BW71 556 aaPredicted RBP16.67■□□□□ 0.26
PRKCSH-220ENST00000593104 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
PRKCSH-220ENST00000593104 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
PRKCSH-220ENST00000593104 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
PRKCSH-220ENST00000593104 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
PRKCSH-220ENST00000593104 PSME1Q06323 249 aa16.63■□□□□ 0.25
PRKCSH-220ENST00000593104 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
PRKCSH-220ENST00000593104 POGKQ9P215 609 aa16.63■□□□□ 0.25
PRKCSH-220ENST00000593104 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
PRKCSH-220ENST00000593104 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
PRKCSH-220ENST00000593104 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 TRPM3Q9HCF6 1732 aaPredicted RBP16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 VPS72Q15906 364 aa16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 ADGRB1O14514 1584 aa16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 PRR36Q9H6K5 1346 aa16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 NWD2Q9ULI1 1742 aa16.62■□□□□ 0.25
PRKCSH-220ENST00000593104 CCDC125Q86Z20 511 aa16.61■□□□□ 0.25
PRKCSH-220ENST00000593104 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
PRKCSH-220ENST00000593104 RAB3GAP2Q9H2M9 1393 aa16.61■□□□□ 0.25
PRKCSH-220ENST00000593104 A0A0G2JS52 829 aa16.6■□□□□ 0.25
PRKCSH-220ENST00000593104 MYT1Q01538 1121 aa16.6■□□□□ 0.25
PRKCSH-220ENST00000593104 FAM182BQ5T319 152 aa16.6■□□□□ 0.25
PRKCSH-220ENST00000593104 DLC1Q96QB1 1528 aa16.6■□□□□ 0.25
PRKCSH-220ENST00000593104 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
PRKCSH-220ENST00000593104 ADGRB2O60241 1585 aa16.59■□□□□ 0.25
PRKCSH-220ENST00000593104 FAM98CQ17RN3 349 aaKnown RBP16.58■□□□□ 0.24
PRKCSH-220ENST00000593104 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
PRKCSH-220ENST00000593104 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
PRKCSH-220ENST00000593104 ALS2Q96Q42 1657 aa16.58■□□□□ 0.24
PRKCSH-220ENST00000593104 BTG4Q9NY30 223 aa16.57■□□□□ 0.24
PRKCSH-220ENST00000593104 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
PRKCSH-220ENST00000593104 PSDA5PKW4 1024 aaPredicted RBP16.56■□□□□ 0.24
PRKCSH-220ENST00000593104 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-220ENST00000593104 ONECUT3O60422 494 aaPredicted RBP16.55■□□□□ 0.24
PRKCSH-220ENST00000593104 SF3B2Q13435 895 aaKnown RBP16.55■□□□□ 0.24
PRKCSH-220ENST00000593104 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
PRKCSH-220ENST00000593104 CRYBG1Q9Y4K1 1723 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms