RNA–Protein interactions for RNA: ENST00000592991.1

LDLRAD4-218, Transcript of low density lipoprotein receptor class A domain containing 4, human

TSL 1 (best) BASIC

Gene LDLRAD4, Length 1,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDLRAD4-218	ENST00000592991	MYOM1	P52179	1685 aa		35.43	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	SLC24A1	O60721	1099 aa		35.41	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	KCNA6	P17658	529 aa		35.41	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	CDCA8	Q53HL2	280 aa		35.41	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	SIRT1	Q96EB6	747 aa		35.41	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	PTCH1	Q13635	1447 aa		35.4	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	EVC2	Q86UK5	1308 aa		35.39	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	35.39	■■■■□ 3.26
LDLRAD4-218	ENST00000592991	MIER1	Q8N108	512 aa		35.36	■■■■□ 3.25
LDLRAD4-218	ENST00000592991	CABP2	Q9NPB3	220 aa		35.36	■■■■□ 3.25
LDLRAD4-218	ENST00000592991	SRPK2	P78362	688 aa	Known RBP	35.31	■■■■□ 3.24
LDLRAD4-218	ENST00000592991	NWD1	Q149M9	1564 aa		35.3	■■■■□ 3.24
LDLRAD4-218	ENST00000592991	CDK19	Q9BWU1	502 aa		35.3	■■■■□ 3.24
LDLRAD4-218	ENST00000592991	PANK3	Q9H999	370 aa		35.27	■■■■□ 3.24
LDLRAD4-218	ENST00000592991	ADGRB2	O60241	1585 aa		35.26	■■■■□ 3.24
LDLRAD4-218	ENST00000592991	RBM33	Q96EV2	1170 aa	Known RBP	35.26	■■■■□ 3.24
LDLRAD4-218	ENST00000592991	STRCP1	A6NGW2	1772 aa		35.25	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	TMC1	Q8TDI8	760 aa		35.24	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	WASL	O00401	505 aa	Predicted RBP	35.24	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	CNGB1	Q14028	1251 aa	Predicted RBP	35.21	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	SLC12A5	Q9H2X9	1139 aa		35.21	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	PUS7	Q96PZ0	661 aa	Known RBP	35.21	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	NALCN	Q8IZF0	1738 aa		35.2	■■■■□ 3.23
LDLRAD4-218	ENST00000592991	ANP32C	O43423	234 aa		35.18	■■■■□ 3.22
LDLRAD4-218	ENST00000592991	ATAD2	Q6PL18	1390 aa		35.18	■■■■□ 3.22
LDLRAD4-218	ENST00000592991	PER1	O15534	1290 aa	Predicted RBP	35.14	■■■■□ 3.22
LDLRAD4-218	ENST00000592991	NKTR	P30414	1462 aa	Known RBP	35.13	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	NUTM2F	A1L443	756 aa		35.13	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	PRR36	Q9H6K5	1346 aa		35.12	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	ATP7B	P35670	1465 aa		35.11	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	PROSER2	Q86WR7	435 aa	Predicted RBP	35.1	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	NUDT16	Q96DE0	195 aa	Known RBP	35.1	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	CARD14	Q9BXL6	1004 aa		35.09	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	USP32	Q8NFA0	1604 aa		35.08	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	CABP1	Q9NZU7	370 aa		35.08	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	ADGRL3	Q9HAR2	1447 aa		35.07	■■■■□ 3.21
LDLRAD4-218	ENST00000592991	FMN2	Q9NZ56	1722 aa		35.06	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	35.06	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	NINL	Q9Y2I6	1382 aa		35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	TOPAZ1	Q8N9V7	1692 aa		35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	PPIP5K1	Q6PFW1	1433 aa		35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	CD163L1	Q9NR16	1453 aa		35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	PRKRIP1	Q9H875	184 aa	Predicted RBP	35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	CDC42BPG	Q6DT37	1551 aa		35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	ANKRD36B	Q8N2N9	1353 aa		35.05	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	RGPD8	O14715	1765 aa	Predicted RBP	35.04	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	C14orf37	Q86TY3	774 aa		35.04	■■■■□ 3.2
LDLRAD4-218	ENST00000592991		A0A1W2PP64	1363 aa		35.04	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	KNSTRN	Q9Y448	316 aa		35.03	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	NSD3	Q9BZ95	1437 aa		35.03	■■■■□ 3.2
LDLRAD4-218	ENST00000592991	CC2D1B	Q5T0F9	858 aa	Known RBP	35.01	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	TMEM94	Q12767	1356 aa		35	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	CCDC61	Q9Y6R9	512 aa		35	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	AMER1	Q5JTC6	1135 aa	Predicted RBP	34.97	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	DMRT2	Q9Y5R5	561 aa		34.96	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	XIRP1	Q702N8	1843 aa	Known RBP	34.96	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	ITSN1	Q15811	1721 aa		34.95	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	KTN1	Q86UP2	1357 aa	Known RBP	34.95	■■■■□ 3.19
LDLRAD4-218	ENST00000592991	TERF2IP	Q9NYB0	399 aa		34.95	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	34.92	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	ANKAR	Q7Z5J8	1434 aa		34.92	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	AKAP12	Q02952	1782 aa		34.91	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	LRRC7	Q96NW7	1537 aa		34.91	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	PARD3	Q8TEW0	1356 aa		34.89	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	CPSF1	Q10570	1443 aa	Known RBP	34.89	■■■■□ 3.18
LDLRAD4-218	ENST00000592991	PMFBP1	Q8TBY8	1022 aa		34.88	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	MON2	Q7Z3U7	1717 aa		34.87	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	AEBP2	Q6ZN18	517 aa	Predicted RBP	34.87	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	C19orf44	Q9H6X5	657 aa		34.85	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	PLEKHG3	A1L390	1219 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	ACE	P12821	1306 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	NPC1L1	Q9UHC9	1359 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	NCOA3	Q9Y6Q9	1424 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	CCER2	I3L3R5	266 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	RALBP1	Q15311	655 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	CCDC184	Q52MB2	194 aa		34.84	■■■■□ 3.17
LDLRAD4-218	ENST00000592991	CGNL1	Q0VF96	1302 aa		34.82	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	KIF20B	Q96Q89	1820 aa		34.8	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	34.79	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	MSH6	P52701	1360 aa		34.78	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	MYBBP1A	Q9BQG0	1328 aa	Known RBP	34.78	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	EDC4	Q6P2E9	1401 aa	Known RBP	34.77	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	NRK	Q7Z2Y5	1582 aa		34.77	■■■■□ 3.16
LDLRAD4-218	ENST00000592991	ATF3	P18847	181 aa		34.76	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	NGDN	Q8NEJ9	315 aa	Known RBP	34.76	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	DCC	P43146	1447 aa		34.76	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	POLR3A	O14802	1390 aa	Predicted RBP	34.76	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	ESCO1	Q5FWF5	840 aa		34.75	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	USP6	P35125	1406 aa		34.74	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	MST1R	Q04912	1400 aa		34.74	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	GGNBP2	Q9H3C7	697 aa		34.74	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	PHF8	Q9UPP1	1060 aa		34.74	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	C1orf167	Q5SNV9	1468 aa		34.74	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	ORAI2	Q96SN7	254 aa		34.73	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	ZNF692	Q9BU19	519 aa	Predicted RBP	34.73	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	ANKRD26	Q9UPS8	1709 aa		34.72	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	FYB1	O15117	783 aa		34.72	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	NSD2	O96028	1365 aa		34.7	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	MRS2	Q9HD23	443 aa		34.7	■■■■□ 3.15
LDLRAD4-218	ENST00000592991	LTBP4	Q8N2S1	1624 aa		34.7	■■■■□ 3.14

Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms