RNA–Protein interactions for RNA: ENST00000592597.1

POLR2E-210, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-210ENST00000592597 PSDA5PKW4 1024 aaPredicted RBP23.56■■□□□ 1.36
POLR2E-210ENST00000592597 LRP5O75197 1615 aa23.55■■□□□ 1.36
POLR2E-210ENST00000592597 GLI3P10071 1580 aa23.55■■□□□ 1.36
POLR2E-210ENST00000592597 SPHKAPQ2M3C7 1700 aa23.55■■□□□ 1.36
POLR2E-210ENST00000592597 ROBO2Q9HCK4 1378 aa23.54■■□□□ 1.36
POLR2E-210ENST00000592597 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.36
POLR2E-210ENST00000592597 ESCO1Q5FWF5 840 aa23.52■■□□□ 1.36
POLR2E-210ENST00000592597 NEXMIFQ5QGS0 1516 aa23.51■■□□□ 1.35
POLR2E-210ENST00000592597 SF3B2Q13435 895 aaKnown RBP23.51■■□□□ 1.35
POLR2E-210ENST00000592597 FOXO3O43524 673 aa23.5■■□□□ 1.35
POLR2E-210ENST00000592597 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.5■■□□□ 1.35
POLR2E-210ENST00000592597 UNC5CLQ8IV45 518 aa23.49■■□□□ 1.35
POLR2E-210ENST00000592597 PXDNQ92626 1479 aa23.48■■□□□ 1.35
POLR2E-210ENST00000592597 SEPT12Q8IYM1 358 aa23.47■■□□□ 1.35
POLR2E-210ENST00000592597 NPHP3Q7Z494 1330 aa23.47■■□□□ 1.35
POLR2E-210ENST00000592597 NUTM2FA1L443 756 aa23.46■■□□□ 1.35
POLR2E-210ENST00000592597 CLTCL1P53675 1640 aa23.45■■□□□ 1.34
POLR2E-210ENST00000592597 HRCP23327 699 aa23.45■■□□□ 1.34
POLR2E-210ENST00000592597 PLEKHG5O94827 1062 aa23.44■■□□□ 1.34
POLR2E-210ENST00000592597 SLIT2O94813 1529 aa23.43■■□□□ 1.34
POLR2E-210ENST00000592597 KIF1BO60333 1816 aa23.43■■□□□ 1.34
POLR2E-210ENST00000592597 ITGAEP38570 1179 aa23.43■■□□□ 1.34
POLR2E-210ENST00000592597 CCDC9Q9Y3X0 531 aaKnown RBP23.39■■□□□ 1.33
POLR2E-210ENST00000592597 ROCK1Q13464 1354 aa23.39■■□□□ 1.33
POLR2E-210ENST00000592597 KRT27Q7Z3Y8 459 aa23.38■■□□□ 1.33
POLR2E-210ENST00000592597 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
POLR2E-210ENST00000592597 USP32Q8NFA0 1604 aa23.35■■□□□ 1.33
POLR2E-210ENST00000592597 CABLES1Q8TDN4 633 aa23.35■■□□□ 1.33
POLR2E-210ENST00000592597 A0A0G2JS52 829 aa23.34■■□□□ 1.33
POLR2E-210ENST00000592597 BAG6P46379 1132 aa23.34■■□□□ 1.33
POLR2E-210ENST00000592597 MYT1Q01538 1121 aa23.34■■□□□ 1.33
POLR2E-210ENST00000592597 EN1Q05925 392 aaPredicted RBP23.34■■□□□ 1.33
POLR2E-210ENST00000592597 R3HDM1Q15032 1099 aaKnown RBP23.34■■□□□ 1.33
POLR2E-210ENST00000592597 CDC42BPGQ6DT37 1551 aa23.34■■□□□ 1.33
POLR2E-210ENST00000592597 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.33
POLR2E-210ENST00000592597 PLCH1Q4KWH8 1693 aa23.33■■□□□ 1.33
POLR2E-210ENST00000592597 VGFO15240 615 aaPredicted RBP23.33■■□□□ 1.33
POLR2E-210ENST00000592597 VPS72Q15906 364 aa23.33■■□□□ 1.33
POLR2E-210ENST00000592597 HAP1P54257 671 aaPredicted RBP23.32■■□□□ 1.32
POLR2E-210ENST00000592597 WAPLQ7Z5K2 1190 aa23.32■■□□□ 1.32
POLR2E-210ENST00000592597 LRPPRCP42704 1394 aaKnown RBP23.31■■□□□ 1.32
POLR2E-210ENST00000592597 ONECUT3O60422 494 aaPredicted RBP23.31■■□□□ 1.32
POLR2E-210ENST00000592597 NAIPQ13075 1403 aa23.31■■□□□ 1.32
POLR2E-210ENST00000592597 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
POLR2E-210ENST00000592597 STK26Q9P289 416 aa23.3■■□□□ 1.32
POLR2E-210ENST00000592597 KRT28Q7Z3Y7 464 aa23.29■■□□□ 1.32
POLR2E-210ENST00000592597 PRAG1Q86YV5 1406 aa23.29■■□□□ 1.32
POLR2E-210ENST00000592597 RGPD8O14715 1765 aaPredicted RBP23.28■■□□□ 1.32
POLR2E-210ENST00000592597 NWD2Q9ULI1 1742 aa23.26■■□□□ 1.31
POLR2E-210ENST00000592597 FAM98CQ17RN3 349 aaKnown RBP23.26■■□□□ 1.31
POLR2E-210ENST00000592597 PPLO60437 1756 aa23.26■■□□□ 1.31
POLR2E-210ENST00000592597 YY1P25490 414 aa23.25■■□□□ 1.31
POLR2E-210ENST00000592597 LMOD2Q6P5Q4 547 aa23.24■■□□□ 1.31
POLR2E-210ENST00000592597 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
POLR2E-210ENST00000592597 RGPD1P0DJD0 1748 aa23.22■■□□□ 1.31
POLR2E-210ENST00000592597 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
POLR2E-210ENST00000592597 FAM83GA6ND36 823 aa23.22■■□□□ 1.31
POLR2E-210ENST00000592597 ABCA3Q99758 1704 aa23.22■■□□□ 1.31
POLR2E-210ENST00000592597 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
POLR2E-210ENST00000592597 CCDC144AA2RUR9 1427 aa23.2■■□□□ 1.3
POLR2E-210ENST00000592597 EZH2Q15910 746 aaKnown RBP23.2■■□□□ 1.3
POLR2E-210ENST00000592597 TNS3Q68CZ2 1445 aa23.18■■□□□ 1.3
POLR2E-210ENST00000592597 RPGRIP1LQ68CZ1 1315 aa23.18■■□□□ 1.3
POLR2E-210ENST00000592597 TMEM132EQ6IEE7 984 aa23.18■■□□□ 1.3
POLR2E-210ENST00000592597 NRAPQ86VF7 1730 aa23.16■■□□□ 1.3
POLR2E-210ENST00000592597 TNS1Q9HBL0 1735 aaKnown RBP23.16■■□□□ 1.3
POLR2E-210ENST00000592597 ADGRF5Q8IZF2 1346 aa23.16■■□□□ 1.3
POLR2E-210ENST00000592597 BTG4Q9NY30 223 aa23.15■■□□□ 1.3
POLR2E-210ENST00000592597 PHF8Q9UPP1 1060 aa23.15■■□□□ 1.3
POLR2E-210ENST00000592597 PSME1Q06323 249 aa23.14■■□□□ 1.29
POLR2E-210ENST00000592597 IFT172Q9UG01 1749 aa23.13■■□□□ 1.29
POLR2E-210ENST00000592597 PPARGC1BQ86YN6 1023 aaKnown RBP23.12■■□□□ 1.29
POLR2E-210ENST00000592597 TECPR2O15040 1411 aa23.1■■□□□ 1.29
POLR2E-210ENST00000592597 TRIM37O94972 964 aa23.1■■□□□ 1.29
POLR2E-210ENST00000592597 CAMKK2Q96RR4 588 aa23.09■■□□□ 1.29
POLR2E-210ENST00000592597 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.29
POLR2E-210ENST00000592597 RGL3Q3MIN7 710 aa23.08■■□□□ 1.29
POLR2E-210ENST00000592597 PMFBP1Q8TBY8 1022 aa23.08■■□□□ 1.29
POLR2E-210ENST00000592597 DISP2A7MBM2 1401 aa23.08■■□□□ 1.28
POLR2E-210ENST00000592597 ABCC11Q96J66 1382 aa23.07■■□□□ 1.28
POLR2E-210ENST00000592597 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
POLR2E-210ENST00000592597 SPATA31A5Q5VU36 1347 aa23.06■■□□□ 1.28
POLR2E-210ENST00000592597 SPATA31A7Q8IWB4 1347 aa23.06■■□□□ 1.28
POLR2E-210ENST00000592597 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
POLR2E-210ENST00000592597 APBA3O96018 575 aa23.04■■□□□ 1.28
POLR2E-210ENST00000592597 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
POLR2E-210ENST00000592597 RRBP1Q9P2E9 1410 aaKnown RBP23.04■■□□□ 1.28
POLR2E-210ENST00000592597 NRXN1Q9ULB1 1477 aa23.04■■□□□ 1.28
POLR2E-210ENST00000592597 COL14A1Q05707 1796 aaKnown RBP23.04■■□□□ 1.28
POLR2E-210ENST00000592597 THSD7AQ9UPZ6 1657 aa23.03■■□□□ 1.28
POLR2E-210ENST00000592597 YTHDC2Q9H6S0 1430 aaKnown RBP23.01■■□□□ 1.27
POLR2E-210ENST00000592597 SLC4A1APQ9BWU0 796 aaKnown RBP23.01■■□□□ 1.27
POLR2E-210ENST00000592597 PPP1R1BQ9UD71 204 aaPredicted RBP23.01■■□□□ 1.27
POLR2E-210ENST00000592597 CAMTA1Q9Y6Y1 1673 aa23■■□□□ 1.27
POLR2E-210ENST00000592597 NUP188Q5SRE5 1749 aa22.99■■□□□ 1.27
POLR2E-210ENST00000592597 ADGRB2O60241 1585 aa22.99■■□□□ 1.27
POLR2E-210ENST00000592597 TRPM3Q9HCF6 1732 aaPredicted RBP22.99■■□□□ 1.27
POLR2E-210ENST00000592597 RREB1Q92766 1687 aa22.98■■□□□ 1.27
POLR2E-210ENST00000592597 FAM196AQ6ZSG2 479 aa22.97■■□□□ 1.27
POLR2E-210ENST00000592597 UTRNP46939 3433 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms