RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ORAI2Q96SN7 254 aa27.95■■■□□ 2.06
CCDC43-205ENST00000592333 DDX17Q92841 729 aaKnown RBP27.94■■■□□ 2.06
CCDC43-205ENST00000592333 CDK12Q9NYV4 1490 aaPredicted RBP27.94■■■□□ 2.06
CCDC43-205ENST00000592333 RXRBP28702 533 aa27.93■■■□□ 2.06
CCDC43-205ENST00000592333 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
CCDC43-205ENST00000592333 AFF2P51816 1311 aa27.91■■■□□ 2.06
CCDC43-205ENST00000592333 NPHP3Q7Z494 1330 aa27.91■■■□□ 2.06
CCDC43-205ENST00000592333 NRXN1Q9ULB1 1477 aa27.9■■■□□ 2.06
CCDC43-205ENST00000592333 C14orf93Q9H972 538 aaKnown RBP27.9■■■□□ 2.06
CCDC43-205ENST00000592333 MYOM2P54296 1465 aa27.89■■■□□ 2.06
CCDC43-205ENST00000592333 RAB3GAP2Q9H2M9 1393 aa27.88■■■□□ 2.05
CCDC43-205ENST00000592333 YTHDC2Q9H6S0 1430 aaKnown RBP27.88■■■□□ 2.05
CCDC43-205ENST00000592333 HRCP23327 699 aa27.87■■■□□ 2.05
CCDC43-205ENST00000592333 ESCO1Q5FWF5 840 aa27.87■■■□□ 2.05
CCDC43-205ENST00000592333 STK26Q9P289 416 aa27.87■■■□□ 2.05
CCDC43-205ENST00000592333 TMEM132EQ6IEE7 984 aa27.85■■■□□ 2.05
CCDC43-205ENST00000592333 WAPLQ7Z5K2 1190 aa27.85■■■□□ 2.05
CCDC43-205ENST00000592333 C8orf37Q96NL8 207 aa27.85■■■□□ 2.05
CCDC43-205ENST00000592333 COL22A1Q8NFW1 1626 aaPredicted RBP27.85■■■□□ 2.05
CCDC43-205ENST00000592333 DHX57Q6P158 1386 aaKnown RBP27.84■■■□□ 2.05
CCDC43-205ENST00000592333 STAC3Q96MF2 364 aa27.82■■■□□ 2.04
CCDC43-205ENST00000592333 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
CCDC43-205ENST00000592333 NGLY1Q96IV0 654 aa27.81■■■□□ 2.04
CCDC43-205ENST00000592333 PXDNQ92626 1479 aa27.81■■■□□ 2.04
CCDC43-205ENST00000592333 QTRT2Q9H974 415 aaKnown RBP27.8■■■□□ 2.04
CCDC43-205ENST00000592333 PLEKHH1Q9ULM0 1364 aa27.78■■■□□ 2.04
CCDC43-205ENST00000592333 FOXO3O43524 673 aa27.77■■■□□ 2.04
CCDC43-205ENST00000592333 FMN2Q9NZ56 1722 aa27.77■■■□□ 2.04
CCDC43-205ENST00000592333 ADAMTS2O95450 1211 aa27.76■■■□□ 2.03
CCDC43-205ENST00000592333 CFAP70Q5T0N1 1121 aa27.76■■■□□ 2.03
CCDC43-205ENST00000592333 FNBP4Q8N3X1 1017 aaPredicted RBP27.76■■■□□ 2.03
CCDC43-205ENST00000592333 UPF1Q92900 1129 aaKnown RBP eCLIP27.76■■■□□ 2.03
CCDC43-205ENST00000592333 KIF1AQ12756 1690 aa27.75■■■□□ 2.03
CCDC43-205ENST00000592333 DLC1Q96QB1 1528 aa27.74■■■□□ 2.03
CCDC43-205ENST00000592333 USP21Q9UK80 565 aa27.72■■■□□ 2.03
CCDC43-205ENST00000592333 TRPC5Q9UL62 973 aaPredicted RBP27.72■■■□□ 2.03
CCDC43-205ENST00000592333 NUTM2FA1L443 756 aa27.68■■■□□ 2.02
CCDC43-205ENST00000592333 SPATA31A3Q5VYP0 1347 aa27.67■■■□□ 2.02
CCDC43-205ENST00000592333 RGS12O14924 1447 aa27.67■■■□□ 2.02
CCDC43-205ENST00000592333 PRAM1Q96QH2 718 aa27.67■■■□□ 2.02
CCDC43-205ENST00000592333 ADGRB1O14514 1584 aa27.66■■■□□ 2.02
CCDC43-205ENST00000592333 PSME1Q06323 249 aa27.66■■■□□ 2.02
CCDC43-205ENST00000592333 POGKQ9P215 609 aa27.65■■■□□ 2.02
CCDC43-205ENST00000592333 PHF8Q9UPP1 1060 aa27.65■■■□□ 2.02
CCDC43-205ENST00000592333 ANKARQ7Z5J8 1434 aa27.65■■■□□ 2.02
CCDC43-205ENST00000592333 MARF1Q9Y4F3 1742 aaKnown RBP27.64■■■□□ 2.02
CCDC43-205ENST00000592333 XPCQ01831 940 aaPredicted RBP27.64■■■□□ 2.02
CCDC43-205ENST00000592333 KRT28Q7Z3Y7 464 aa27.64■■■□□ 2.02
CCDC43-205ENST00000592333 ATRNO75882 1429 aa27.64■■■□□ 2.02
CCDC43-205ENST00000592333 ADGRB2O60241 1585 aa27.64■■■□□ 2.01
CCDC43-205ENST00000592333 DCAF11Q8TEB1 546 aa27.63■■■□□ 2.01
CCDC43-205ENST00000592333 EIF3AQ14152 1382 aaKnown RBP27.61■■■□□ 2.01
CCDC43-205ENST00000592333 BCL9LQ86UU0 1499 aa27.61■■■□□ 2.01
CCDC43-205ENST00000592333 SBNO1A3KN83 1393 aa27.6■■■□□ 2.01
CCDC43-205ENST00000592333 TNS3Q68CZ2 1445 aa27.58■■■□□ 2.01
CCDC43-205ENST00000592333 RGPD8O14715 1765 aaPredicted RBP27.57■■■□□ 2
CCDC43-205ENST00000592333 SAFB2Q14151 953 aaKnown RBP eCLIP27.56■■■□□ 2
CCDC43-205ENST00000592333 KDM2AQ9Y2K7 1162 aa27.56■■■□□ 2
CCDC43-205ENST00000592333 ARHGEF10O15013 1369 aa27.56■■■□□ 2
CCDC43-205ENST00000592333 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
CCDC43-205ENST00000592333 TRAK1Q9UPV9 953 aa27.55■■■□□ 2
CCDC43-205ENST00000592333 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.55■■■□□ 2
CCDC43-205ENST00000592333 SLIT2O94813 1529 aa27.54■■■□□ 2
CCDC43-205ENST00000592333 UNC5CLQ8IV45 518 aa27.53■■■□□ 2
CCDC43-205ENST00000592333 GJD4Q96KN9 370 aaPredicted RBP27.53■■■□□ 2
CCDC43-205ENST00000592333 USP32Q8NFA0 1604 aa27.52■■■□□ 2
CCDC43-205ENST00000592333 WASLO00401 505 aaPredicted RBP27.49■■□□□ 1.99
CCDC43-205ENST00000592333 TULP4Q9NRJ4 1543 aa27.49■■□□□ 1.99
CCDC43-205ENST00000592333 HAP1P54257 671 aaPredicted RBP27.47■■□□□ 1.99
CCDC43-205ENST00000592333 CCDC125Q86Z20 511 aa27.47■■□□□ 1.99
CCDC43-205ENST00000592333 GPRASP1Q5JY77 1395 aa27.47■■□□□ 1.99
CCDC43-205ENST00000592333 MINK1Q8N4C8 1332 aaPredicted RBP27.45■■□□□ 1.99
CCDC43-205ENST00000592333 PMFBP1Q8TBY8 1022 aa27.45■■□□□ 1.98
CCDC43-205ENST00000592333 HIRIP3Q9BW71 556 aaPredicted RBP27.44■■□□□ 1.98
CCDC43-205ENST00000592333 KIAA1210Q9ULL0 1709 aa27.44■■□□□ 1.98
CCDC43-205ENST00000592333 NWD2Q9ULI1 1742 aa27.42■■□□□ 1.98
CCDC43-205ENST00000592333 PRR36Q9H6K5 1346 aa27.41■■□□□ 1.98
CCDC43-205ENST00000592333 TRPM3Q9HCF6 1732 aaPredicted RBP27.41■■□□□ 1.98
CCDC43-205ENST00000592333 RALGAPBQ86X10 1494 aa27.41■■□□□ 1.98
CCDC43-205ENST00000592333 VPS72Q15906 364 aa27.41■■□□□ 1.98
CCDC43-205ENST00000592333 LMOD2Q6P5Q4 547 aa27.41■■□□□ 1.98
CCDC43-205ENST00000592333 ARHGEF28Q8N1W1 1705 aaKnown RBP27.41■■□□□ 1.98
CCDC43-205ENST00000592333 CABLES1Q8TDN4 633 aa27.4■■□□□ 1.98
CCDC43-205ENST00000592333 ABCA3Q99758 1704 aa27.39■■□□□ 1.98
CCDC43-205ENST00000592333 GLI3P10071 1580 aa27.39■■□□□ 1.97
CCDC43-205ENST00000592333 ALS2Q96Q42 1657 aa27.37■■□□□ 1.97
CCDC43-205ENST00000592333 ONECUT3O60422 494 aaPredicted RBP27.37■■□□□ 1.97
CCDC43-205ENST00000592333 NGDNQ8NEJ9 315 aaKnown RBP27.37■■□□□ 1.97
CCDC43-205ENST00000592333 ITSN1Q15811 1721 aa27.36■■□□□ 1.97
CCDC43-205ENST00000592333 PLCH1Q4KWH8 1693 aa27.34■■□□□ 1.97
CCDC43-205ENST00000592333 ATP7BP35670 1465 aa27.34■■□□□ 1.97
CCDC43-205ENST00000592333 FAM83GA6ND36 823 aa27.34■■□□□ 1.97
CCDC43-205ENST00000592333 NUDT16Q96DE0 195 aaKnown RBP27.34■■□□□ 1.97
CCDC43-205ENST00000592333 EP400Q96L91 3159 aa27.32■■□□□ 1.96
CCDC43-205ENST00000592333 CDK19Q9BWU1 502 aa27.3■■□□□ 1.96
CCDC43-205ENST00000592333 CCDC61Q9Y6R9 512 aa27.3■■□□□ 1.96
CCDC43-205ENST00000592333 POLR3AO14802 1390 aaPredicted RBP27.29■■□□□ 1.96
CCDC43-205ENST00000592333 COL14A1Q05707 1796 aaKnown RBP27.29■■□□□ 1.96
CCDC43-205ENST00000592333 SEPT12Q8IYM1 358 aa27.28■■□□□ 1.96
CCDC43-205ENST00000592333 PLEKHG3A1L390 1219 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms