RNA–Protein interactions for RNA: ENST00000592176.1

APOC1-207, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-207ENST00000592176 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
APOC1-207ENST00000592176 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
APOC1-207ENST00000592176 GJD4Q96KN9 370 aaPredicted RBP13.79□□□□□ -0.2
APOC1-207ENST00000592176 STK26Q9P289 416 aa13.79□□□□□ -0.2
APOC1-207ENST00000592176 NAIPQ13075 1403 aa13.79□□□□□ -0.2
APOC1-207ENST00000592176 NALCNQ8IZF0 1738 aa13.78□□□□□ -0.2
APOC1-207ENST00000592176 WAPLQ7Z5K2 1190 aa13.78□□□□□ -0.2
APOC1-207ENST00000592176 ATRNO75882 1429 aa13.78□□□□□ -0.2
APOC1-207ENST00000592176 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
APOC1-207ENST00000592176 RGL3Q3MIN7 710 aa13.77□□□□□ -0.21
APOC1-207ENST00000592176 LAMC1P11047 1609 aa13.75□□□□□ -0.21
APOC1-207ENST00000592176 BCL9LQ86UU0 1499 aa13.75□□□□□ -0.21
APOC1-207ENST00000592176 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
APOC1-207ENST00000592176 ADGRF5Q8IZF2 1346 aa13.75□□□□□ -0.21
APOC1-207ENST00000592176 KIF1BO60333 1816 aa13.74□□□□□ -0.21
APOC1-207ENST00000592176 TMEM132EQ6IEE7 984 aa13.74□□□□□ -0.21
APOC1-207ENST00000592176 UNC5CLQ8IV45 518 aa13.74□□□□□ -0.21
APOC1-207ENST00000592176 MYOM2P54296 1465 aa13.74□□□□□ -0.21
APOC1-207ENST00000592176 KRT28Q7Z3Y7 464 aa13.73□□□□□ -0.21
APOC1-207ENST00000592176 RRBP1Q9P2E9 1410 aaKnown RBP13.73□□□□□ -0.21
APOC1-207ENST00000592176 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
APOC1-207ENST00000592176 SPATA31A3Q5VYP0 1347 aa13.71□□□□□ -0.21
APOC1-207ENST00000592176 HAP1P54257 671 aaPredicted RBP13.71□□□□□ -0.21
APOC1-207ENST00000592176 PXDNQ92626 1479 aa13.7□□□□□ -0.22
APOC1-207ENST00000592176 PSME1Q06323 249 aa13.7□□□□□ -0.22
APOC1-207ENST00000592176 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
APOC1-207ENST00000592176 COL22A1Q8NFW1 1626 aaPredicted RBP13.69□□□□□ -0.22
APOC1-207ENST00000592176 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
APOC1-207ENST00000592176 ANKRD30BQ9BXX2 1392 aa13.69□□□□□ -0.22
APOC1-207ENST00000592176 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
APOC1-207ENST00000592176 SEPT12Q8IYM1 358 aa13.68□□□□□ -0.22
APOC1-207ENST00000592176 MPHOSPH9Q99550 1183 aa13.68□□□□□ -0.22
APOC1-207ENST00000592176 PHF8Q9UPP1 1060 aa13.68□□□□□ -0.22
APOC1-207ENST00000592176 CCDC9Q9Y3X0 531 aaKnown RBP13.68□□□□□ -0.22
APOC1-207ENST00000592176 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
APOC1-207ENST00000592176 CCDC144AA2RUR9 1427 aa13.67□□□□□ -0.22
APOC1-207ENST00000592176 VPS72Q15906 364 aa13.67□□□□□ -0.22
APOC1-207ENST00000592176 LMOD2Q6P5Q4 547 aa13.67□□□□□ -0.22
APOC1-207ENST00000592176 CABLES1Q8TDN4 633 aa13.67□□□□□ -0.22
APOC1-207ENST00000592176 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
APOC1-207ENST00000592176 TECPR2O15040 1411 aa13.66□□□□□ -0.22
APOC1-207ENST00000592176 DEFB132Q7Z7B7 95 aa13.66□□□□□ -0.22
APOC1-207ENST00000592176 RALGAPBQ86X10 1494 aa13.66□□□□□ -0.22
APOC1-207ENST00000592176 BLMP54132 1417 aaPredicted RBP13.65□□□□□ -0.22
APOC1-207ENST00000592176 SLIT2O94813 1529 aa13.65□□□□□ -0.22
APOC1-207ENST00000592176 SRCAPQ6ZRS2 3230 aa13.65□□□□□ -0.22
APOC1-207ENST00000592176 ONECUT3O60422 494 aaPredicted RBP13.65□□□□□ -0.22
APOC1-207ENST00000592176 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
APOC1-207ENST00000592176 PPLO60437 1756 aa13.64□□□□□ -0.23
APOC1-207ENST00000592176 KRT27Q7Z3Y8 459 aa13.64□□□□□ -0.23
APOC1-207ENST00000592176 SPATA31E1Q6ZUB1 1445 aa13.64□□□□□ -0.23
APOC1-207ENST00000592176 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
APOC1-207ENST00000592176 DHX57Q6P158 1386 aaKnown RBP13.63□□□□□ -0.23
APOC1-207ENST00000592176 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
APOC1-207ENST00000592176 SAFB2Q14151 953 aaKnown RBP eCLIP13.63□□□□□ -0.23
APOC1-207ENST00000592176 CFAP70Q5T0N1 1121 aa13.63□□□□□ -0.23
APOC1-207ENST00000592176 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
APOC1-207ENST00000592176 PRAM1Q96QH2 718 aa13.61□□□□□ -0.23
APOC1-207ENST00000592176 POGKQ9P215 609 aa13.61□□□□□ -0.23
APOC1-207ENST00000592176 SBNO1A3KN83 1393 aa13.6□□□□□ -0.23
APOC1-207ENST00000592176 A0A0G2JS52 829 aa13.6□□□□□ -0.23
APOC1-207ENST00000592176 PIK3C2GO75747 1445 aa13.6□□□□□ -0.23
APOC1-207ENST00000592176 GLI3P10071 1580 aa13.6□□□□□ -0.23
APOC1-207ENST00000592176 MYT1Q01538 1121 aa13.6□□□□□ -0.23
APOC1-207ENST00000592176 TNS3Q68CZ2 1445 aa13.59□□□□□ -0.23
APOC1-207ENST00000592176 MARF1Q9Y4F3 1742 aaKnown RBP13.59□□□□□ -0.23
APOC1-207ENST00000592176 ARHGEF10O15013 1369 aa13.58□□□□□ -0.23
APOC1-207ENST00000592176 BAG6P46379 1132 aa13.58□□□□□ -0.24
APOC1-207ENST00000592176 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
APOC1-207ENST00000592176 EP400Q96L91 3159 aa13.58□□□□□ -0.24
APOC1-207ENST00000592176 BTG4Q9NY30 223 aa13.57□□□□□ -0.24
APOC1-207ENST00000592176 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
APOC1-207ENST00000592176 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
APOC1-207ENST00000592176 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
APOC1-207ENST00000592176 USP32Q8NFA0 1604 aa13.55□□□□□ -0.24
APOC1-207ENST00000592176 PSDA5PKW4 1024 aaPredicted RBP13.55□□□□□ -0.24
APOC1-207ENST00000592176 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
APOC1-207ENST00000592176 KIF1AQ12756 1690 aa13.55□□□□□ -0.24
APOC1-207ENST00000592176 GPRASP1Q5JY77 1395 aa13.55□□□□□ -0.24
APOC1-207ENST00000592176 NRXN1Q9ULB1 1477 aa13.55□□□□□ -0.24
APOC1-207ENST00000592176 HIRIP3Q9BW71 556 aaPredicted RBP13.54□□□□□ -0.24
APOC1-207ENST00000592176 HRCP23327 699 aa13.53□□□□□ -0.24
APOC1-207ENST00000592176 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
APOC1-207ENST00000592176 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
APOC1-207ENST00000592176 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
APOC1-207ENST00000592176 NGDNQ8NEJ9 315 aaKnown RBP13.52□□□□□ -0.25
APOC1-207ENST00000592176 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
APOC1-207ENST00000592176 ANKARQ7Z5J8 1434 aa13.52□□□□□ -0.25
APOC1-207ENST00000592176 KNDC1Q76NI1 1749 aa13.52□□□□□ -0.25
APOC1-207ENST00000592176 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
APOC1-207ENST00000592176 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
APOC1-207ENST00000592176 SPATA31A5Q5VU36 1347 aa13.5□□□□□ -0.25
APOC1-207ENST00000592176 SPATA31A7Q8IWB4 1347 aa13.5□□□□□ -0.25
APOC1-207ENST00000592176 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
APOC1-207ENST00000592176 PRR36Q9H6K5 1346 aa13.49□□□□□ -0.25
APOC1-207ENST00000592176 R3HDM1Q15032 1099 aaKnown RBP13.49□□□□□ -0.25
APOC1-207ENST00000592176 PRDM11Q9NQV5 511 aa13.49□□□□□ -0.25
APOC1-207ENST00000592176 IFT172Q9UG01 1749 aa13.49□□□□□ -0.25
APOC1-207ENST00000592176 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
APOC1-207ENST00000592176 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms