RNA–Protein interactions for RNA: ENST00000592159.1

KDM4B-209, Transcript of lysine demethylase 4B, humanhuman

TSL 3

Gene KDM4B, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-209ENST00000592159 USP21Q9UK80 565 aa13.88□□□□□ -0.19
KDM4B-209ENST00000592159 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
KDM4B-209ENST00000592159 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
KDM4B-209ENST00000592159 NHSL1Q5SYE7 1610 aa13.86□□□□□ -0.19
KDM4B-209ENST00000592159 C1orf167Q5SNV9 1468 aa13.86□□□□□ -0.19
KDM4B-209ENST00000592159 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
KDM4B-209ENST00000592159 TRPC5Q9UL62 973 aaPredicted RBP13.85□□□□□ -0.19
KDM4B-209ENST00000592159 CCDC144AA2RUR9 1427 aa13.84□□□□□ -0.19
KDM4B-209ENST00000592159 RPGRIP1LQ68CZ1 1315 aa13.84□□□□□ -0.19
KDM4B-209ENST00000592159 KIF1BO60333 1816 aa13.83□□□□□ -0.2
KDM4B-209ENST00000592159 RGS12O14924 1447 aa13.83□□□□□ -0.2
KDM4B-209ENST00000592159 ESCO1Q5FWF5 840 aa13.83□□□□□ -0.2
KDM4B-209ENST00000592159 SOS2Q07890 1332 aaPredicted RBP13.83□□□□□ -0.2
KDM4B-209ENST00000592159 NEXMIFQ5QGS0 1516 aa13.82□□□□□ -0.2
KDM4B-209ENST00000592159 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
KDM4B-209ENST00000592159 ATAD2Q6PL18 1390 aa13.82□□□□□ -0.2
KDM4B-209ENST00000592159 ROBO2Q9HCK4 1378 aa13.82□□□□□ -0.2
KDM4B-209ENST00000592159 NALCNQ8IZF0 1738 aa13.81□□□□□ -0.2
KDM4B-209ENST00000592159 FNBP4Q8N3X1 1017 aaPredicted RBP13.8□□□□□ -0.2
KDM4B-209ENST00000592159 STK26Q9P289 416 aa13.8□□□□□ -0.2
KDM4B-209ENST00000592159 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
KDM4B-209ENST00000592159 NUTM2FA1L443 756 aa13.79□□□□□ -0.2
KDM4B-209ENST00000592159 FOXO3O43524 673 aa13.79□□□□□ -0.2
KDM4B-209ENST00000592159 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
KDM4B-209ENST00000592159 RGL3Q3MIN7 710 aa13.79□□□□□ -0.2
KDM4B-209ENST00000592159 NPHP3Q7Z494 1330 aa13.79□□□□□ -0.2
KDM4B-209ENST00000592159 ZNF316A6NFI3 1004 aaPredicted RBP13.78□□□□□ -0.2
KDM4B-209ENST00000592159 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
KDM4B-209ENST00000592159 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
KDM4B-209ENST00000592159 WAPLQ7Z5K2 1190 aa13.76□□□□□ -0.21
KDM4B-209ENST00000592159 CCDC125Q86Z20 511 aa13.76□□□□□ -0.21
KDM4B-209ENST00000592159 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
KDM4B-209ENST00000592159 LRPPRCP42704 1394 aaKnown RBP13.75□□□□□ -0.21
KDM4B-209ENST00000592159 GJD4Q96KN9 370 aaPredicted RBP13.75□□□□□ -0.21
KDM4B-209ENST00000592159 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
KDM4B-209ENST00000592159 ATRNO75882 1429 aa13.73□□□□□ -0.21
KDM4B-209ENST00000592159 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
KDM4B-209ENST00000592159 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
KDM4B-209ENST00000592159 LAMC1P11047 1609 aa13.72□□□□□ -0.21
KDM4B-209ENST00000592159 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
KDM4B-209ENST00000592159 PLEKHG5O94827 1062 aa13.72□□□□□ -0.21
KDM4B-209ENST00000592159 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
KDM4B-209ENST00000592159 UNC5CLQ8IV45 518 aa13.71□□□□□ -0.21
KDM4B-209ENST00000592159 BCL9LQ86UU0 1499 aa13.7□□□□□ -0.22
KDM4B-209ENST00000592159 PPLO60437 1756 aa13.69□□□□□ -0.22
KDM4B-209ENST00000592159 ADRA2BP18089 450 aa13.69□□□□□ -0.22
KDM4B-209ENST00000592159 PSME1Q06323 249 aa13.69□□□□□ -0.22
KDM4B-209ENST00000592159 SF3B2Q13435 895 aaKnown RBP13.69□□□□□ -0.22
KDM4B-209ENST00000592159 LMOD2Q6P5Q4 547 aa13.69□□□□□ -0.22
KDM4B-209ENST00000592159 CCDC9Q9Y3X0 531 aaKnown RBP13.69□□□□□ -0.22
KDM4B-209ENST00000592159 SPATA31E1Q6ZUB1 1445 aa13.69□□□□□ -0.22
KDM4B-209ENST00000592159 COL22A1Q8NFW1 1626 aaPredicted RBP13.68□□□□□ -0.22
KDM4B-209ENST00000592159 MYOM2P54296 1465 aa13.68□□□□□ -0.22
KDM4B-209ENST00000592159 PRAG1Q86YV5 1406 aa13.68□□□□□ -0.22
KDM4B-209ENST00000592159 PXDNQ92626 1479 aa13.67□□□□□ -0.22
KDM4B-209ENST00000592159 SPATA31A3Q5VYP0 1347 aa13.67□□□□□ -0.22
KDM4B-209ENST00000592159 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
KDM4B-209ENST00000592159 PHF8Q9UPP1 1060 aa13.66□□□□□ -0.22
KDM4B-209ENST00000592159 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
KDM4B-209ENST00000592159 CDC42BPGQ6DT37 1551 aa13.66□□□□□ -0.22
KDM4B-209ENST00000592159 SEPT12Q8IYM1 358 aa13.65□□□□□ -0.22
KDM4B-209ENST00000592159 CABLES1Q8TDN4 633 aa13.65□□□□□ -0.22
KDM4B-209ENST00000592159 PLEKHH1Q9ULM0 1364 aa13.65□□□□□ -0.22
KDM4B-209ENST00000592159 MARF1Q9Y4F3 1742 aaKnown RBP13.64□□□□□ -0.23
KDM4B-209ENST00000592159 A0A0G2JS52 829 aa13.64□□□□□ -0.23
KDM4B-209ENST00000592159 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
KDM4B-209ENST00000592159 MYT1Q01538 1121 aa13.64□□□□□ -0.23
KDM4B-209ENST00000592159 SAFB2Q14151 953 aaKnown RBP eCLIP13.64□□□□□ -0.231e-6■■□□□ 11.5
KDM4B-209ENST00000592159 HSPA5P11021 654 aaKnown RBP13.63□□□□□ -0.23
KDM4B-209ENST00000592159 DEFB132Q7Z7B7 95 aa13.63□□□□□ -0.23
KDM4B-209ENST00000592159 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
KDM4B-209ENST00000592159 POGKQ9P215 609 aa13.63□□□□□ -0.23
KDM4B-209ENST00000592159 RALGAPBQ86X10 1494 aa13.62□□□□□ -0.23
KDM4B-209ENST00000592159 VPS72Q15906 364 aa13.62□□□□□ -0.23
KDM4B-209ENST00000592159 STAC3Q96MF2 364 aa13.62□□□□□ -0.23
KDM4B-209ENST00000592159 TECPR2O15040 1411 aa13.62□□□□□ -0.23
KDM4B-209ENST00000592159 BLMP54132 1417 aaPredicted RBP13.62□□□□□ -0.23
KDM4B-209ENST00000592159 YTHDC2Q9H6S0 1430 aaKnown RBP13.62□□□□□ -0.23
KDM4B-209ENST00000592159 CFAP70Q5T0N1 1121 aa13.61□□□□□ -0.23
KDM4B-209ENST00000592159 KRT27Q7Z3Y8 459 aa13.61□□□□□ -0.23
KDM4B-209ENST00000592159 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
KDM4B-209ENST00000592159 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
KDM4B-209ENST00000592159 C14orf93Q9H972 538 aaKnown RBP13.61□□□□□ -0.23
KDM4B-209ENST00000592159 SRCAPQ6ZRS2 3230 aa13.6□□□□□ -0.23
KDM4B-209ENST00000592159 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
KDM4B-209ENST00000592159 SLIT2O94813 1529 aa13.6□□□□□ -0.23
KDM4B-209ENST00000592159 DIEXFQ68CQ4 756 aaKnown RBP13.6□□□□□ -0.23
KDM4B-209ENST00000592159 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
KDM4B-209ENST00000592159 FAM83GA6ND36 823 aa13.59□□□□□ -0.23
KDM4B-209ENST00000592159 TRPM1Q7Z4N2 1603 aa13.58□□□□□ -0.24
KDM4B-209ENST00000592159 EP400Q96L91 3159 aa13.58□□□□□ -0.24
KDM4B-209ENST00000592159 NBPF1Q3BBV0 1214 aa13.58□□□□□ -0.24
KDM4B-209ENST00000592159 KIF1AQ12756 1690 aa13.58□□□□□ -0.24
KDM4B-209ENST00000592159 FMN2Q9NZ56 1722 aa13.58□□□□□ -0.24
KDM4B-209ENST00000592159 GLI3P10071 1580 aa13.58□□□□□ -0.24
KDM4B-209ENST00000592159 PIK3C2GO75747 1445 aa13.57□□□□□ -0.24
KDM4B-209ENST00000592159 TNS3Q68CZ2 1445 aa13.57□□□□□ -0.24
KDM4B-209ENST00000592159 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.57□□□□□ -0.24
KDM4B-209ENST00000592159 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
KDM4B-209ENST00000592159 BAG6P46379 1132 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms