RNA–Protein interactions for RNA: ENST00000592106.5

VMP1-214, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-214ENST00000592106 LRRC59Q96AG4 307 aaKnown RBP15.09■□□□□ 0.01
VMP1-214ENST00000592106 ANKRD30BQ9BXX2 1392 aa15.09■□□□□ 0.01
VMP1-214ENST00000592106 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
VMP1-214ENST00000592106 ROBO2Q9HCK4 1378 aa15.07■□□□□ 0
VMP1-214ENST00000592106 NUTM2BA6NNL0 878 aaPredicted RBP15.06■□□□□ 0
VMP1-214ENST00000592106 NUTM2EB1AL46 878 aaPredicted RBP15.06■□□□□ 0
VMP1-214ENST00000592106 NUTM2AQ8IVF1 878 aaPredicted RBP15.06■□□□□ 0
VMP1-214ENST00000592106 MPHOSPH9Q99550 1183 aa15.06■□□□□ 0
VMP1-214ENST00000592106 CDC42BPGQ6DT37 1551 aa15.05■□□□□ -0
VMP1-214ENST00000592106 IFT172Q9UG01 1749 aa15.04■□□□□ -0
VMP1-214ENST00000592106 SPATA31E1Q6ZUB1 1445 aa15.04■□□□□ -0
VMP1-214ENST00000592106 LAMC1P11047 1609 aa15.03■□□□□ -0
VMP1-214ENST00000592106 PNPLA6Q8IY17 1366 aa15.03■□□□□ -0
VMP1-214ENST00000592106 RGL3Q3MIN7 710 aa15.03■□□□□ -0
VMP1-214ENST00000592106 KNDC1Q76NI1 1749 aa15.02□□□□□ -0.01
VMP1-214ENST00000592106 TECPR2O15040 1411 aa15.01□□□□□ -0.01
VMP1-214ENST00000592106 LRPPRCP42704 1394 aaKnown RBP15.01□□□□□ -0.01
VMP1-214ENST00000592106 ADGRF5Q8IZF2 1346 aa15.01□□□□□ -0.01
VMP1-214ENST00000592106 PIK3C2GO75747 1445 aa15□□□□□ -0.01
VMP1-214ENST00000592106 AFF2P51816 1311 aa15□□□□□ -0.01
VMP1-214ENST00000592106 RXRBP28702 533 aa15□□□□□ -0.01
VMP1-214ENST00000592106 CDK12Q9NYV4 1490 aaPredicted RBP15□□□□□ -0.01
VMP1-214ENST00000592106 CACNB1Q02641 598 aaPredicted RBP14.99□□□□□ -0.01
VMP1-214ENST00000592106 DDX17Q92841 729 aaKnown RBP14.99□□□□□ -0.01
VMP1-214ENST00000592106 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
VMP1-214ENST00000592106 SOS2Q07890 1332 aaPredicted RBP14.98□□□□□ -0.01
VMP1-214ENST00000592106 NPHP3Q7Z494 1330 aa14.98□□□□□ -0.01
VMP1-214ENST00000592106 C8orf37Q96NL8 207 aa14.98□□□□□ -0.01
VMP1-214ENST00000592106 ORAI2Q96SN7 254 aa14.98□□□□□ -0.01
VMP1-214ENST00000592106 STK26Q9P289 416 aa14.98□□□□□ -0.01
VMP1-214ENST00000592106 MYOM2P54296 1465 aa14.97□□□□□ -0.01
VMP1-214ENST00000592106 ESCO1Q5FWF5 840 aa14.96□□□□□ -0.01
VMP1-214ENST00000592106 YTHDC2Q9H6S0 1430 aaKnown RBP14.96□□□□□ -0.01
VMP1-214ENST00000592106 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
VMP1-214ENST00000592106 ATXN8OSP0DMR3 200 aa14.94□□□□□ -0.02
VMP1-214ENST00000592106 NGLY1Q96IV0 654 aa14.94□□□□□ -0.02
VMP1-214ENST00000592106 COL22A1Q8NFW1 1626 aaPredicted RBP14.94□□□□□ -0.02
VMP1-214ENST00000592106 DHX57Q6P158 1386 aaKnown RBP14.94□□□□□ -0.02
VMP1-214ENST00000592106 KIF1AQ12756 1690 aa14.93□□□□□ -0.02
VMP1-214ENST00000592106 FMN2Q9NZ56 1722 aa14.93□□□□□ -0.02
VMP1-214ENST00000592106 ADAMTS2O95450 1211 aa14.93□□□□□ -0.02
VMP1-214ENST00000592106 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
VMP1-214ENST00000592106 TMEM132EQ6IEE7 984 aa14.93□□□□□ -0.02
VMP1-214ENST00000592106 WAPLQ7Z5K2 1190 aa14.93□□□□□ -0.02
VMP1-214ENST00000592106 NRXN1Q9ULB1 1477 aa14.93□□□□□ -0.02
VMP1-214ENST00000592106 SIRT1Q96EB6 747 aa14.92□□□□□ -0.02
VMP1-214ENST00000592106 PXDNQ92626 1479 aa14.91□□□□□ -0.02
VMP1-214ENST00000592106 C14orf93Q9H972 538 aaKnown RBP14.91□□□□□ -0.02
VMP1-214ENST00000592106 QTRT2Q9H974 415 aaKnown RBP14.91□□□□□ -0.02
VMP1-214ENST00000592106 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
VMP1-214ENST00000592106 NUTM2FA1L443 756 aa14.89□□□□□ -0.03
VMP1-214ENST00000592106 FOXO3O43524 673 aa14.89□□□□□ -0.03
VMP1-214ENST00000592106 UPF1Q92900 1129 aaKnown RBP eCLIP14.89□□□□□ -0.03
VMP1-214ENST00000592106 USP21Q9UK80 565 aa14.89□□□□□ -0.03
VMP1-214ENST00000592106 TRPC5Q9UL62 973 aaPredicted RBP14.89□□□□□ -0.03
VMP1-214ENST00000592106 RGS12O14924 1447 aa14.89□□□□□ -0.03
VMP1-214ENST00000592106 DLC1Q96QB1 1528 aa14.88□□□□□ -0.03
VMP1-214ENST00000592106 CFAP70Q5T0N1 1121 aa14.87□□□□□ -0.03
VMP1-214ENST00000592106 XPCQ01831 940 aaPredicted RBP14.86□□□□□ -0.03
VMP1-214ENST00000592106 FNBP4Q8N3X1 1017 aaPredicted RBP14.86□□□□□ -0.03
VMP1-214ENST00000592106 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
VMP1-214ENST00000592106 MARF1Q9Y4F3 1742 aaKnown RBP14.86□□□□□ -0.03
VMP1-214ENST00000592106 EIF3AQ14152 1382 aaKnown RBP14.85□□□□□ -0.03
VMP1-214ENST00000592106 PRAM1Q96QH2 718 aa14.85□□□□□ -0.03
VMP1-214ENST00000592106 POGKQ9P215 609 aa14.85□□□□□ -0.03
VMP1-214ENST00000592106 ADGRB2O60241 1585 aa14.85□□□□□ -0.03
VMP1-214ENST00000592106 ATRNO75882 1429 aa14.84□□□□□ -0.03
VMP1-214ENST00000592106 ANKARQ7Z5J8 1434 aa14.84□□□□□ -0.03
VMP1-214ENST00000592106 HRCP23327 699 aa14.84□□□□□ -0.03
VMP1-214ENST00000592106 PSME1Q06323 249 aa14.84□□□□□ -0.03
VMP1-214ENST00000592106 SPATA31A3Q5VYP0 1347 aa14.84□□□□□ -0.03
VMP1-214ENST00000592106 ATAD2Q6PL18 1390 aa14.84□□□□□ -0.03
VMP1-214ENST00000592106 TNS3Q68CZ2 1445 aa14.83□□□□□ -0.03
VMP1-214ENST00000592106 HAP1P54257 671 aaPredicted RBP14.83□□□□□ -0.04
VMP1-214ENST00000592106 KRT28Q7Z3Y7 464 aa14.83□□□□□ -0.04
VMP1-214ENST00000592106 PHF8Q9UPP1 1060 aa14.83□□□□□ -0.04
VMP1-214ENST00000592106 ADGRB1O14514 1584 aa14.82□□□□□ -0.04
VMP1-214ENST00000592106 SAFB2Q14151 953 aaKnown RBP eCLIP14.82□□□□□ -0.04
VMP1-214ENST00000592106 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.81□□□□□ -0.04
VMP1-214ENST00000592106 CAPN15O75808 1086 aa14.81□□□□□ -0.04
VMP1-214ENST00000592106 DCAF11Q8TEB1 546 aa14.81□□□□□ -0.04
VMP1-214ENST00000592106 SBNO1A3KN83 1393 aa14.81□□□□□ -0.04
VMP1-214ENST00000592106 ARHGEF10O15013 1369 aa14.81□□□□□ -0.04
VMP1-214ENST00000592106 USP32Q8NFA0 1604 aa14.81□□□□□ -0.04
VMP1-214ENST00000592106 SPINK5Q9NQ38 1064 aaPredicted RBP14.8□□□□□ -0.04
VMP1-214ENST00000592106 ZNF219Q9P2Y4 722 aaPredicted RBP14.8□□□□□ -0.04
VMP1-214ENST00000592106 KDM2AQ9Y2K7 1162 aa14.8□□□□□ -0.04
VMP1-214ENST00000592106 RGPD8O14715 1765 aaPredicted RBP14.79□□□□□ -0.04
VMP1-214ENST00000592106 TRAK1Q9UPV9 953 aa14.79□□□□□ -0.04
VMP1-214ENST00000592106 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
VMP1-214ENST00000592106 BCL9LQ86UU0 1499 aa14.78□□□□□ -0.04
VMP1-214ENST00000592106 GPRASP1Q5JY77 1395 aa14.77□□□□□ -0.04
VMP1-214ENST00000592106 LMOD2Q6P5Q4 547 aa14.77□□□□□ -0.05
VMP1-214ENST00000592106 SLIT2O94813 1529 aa14.76□□□□□ -0.05
VMP1-214ENST00000592106 UNC5CLQ8IV45 518 aa14.76□□□□□ -0.05
VMP1-214ENST00000592106 GJD4Q96KN9 370 aaPredicted RBP14.76□□□□□ -0.05
VMP1-214ENST00000592106 MINK1Q8N4C8 1332 aaPredicted RBP14.75□□□□□ -0.05
VMP1-214ENST00000592106 ABCA3Q99758 1704 aa14.75□□□□□ -0.05
VMP1-214ENST00000592106 PMFBP1Q8TBY8 1022 aa14.74□□□□□ -0.05
VMP1-214ENST00000592106 HIRIP3Q9BW71 556 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms