RNA–Protein interactions for RNA: ENST00000591709.1

POLR2E-208, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-208ENST00000591709 ROBO2Q9HCK4 1378 aa25.91■■□□□ 1.74
POLR2E-208ENST00000591709 PPLO60437 1756 aa25.9■■□□□ 1.74
POLR2E-208ENST00000591709 FOXD1Q16676 465 aa25.9■■□□□ 1.74
POLR2E-208ENST00000591709 CDC42BPGQ6DT37 1551 aa25.87■■□□□ 1.73
POLR2E-208ENST00000591709 BCL9LQ86UU0 1499 aa25.86■■□□□ 1.73
POLR2E-208ENST00000591709 PXDNQ92626 1479 aa25.85■■□□□ 1.73
POLR2E-208ENST00000591709 PRAG1Q86YV5 1406 aa25.85■■□□□ 1.73
POLR2E-208ENST00000591709 GLI3P10071 1580 aa25.83■■□□□ 1.73
POLR2E-208ENST00000591709 HFM1A2PYH4 1435 aa25.81■■□□□ 1.72
POLR2E-208ENST00000591709 CCDC125Q86Z20 511 aa25.8■■□□□ 1.72
POLR2E-208ENST00000591709 NPHP3Q7Z494 1330 aa25.79■■□□□ 1.72
POLR2E-208ENST00000591709 XPCQ01831 940 aaPredicted RBP25.77■■□□□ 1.72
POLR2E-208ENST00000591709 GJD4Q96KN9 370 aaPredicted RBP25.77■■□□□ 1.72
POLR2E-208ENST00000591709 LRP5O75197 1615 aa25.77■■□□□ 1.72
POLR2E-208ENST00000591709 USP32Q8NFA0 1604 aa25.77■■□□□ 1.72
POLR2E-208ENST00000591709 ESCO1Q5FWF5 840 aa25.76■■□□□ 1.71
POLR2E-208ENST00000591709 PLCH1Q4KWH8 1693 aa25.75■■□□□ 1.71
POLR2E-208ENST00000591709 RALGAPBQ86X10 1494 aa25.75■■□□□ 1.71
POLR2E-208ENST00000591709 BLMP54132 1417 aaPredicted RBP25.75■■□□□ 1.71
POLR2E-208ENST00000591709 RGPD8O14715 1765 aaPredicted RBP25.74■■□□□ 1.71
POLR2E-208ENST00000591709 VGFO15240 615 aaPredicted RBP25.74■■□□□ 1.71
POLR2E-208ENST00000591709 FMN2Q9NZ56 1722 aa25.74■■□□□ 1.71
POLR2E-208ENST00000591709 KIF1AQ12756 1690 aa25.74■■□□□ 1.71
POLR2E-208ENST00000591709 KNDC1Q76NI1 1749 aa25.72■■□□□ 1.71
POLR2E-208ENST00000591709 ABCA3Q99758 1704 aa25.71■■□□□ 1.71
POLR2E-208ENST00000591709 FOXO3O43524 673 aa25.71■■□□□ 1.71
POLR2E-208ENST00000591709 SLIT2O94813 1529 aa25.71■■□□□ 1.71
POLR2E-208ENST00000591709 NAIPQ13075 1403 aa25.71■■□□□ 1.71
POLR2E-208ENST00000591709 IFT172Q9UG01 1749 aa25.7■■□□□ 1.7
POLR2E-208ENST00000591709 NWD2Q9ULI1 1742 aa25.69■■□□□ 1.7
POLR2E-208ENST00000591709 DEFB132Q7Z7B7 95 aa25.68■■□□□ 1.7
POLR2E-208ENST00000591709 NUTM2FA1L443 756 aa25.67■■□□□ 1.7
POLR2E-208ENST00000591709 UNC5CLQ8IV45 518 aa25.66■■□□□ 1.7
POLR2E-208ENST00000591709 LRPPRCP42704 1394 aaKnown RBP25.66■■□□□ 1.7
POLR2E-208ENST00000591709 RPGRIP1LQ68CZ1 1315 aa25.63■■□□□ 1.69
POLR2E-208ENST00000591709 PPARGC1BQ86YN6 1023 aaKnown RBP25.61■■□□□ 1.69
POLR2E-208ENST00000591709 SF3B2Q13435 895 aaKnown RBP25.6■■□□□ 1.69
POLR2E-208ENST00000591709 CCDC144AA2RUR9 1427 aa25.6■■□□□ 1.69
POLR2E-208ENST00000591709 TECPR2O15040 1411 aa25.6■■□□□ 1.69
POLR2E-208ENST00000591709 SPATA31A3Q5VYP0 1347 aa25.6■■□□□ 1.69
POLR2E-208ENST00000591709 WAPLQ7Z5K2 1190 aa25.58■■□□□ 1.69
POLR2E-208ENST00000591709 STK26Q9P289 416 aa25.58■■□□□ 1.69
POLR2E-208ENST00000591709 PLEKHH1Q9ULM0 1364 aa25.57■■□□□ 1.68
POLR2E-208ENST00000591709 NRAPQ86VF7 1730 aa25.57■■□□□ 1.68
POLR2E-208ENST00000591709 RRBP1Q9P2E9 1410 aaKnown RBP25.57■■□□□ 1.68
POLR2E-208ENST00000591709 SEPT12Q8IYM1 358 aa25.57■■□□□ 1.68
POLR2E-208ENST00000591709 RGPD1P0DJD0 1748 aa25.56■■□□□ 1.68
POLR2E-208ENST00000591709 TNS3Q68CZ2 1445 aa25.55■■□□□ 1.68
POLR2E-208ENST00000591709 HAP1P54257 671 aaPredicted RBP25.54■■□□□ 1.68
POLR2E-208ENST00000591709 ADGRF5Q8IZF2 1346 aa25.54■■□□□ 1.68
POLR2E-208ENST00000591709 PLEKHG5O94827 1062 aa25.53■■□□□ 1.68
POLR2E-208ENST00000591709 PSDA5PKW4 1024 aaPredicted RBP25.52■■□□□ 1.68
POLR2E-208ENST00000591709 CCDC9Q9Y3X0 531 aaKnown RBP25.52■■□□□ 1.68
POLR2E-208ENST00000591709 VPS72Q15906 364 aa25.51■■□□□ 1.67
POLR2E-208ENST00000591709 KRT28Q7Z3Y7 464 aa25.51■■□□□ 1.67
POLR2E-208ENST00000591709 KRT27Q7Z3Y8 459 aa25.5■■□□□ 1.67
POLR2E-208ENST00000591709 CABLES1Q8TDN4 633 aa25.5■■□□□ 1.67
POLR2E-208ENST00000591709 SLC4A1APQ9BWU0 796 aaKnown RBP25.5■■□□□ 1.67
POLR2E-208ENST00000591709 TNS1Q9HBL0 1735 aaKnown RBP25.49■■□□□ 1.67
POLR2E-208ENST00000591709 ABCC11Q96J66 1382 aa25.48■■□□□ 1.67
POLR2E-208ENST00000591709 TMEM132EQ6IEE7 984 aa25.47■■□□□ 1.67
POLR2E-208ENST00000591709 A0A0G2JS52 829 aa25.46■■□□□ 1.67
POLR2E-208ENST00000591709 MYT1Q01538 1121 aa25.46■■□□□ 1.67
POLR2E-208ENST00000591709 TRPM3Q9HCF6 1732 aaPredicted RBP25.46■■□□□ 1.67
POLR2E-208ENST00000591709 PIK3C2GO75747 1445 aa25.46■■□□□ 1.67
POLR2E-208ENST00000591709 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
POLR2E-208ENST00000591709 BAG6P46379 1132 aa25.45■■□□□ 1.66
POLR2E-208ENST00000591709 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.66
POLR2E-208ENST00000591709 ONECUT3O60422 494 aaPredicted RBP25.44■■□□□ 1.66
POLR2E-208ENST00000591709 HRCP23327 699 aa25.44■■□□□ 1.66
POLR2E-208ENST00000591709 SPATA31E1Q6ZUB1 1445 aa25.44■■□□□ 1.66
POLR2E-208ENST00000591709 COL14A1Q05707 1796 aaKnown RBP25.44■■□□□ 1.66
POLR2E-208ENST00000591709 RGL3Q3MIN7 710 aa25.43■■□□□ 1.66
POLR2E-208ENST00000591709 PHF8Q9UPP1 1060 aa25.43■■□□□ 1.66
POLR2E-208ENST00000591709 LMOD2Q6P5Q4 547 aa25.42■■□□□ 1.66
POLR2E-208ENST00000591709 ANKRD30BQ9BXX2 1392 aa25.42■■□□□ 1.66
POLR2E-208ENST00000591709 ALS2Q96Q42 1657 aa25.42■■□□□ 1.66
POLR2E-208ENST00000591709 SBNO1A3KN83 1393 aa25.41■■□□□ 1.66
POLR2E-208ENST00000591709 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
POLR2E-208ENST00000591709 PSME1Q06323 249 aa25.4■■□□□ 1.66
POLR2E-208ENST00000591709 ARHGEF10O15013 1369 aa25.4■■□□□ 1.66
POLR2E-208ENST00000591709 THSD7AQ9UPZ6 1657 aa25.39■■□□□ 1.65
POLR2E-208ENST00000591709 FAM98CQ17RN3 349 aaKnown RBP25.38■■□□□ 1.65
POLR2E-208ENST00000591709 ADGRB2O60241 1585 aa25.38■■□□□ 1.65
POLR2E-208ENST00000591709 FAM83GA6ND36 823 aa25.36■■□□□ 1.65
POLR2E-208ENST00000591709 EN1Q05925 392 aaPredicted RBP25.36■■□□□ 1.65
POLR2E-208ENST00000591709 FAM182BQ5T319 152 aa25.34■■□□□ 1.65
POLR2E-208ENST00000591709 R3HDM1Q15032 1099 aaKnown RBP25.32■■□□□ 1.64
POLR2E-208ENST00000591709 BTG4Q9NY30 223 aa25.32■■□□□ 1.64
POLR2E-208ENST00000591709 SAFB2Q14151 953 aaKnown RBP eCLIP25.31■■□□□ 1.64
POLR2E-208ENST00000591709 PMFBP1Q8TBY8 1022 aa25.3■■□□□ 1.64
POLR2E-208ENST00000591709 RREB1Q92766 1687 aa25.29■■□□□ 1.64
POLR2E-208ENST00000591709 DISP2A7MBM2 1401 aa25.29■■□□□ 1.64
POLR2E-208ENST00000591709 ANKARQ7Z5J8 1434 aa25.29■■□□□ 1.64
POLR2E-208ENST00000591709 SIRT1Q96EB6 747 aa25.28■■□□□ 1.64
POLR2E-208ENST00000591709 NUP188Q5SRE5 1749 aa25.27■■□□□ 1.64
POLR2E-208ENST00000591709 PRAM1Q96QH2 718 aa25.26■■□□□ 1.63
POLR2E-208ENST00000591709 DHX57Q6P158 1386 aaKnown RBP25.26■■□□□ 1.63
POLR2E-208ENST00000591709 DLC1Q96QB1 1528 aa25.26■■□□□ 1.63
POLR2E-208ENST00000591709 PHRF1Q9P1Y6 1649 aaKnown RBP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms