RNA–Protein interactions for RNA: ENST00000591598.5

CTDP1-207, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best)

Gene CTDP1, Length 3,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-207ENST00000591598 MINK1Q8N4C8 1332 aaPredicted RBP21.76■■□□□ 1.07
CTDP1-207ENST00000591598 STAG3Q9UJ98 1225 aa21.76■■□□□ 1.07
CTDP1-207ENST00000591598 CGNL1Q0VF96 1302 aa21.76■■□□□ 1.07
CTDP1-207ENST00000591598 U2SURPO15042 1029 aaKnown RBP21.75■■□□□ 1.07
CTDP1-207ENST00000591598 CLUAP1Q96AJ1 413 aa21.75■■□□□ 1.07
CTDP1-207ENST00000591598 EVC2Q86UK5 1308 aa21.75■■□□□ 1.07
CTDP1-207ENST00000591598 NKTRP30414 1462 aaKnown RBP21.75■■□□□ 1.07
CTDP1-207ENST00000591598 GGNBP2Q9H3C7 697 aa21.74■■□□□ 1.07
CTDP1-207ENST00000591598 CFAP53Q96M91 514 aa21.73■■□□□ 1.07
CTDP1-207ENST00000591598 KDM2BQ8NHM5 1336 aa21.73■■□□□ 1.07
CTDP1-207ENST00000591598 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
CTDP1-207ENST00000591598 POGKQ9P215 609 aa21.72■■□□□ 1.07
CTDP1-207ENST00000591598 TRMT2AQ8IZ69 625 aaKnown RBP21.72■■□□□ 1.07
CTDP1-207ENST00000591598 RUNDC1Q96C34 613 aa21.72■■□□□ 1.07
CTDP1-207ENST00000591598 MLECQ14165 292 aa21.71■■□□□ 1.07
CTDP1-207ENST00000591598 ADGRB3O60242 1522 aa21.71■■□□□ 1.07
CTDP1-207ENST00000591598 TNNQ9UQP3 1299 aa21.7■■□□□ 1.07
CTDP1-207ENST00000591598 KIAA1210Q9ULL0 1709 aa21.7■■□□□ 1.06
CTDP1-207ENST00000591598 FRMPD1Q5SYB0 1578 aa21.7■■□□□ 1.06
CTDP1-207ENST00000591598 DAXXQ9UER7 740 aaPredicted RBP21.69■■□□□ 1.06
CTDP1-207ENST00000591598 PPM1GO15355 546 aaPredicted RBP21.68■■□□□ 1.06
CTDP1-207ENST00000591598 IGHDP01880 384 aa21.68■■□□□ 1.06
CTDP1-207ENST00000591598 POLR3AO14802 1390 aaPredicted RBP21.68■■□□□ 1.06
CTDP1-207ENST00000591598 PRAM1Q96QH2 718 aa21.68■■□□□ 1.06
CTDP1-207ENST00000591598 RPGRIP1LQ68CZ1 1315 aa21.68■■□□□ 1.06
CTDP1-207ENST00000591598 SBNO2Q9Y2G9 1366 aa21.68■■□□□ 1.06
CTDP1-207ENST00000591598 MLH3Q9UHC1 1453 aa21.68■■□□□ 1.06
CTDP1-207ENST00000591598 NRXN1Q9ULB1 1477 aa21.67■■□□□ 1.06
CTDP1-207ENST00000591598 NEFMP07197 916 aa21.67■■□□□ 1.06
CTDP1-207ENST00000591598 ABCC3O15438 1527 aa21.66■■□□□ 1.06
CTDP1-207ENST00000591598 HECW2Q9P2P5 1572 aa21.66■■□□□ 1.06
CTDP1-207ENST00000591598 YEATS2Q9ULM3 1422 aa21.66■■□□□ 1.06
CTDP1-207ENST00000591598 LMTK2Q8IWU2 1503 aa21.65■■□□□ 1.06
CTDP1-207ENST00000591598 TSR2Q969E8 191 aaKnown RBP21.64■■□□□ 1.05
CTDP1-207ENST00000591598 FBLN1P23142 703 aa21.64■■□□□ 1.05
CTDP1-207ENST00000591598 FAM161AQ3B820 660 aa21.63■■□□□ 1.05
CTDP1-207ENST00000591598 QRICH2Q9H0J4 1663 aa21.63■■□□□ 1.05
CTDP1-207ENST00000591598 IFT172Q9UG01 1749 aa21.62■■□□□ 1.05
CTDP1-207ENST00000591598 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
CTDP1-207ENST00000591598 ADGRB1O14514 1584 aa21.62■■□□□ 1.05
CTDP1-207ENST00000591598 RARSP54136 660 aaKnown RBP21.61■■□□□ 1.05
CTDP1-207ENST00000591598 RLBP1P12271 317 aa21.61■■□□□ 1.05
CTDP1-207ENST00000591598 FAM69CQ0P6D2 419 aa21.61■■□□□ 1.05
CTDP1-207ENST00000591598 C8orf34Q49A92 452 aa21.6■■□□□ 1.05
CTDP1-207ENST00000591598 NEURL4Q96JN8 1562 aa21.59■■□□□ 1.05
CTDP1-207ENST00000591598 SLC52A1Q9NWF4 448 aa21.59■■□□□ 1.05
CTDP1-207ENST00000591598 PPLO60437 1756 aa21.59■■□□□ 1.05
CTDP1-207ENST00000591598 A0A1W2PP64 1363 aa21.58■■□□□ 1.05
CTDP1-207ENST00000591598 ANKRD36BQ8N2N9 1353 aa21.58■■□□□ 1.04
CTDP1-207ENST00000591598 PDE3AQ14432 1141 aa21.57■■□□□ 1.04
CTDP1-207ENST00000591598 DDRGK1Q96HY6 314 aa21.57■■□□□ 1.04
CTDP1-207ENST00000591598 SETBP1Q9Y6X0 1596 aa21.57■■□□□ 1.04
CTDP1-207ENST00000591598 NGEFQ8N5V2 710 aa21.57■■□□□ 1.04
CTDP1-207ENST00000591598 CABP1Q9NZU7 370 aa21.57■■□□□ 1.04
CTDP1-207ENST00000591598 MAPK8IP3Q9UPT6 1336 aa21.56■■□□□ 1.04
CTDP1-207ENST00000591598 WAPLQ7Z5K2 1190 aa21.56■■□□□ 1.04
CTDP1-207ENST00000591598 GLI2P10070 1586 aa21.56■■□□□ 1.04
CTDP1-207ENST00000591598 SIGLEC1Q9BZZ2 1709 aa21.56■■□□□ 1.04
CTDP1-207ENST00000591598 TERF2IPQ9NYB0 399 aa21.55■■□□□ 1.04
CTDP1-207ENST00000591598 FTSJ3Q8IY81 847 aaKnown RBP21.54■■□□□ 1.04
CTDP1-207ENST00000591598 TULP4Q9NRJ4 1543 aa21.54■■□□□ 1.04
CTDP1-207ENST00000591598 CDK19Q9BWU1 502 aa21.54■■□□□ 1.04
CTDP1-207ENST00000591598 CAMSAP1Q5T5Y3 1602 aa21.54■■□□□ 1.04
CTDP1-207ENST00000591598 FYB1O15117 783 aa21.53■■□□□ 1.04
CTDP1-207ENST00000591598 MYH16Q9H6N6 1097 aa21.53■■□□□ 1.04
CTDP1-207ENST00000591598 PCDHB15Q9Y5E8 787 aa21.53■■□□□ 1.04
CTDP1-207ENST00000591598 WDR63Q8IWG1 891 aa21.53■■□□□ 1.04
CTDP1-207ENST00000591598 CFAP74Q9C0B2 1584 aa21.53■■□□□ 1.04
CTDP1-207ENST00000591598 MYO3AQ8NEV4 1616 aa21.52■■□□□ 1.04
CTDP1-207ENST00000591598 EXOSC9Q06265 439 aaKnown RBP21.52■■□□□ 1.04
CTDP1-207ENST00000591598 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
CTDP1-207ENST00000591598 NEXMIFQ5QGS0 1516 aa21.5■■□□□ 1.03
CTDP1-207ENST00000591598 HDGFL2Q7Z4V5 671 aaPredicted RBP21.5■■□□□ 1.03
CTDP1-207ENST00000591598 NEO1Q92859 1461 aa21.5■■□□□ 1.03
CTDP1-207ENST00000591598 DIP2CQ9Y2E4 1556 aa21.5■■□□□ 1.03
CTDP1-207ENST00000591598 RIPK4P57078 832 aa21.49■■□□□ 1.03
CTDP1-207ENST00000591598 TMPOP42166 694 aaKnown RBP21.49■■□□□ 1.03
CTDP1-207ENST00000591598 SEC24BO95487 1268 aa21.48■■□□□ 1.03
CTDP1-207ENST00000591598 RTN4Q9NQC3 1192 aaKnown RBP21.48■■□□□ 1.03
CTDP1-207ENST00000591598 HMOX1P09601 288 aa21.47■■□□□ 1.03
CTDP1-207ENST00000591598 PLPPR3Q6T4P5 718 aa21.47■■□□□ 1.03
CTDP1-207ENST00000591598 DIAPH1O60610 1272 aaKnown RBP21.46■■□□□ 1.03
CTDP1-207ENST00000591598 SHPRHQ149N8 1683 aa21.46■■□□□ 1.03
CTDP1-207ENST00000591598 ITPRIPQ8IWB1 547 aa21.46■■□□□ 1.03
CTDP1-207ENST00000591598 PHF23Q9BUL5 403 aaPredicted RBP21.46■■□□□ 1.03
CTDP1-207ENST00000591598 YTHDC2Q9H6S0 1430 aaKnown RBP21.45■■□□□ 1.02
CTDP1-207ENST00000591598 ZKSCAN2Q63HK3 967 aa21.44■■□□□ 1.02
CTDP1-207ENST00000591598 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
CTDP1-207ENST00000591598 ARHGEF28Q8N1W1 1705 aaKnown RBP21.43■■□□□ 1.02
CTDP1-207ENST00000591598 ZC3H13Q5T200 1668 aaKnown RBP21.43■■□□□ 1.02
CTDP1-207ENST00000591598 DZIP1LQ8IYY4 767 aaKnown RBP21.43■■□□□ 1.02
CTDP1-207ENST00000591598 PIK3C2BO00750 1634 aa21.43■■□□□ 1.02
CTDP1-207ENST00000591598 ABCC11Q96J66 1382 aa21.43■■□□□ 1.02
CTDP1-207ENST00000591598 PMFBP1Q8TBY8 1022 aa21.43■■□□□ 1.02
CTDP1-207ENST00000591598 SSH1Q8WYL5 1049 aa21.43■■□□□ 1.02
CTDP1-207ENST00000591598 THUMPD2Q9BTF0 503 aaKnown RBP21.43■■□□□ 1.02
CTDP1-207ENST00000591598 TRIM35Q9UPQ4 493 aa21.43■■□□□ 1.02
CTDP1-207ENST00000591598 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
CTDP1-207ENST00000591598 NUTM2FA1L443 756 aa21.42■■□□□ 1.02
CTDP1-207ENST00000591598 ATAD2Q6PL18 1390 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms