RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 FBXO22Q8NEZ5 403 aa9.41□□□□□ -0.9
VPS4B-205ENST00000591383 KDM5AP29375 1690 aaKnown RBP9.41□□□□□ -0.9
VPS4B-205ENST00000591383 NLRP6P59044 892 aa9.4□□□□□ -0.9
VPS4B-205ENST00000591383 E2F4Q16254 413 aa9.4□□□□□ -0.9
VPS4B-205ENST00000591383 EFCAB3Q8N7B9 438 aa9.4□□□□□ -0.9
VPS4B-205ENST00000591383 MPHOSPH9Q99550 1183 aa9.4□□□□□ -0.9
VPS4B-205ENST00000591383 CCDC144AA2RUR9 1427 aa9.39□□□□□ -0.91
VPS4B-205ENST00000591383 PTPRTO14522 1441 aa9.39□□□□□ -0.91
VPS4B-205ENST00000591383 TMEM131LA2VDJ0 1609 aa9.39□□□□□ -0.91
VPS4B-205ENST00000591383 BRPF1P55201 1214 aaPredicted RBP9.39□□□□□ -0.91
VPS4B-205ENST00000591383 IFNL1Q8IU54 200 aa9.39□□□□□ -0.91
VPS4B-205ENST00000591383 SOX12O15370 315 aa9.38□□□□□ -0.91
VPS4B-205ENST00000591383 ZC3H15Q8WU90 426 aaKnown RBP9.38□□□□□ -0.91
VPS4B-205ENST00000591383 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
VPS4B-205ENST00000591383 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
VPS4B-205ENST00000591383 PRKAR2AP13861 404 aaKnown RBP9.37□□□□□ -0.91
VPS4B-205ENST00000591383 HSPA2P54652 639 aa9.37□□□□□ -0.91
VPS4B-205ENST00000591383 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
VPS4B-205ENST00000591383 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
VPS4B-205ENST00000591383 TESPA1A2RU30 521 aaPredicted RBP9.36□□□□□ -0.91
VPS4B-205ENST00000591383 SEMA3EO15041 775 aa9.36□□□□□ -0.91
VPS4B-205ENST00000591383 HRCP23327 699 aa9.36□□□□□ -0.91
VPS4B-205ENST00000591383 NEURL4Q96JN8 1562 aa9.36□□□□□ -0.91
VPS4B-205ENST00000591383 IQGAP1P46940 1657 aa9.36□□□□□ -0.91
VPS4B-205ENST00000591383 MAP3K13O43283 966 aa9.35□□□□□ -0.91
VPS4B-205ENST00000591383 IFT172Q9UG01 1749 aa9.35□□□□□ -0.91
VPS4B-205ENST00000591383 PPLO60437 1756 aa9.35□□□□□ -0.91
VPS4B-205ENST00000591383 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
VPS4B-205ENST00000591383 SCAF11Q99590 1463 aaKnown RBP9.34□□□□□ -0.91
VPS4B-205ENST00000591383 KIF12Q96FN5 646 aa9.34□□□□□ -0.91
VPS4B-205ENST00000591383 SLC52A1Q9NWF4 448 aa9.34□□□□□ -0.91
VPS4B-205ENST00000591383 SLIT1O75093 1534 aa9.34□□□□□ -0.91
VPS4B-205ENST00000591383 NEXMIFQ5QGS0 1516 aa9.33□□□□□ -0.92
VPS4B-205ENST00000591383 IDI1Q13907 227 aa9.33□□□□□ -0.92
VPS4B-205ENST00000591383 C14orf37Q86TY3 774 aa9.33□□□□□ -0.92
VPS4B-205ENST00000591383 ANKRD30BQ9BXX2 1392 aa9.33□□□□□ -0.92
VPS4B-205ENST00000591383 ARHGAP23Q9P227 1491 aa9.33□□□□□ -0.92
VPS4B-205ENST00000591383 NCKAP5LQ9HCH0 1330 aa9.32□□□□□ -0.92
VPS4B-205ENST00000591383 RIMS2Q9UQ26 1411 aa9.32□□□□□ -0.92
VPS4B-205ENST00000591383 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
VPS4B-205ENST00000591383 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
VPS4B-205ENST00000591383 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
VPS4B-205ENST00000591383 PPP1R15AO75807 674 aaPredicted RBP9.31□□□□□ -0.92
VPS4B-205ENST00000591383 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
VPS4B-205ENST00000591383 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
VPS4B-205ENST00000591383 TMEM2Q9UHN6 1383 aa9.31□□□□□ -0.92
VPS4B-205ENST00000591383 SPATA31E1Q6ZUB1 1445 aa9.31□□□□□ -0.92
VPS4B-205ENST00000591383 THEMISQ8N1K5 641 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-205ENST00000591383 NPHP4O75161 1426 aaPredicted RBP9.3□□□□□ -0.92
VPS4B-205ENST00000591383 PDE4AP27815 886 aa9.29□□□□□ -0.92
VPS4B-205ENST00000591383 NEUROD2Q15784 382 aa9.29□□□□□ -0.92
VPS4B-205ENST00000591383 ARXQ96QS3 562 aa9.29□□□□□ -0.92
VPS4B-205ENST00000591383 LARP6Q9BRS8 491 aaKnown RBP9.29□□□□□ -0.92
VPS4B-205ENST00000591383 NRXN3Q9Y4C0 1643 aa9.28□□□□□ -0.92
VPS4B-205ENST00000591383 MFSD10Q14728 455 aa9.28□□□□□ -0.92
VPS4B-205ENST00000591383 RGL3Q3MIN7 710 aa9.28□□□□□ -0.92
VPS4B-205ENST00000591383 NUTM2DQ5VT03 806 aaPredicted RBP9.28□□□□□ -0.92
VPS4B-205ENST00000591383 EID1Q9Y6B2 187 aa9.28□□□□□ -0.92
VPS4B-205ENST00000591383 DIP2AQ14689 1571 aa9.28□□□□□ -0.92
VPS4B-205ENST00000591383 LAMC1P11047 1609 aa9.27□□□□□ -0.92
VPS4B-205ENST00000591383 ANKLE2Q86XL3 938 aa9.27□□□□□ -0.93
VPS4B-205ENST00000591383 CCER1Q8TC90 406 aaPredicted RBP9.27□□□□□ -0.93
VPS4B-205ENST00000591383 MS4A4AQ96JQ5 239 aa9.27□□□□□ -0.93
VPS4B-205ENST00000591383 SETBP1Q9Y6X0 1596 aa9.27□□□□□ -0.93
VPS4B-205ENST00000591383 MYOM2P54296 1465 aa9.27□□□□□ -0.93
VPS4B-205ENST00000591383 ZMYND10O75800 440 aa9.26□□□□□ -0.93
VPS4B-205ENST00000591383 NEUROD1Q13562 356 aa9.26□□□□□ -0.93
VPS4B-205ENST00000591383 TXNDC2Q86VQ3 553 aa9.26□□□□□ -0.93
VPS4B-205ENST00000591383 MED14O60244 1454 aa9.26□□□□□ -0.93
VPS4B-205ENST00000591383 PLEKHG1Q9ULL1 1385 aa9.25□□□□□ -0.93
VPS4B-205ENST00000591383 SETD1AO15047 1707 aaKnown RBP9.25□□□□□ -0.93
VPS4B-205ENST00000591383 LTKP29376 864 aa9.25□□□□□ -0.93
VPS4B-205ENST00000591383 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
VPS4B-205ENST00000591383 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS4B-205ENST00000591383 CRISPLD2Q9H0B8 497 aa9.25□□□□□ -0.93
VPS4B-205ENST00000591383 ARIH1Q9Y4X5 557 aaPredicted RBP9.25□□□□□ -0.93
VPS4B-205ENST00000591383 TONSLQ96HA7 1378 aa9.24□□□□□ -0.93
VPS4B-205ENST00000591383 SIN3AQ96ST3 1273 aa9.24□□□□□ -0.93
VPS4B-205ENST00000591383 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
VPS4B-205ENST00000591383 NWD1Q149M9 1564 aa9.23□□□□□ -0.93
VPS4B-205ENST00000591383 PIK3C2GO75747 1445 aa9.22□□□□□ -0.93
VPS4B-205ENST00000591383 STRCP1A6NGW2 1772 aa9.22□□□□□ -0.93
VPS4B-205ENST00000591383 ASXL1Q8IXJ9 1541 aa9.22□□□□□ -0.93
VPS4B-205ENST00000591383 ALKQ9UM73 1620 aa9.22□□□□□ -0.93
VPS4B-205ENST00000591383 RPGRIP1LQ68CZ1 1315 aa9.22□□□□□ -0.93
VPS4B-205ENST00000591383 XRN1Q8IZH2 1706 aaKnown RBP9.22□□□□□ -0.93
VPS4B-205ENST00000591383 ADAMTS13Q76LX8 1427 aa9.22□□□□□ -0.93
VPS4B-205ENST00000591383 NRXN1Q9ULB1 1477 aa9.21□□□□□ -0.93
VPS4B-205ENST00000591383 HDGFP51858 240 aaKnown RBP9.21□□□□□ -0.94
VPS4B-205ENST00000591383 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
VPS4B-205ENST00000591383 SLC26A8Q96RN1 970 aa9.21□□□□□ -0.94
VPS4B-205ENST00000591383 TRPM1Q7Z4N2 1603 aa9.2□□□□□ -0.94
VPS4B-205ENST00000591383 KIAA1210Q9ULL0 1709 aa9.2□□□□□ -0.94
VPS4B-205ENST00000591383 BARGINQ6ZT62 677 aa9.2□□□□□ -0.94
VPS4B-205ENST00000591383 DCAF11Q8TEB1 546 aa9.2□□□□□ -0.94
VPS4B-205ENST00000591383 ADGRF5Q8IZF2 1346 aa9.2□□□□□ -0.94
VPS4B-205ENST00000591383 CLSPNQ9HAW4 1339 aa9.2□□□□□ -0.94
VPS4B-205ENST00000591383 KNDC1Q76NI1 1749 aa9.19□□□□□ -0.94
VPS4B-205ENST00000591383 CHD2O14647 1828 aaKnown RBP9.19□□□□□ -0.94
VPS4B-205ENST00000591383 ZRANB1Q9UGI0 708 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms