RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 ATAD2Q6PL18 1390 aa27.08■■□□□ 1.93
GCDH-214ENST00000591043 HDGFP51858 240 aaKnown RBP27.08■■□□□ 1.93
GCDH-214ENST00000591043 SETD1AO15047 1707 aaKnown RBP27.08■■□□□ 1.93
GCDH-214ENST00000591043 TSHZ2Q9NRE2 1034 aa27.07■■□□□ 1.92
GCDH-214ENST00000591043 POLR3AO14802 1390 aaPredicted RBP27.06■■□□□ 1.92
GCDH-214ENST00000591043 CGNL1Q0VF96 1302 aa27.06■■□□□ 1.92
GCDH-214ENST00000591043 MLECQ14165 292 aa27.06■■□□□ 1.92
GCDH-214ENST00000591043 NGEFQ8N5V2 710 aa27.06■■□□□ 1.92
GCDH-214ENST00000591043 ADAMTS8Q9UP79 889 aa27.05■■□□□ 1.92
GCDH-214ENST00000591043 SLC12A5Q9H2X9 1139 aa27.04■■□□□ 1.92
GCDH-214ENST00000591043 MYT1Q01538 1121 aa27.03■■□□□ 1.92
GCDH-214ENST00000591043 IRX6P78412 446 aaPredicted RBP27.02■■□□□ 1.92
GCDH-214ENST00000591043 TNRQ92752 1358 aa27.02■■□□□ 1.92
GCDH-214ENST00000591043 POGKQ9P215 609 aa27.02■■□□□ 1.92
GCDH-214ENST00000591043 MORC1Q86VD1 984 aa27■■□□□ 1.91
GCDH-214ENST00000591043 STK26Q9P289 416 aa26.99■■□□□ 1.91
GCDH-214ENST00000591043 KNDC1Q76NI1 1749 aa26.99■■□□□ 1.91
GCDH-214ENST00000591043 ABCC11Q96J66 1382 aa26.98■■□□□ 1.91
GCDH-214ENST00000591043 PRAM1Q96QH2 718 aa26.97■■□□□ 1.91
GCDH-214ENST00000591043 UBR1Q8IWV7 1749 aa26.97■■□□□ 1.91
GCDH-214ENST00000591043 ANKRD26Q9UPS8 1709 aa26.97■■□□□ 1.91
GCDH-214ENST00000591043 NRXN3Q9Y4C0 1643 aa26.97■■□□□ 1.91
GCDH-214ENST00000591043 RCAN3Q9UKA8 241 aa26.96■■□□□ 1.91
GCDH-214ENST00000591043 NLRP1Q9C000 1473 aa26.95■■□□□ 1.91
GCDH-214ENST00000591043 TERF2IPQ9NYB0 399 aa26.95■■□□□ 1.9
GCDH-214ENST00000591043 SRPK2P78362 688 aaKnown RBP26.94■■□□□ 1.9
GCDH-214ENST00000591043 MED14O60244 1454 aa26.94■■□□□ 1.9
GCDH-214ENST00000591043 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
GCDH-214ENST00000591043 SIRT1Q96EB6 747 aa26.92■■□□□ 1.9
GCDH-214ENST00000591043 SHPRHQ149N8 1683 aa26.91■■□□□ 1.9
GCDH-214ENST00000591043 CFAP53Q96M91 514 aa26.91■■□□□ 1.9
GCDH-214ENST00000591043 SALL2Q9Y467 1007 aaPredicted RBP26.9■■□□□ 1.9
GCDH-214ENST00000591043 ZNF521Q96K83 1311 aa26.89■■□□□ 1.9
GCDH-214ENST00000591043 RRP1P56182 461 aaKnown RBP26.89■■□□□ 1.9
GCDH-214ENST00000591043 MINK1Q8N4C8 1332 aaPredicted RBP26.89■■□□□ 1.89
GCDH-214ENST00000591043 SAFB2Q14151 953 aaKnown RBP eCLIP26.89■■□□□ 1.89
GCDH-214ENST00000591043 TECPR2O15040 1411 aa26.88■■□□□ 1.89
GCDH-214ENST00000591043 FAM135BQ49AJ0 1406 aa26.88■■□□□ 1.89
GCDH-214ENST00000591043 A0A1W2PP64 1363 aa26.88■■□□□ 1.89
GCDH-214ENST00000591043 TMEM2Q9UHN6 1383 aa26.88■■□□□ 1.89
GCDH-214ENST00000591043 ATP7BP35670 1465 aa26.87■■□□□ 1.89
GCDH-214ENST00000591043 HDGFL2Q7Z4V5 671 aaPredicted RBP26.86■■□□□ 1.89
GCDH-214ENST00000591043 CPS1P31327 1500 aa26.86■■□□□ 1.89
GCDH-214ENST00000591043 GOLGA2Q08379 1002 aa26.86■■□□□ 1.89
GCDH-214ENST00000591043 KIF20BQ96Q89 1820 aa26.85■■□□□ 1.89
GCDH-214ENST00000591043 SENP3-EIF4A1A0A087X0R7 540 aa26.85■■□□□ 1.89
GCDH-214ENST00000591043 PLEKHH1Q9ULM0 1364 aa26.85■■□□□ 1.89
GCDH-214ENST00000591043 CDK19Q9BWU1 502 aa26.84■■□□□ 1.89
GCDH-214ENST00000591043 CDCA7LQ96GN5 454 aa26.84■■□□□ 1.89
GCDH-214ENST00000591043 FER1L4A9Z1Z3 1794 aa26.84■■□□□ 1.89
GCDH-214ENST00000591043 CD163L1Q9NR16 1453 aa26.83■■□□□ 1.89
GCDH-214ENST00000591043 C3P01024 1663 aa26.82■■□□□ 1.88
GCDH-214ENST00000591043 NCBP3Q53F19 620 aaKnown RBP26.82■■□□□ 1.88
GCDH-214ENST00000591043 PLEKHG1Q9ULL1 1385 aa26.79■■□□□ 1.88
GCDH-214ENST00000591043 MTHFSP49914 203 aa26.77■■□□□ 1.88
GCDH-214ENST00000591043 METP08581 1390 aa26.77■■□□□ 1.88
GCDH-214ENST00000591043 DUSP27Q5VZP5 1158 aa26.76■■□□□ 1.88
GCDH-214ENST00000591043 B4GALNT3Q6L9W6 998 aa26.76■■□□□ 1.88
GCDH-214ENST00000591043 APAF1O14727 1248 aa26.76■■□□□ 1.87
GCDH-214ENST00000591043 SLFN5Q08AF3 891 aa26.76■■□□□ 1.87
GCDH-214ENST00000591043 RUNDC1Q96C34 613 aa26.76■■□□□ 1.87
GCDH-214ENST00000591043 CCDC136Q96JN2 1154 aa26.76■■□□□ 1.87
GCDH-214ENST00000591043 SLIT1O75093 1534 aa26.75■■□□□ 1.87
GCDH-214ENST00000591043 TRMT2AQ8IZ69 625 aaKnown RBP26.75■■□□□ 1.87
GCDH-214ENST00000591043 E9PSI1 815 aa26.74■■□□□ 1.87
GCDH-214ENST00000591043 CCDC146Q8IYE0 955 aa26.74■■□□□ 1.87
GCDH-214ENST00000591043 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
GCDH-214ENST00000591043 ADGRB2O60241 1585 aa26.73■■□□□ 1.87
GCDH-214ENST00000591043 WASLO00401 505 aaPredicted RBP26.72■■□□□ 1.87
GCDH-214ENST00000591043 IQSEC2Q5JU85 1478 aa26.72■■□□□ 1.87
GCDH-214ENST00000591043 TNNT2P45379 298 aaPredicted RBP26.71■■□□□ 1.87
GCDH-214ENST00000591043 WAPLQ7Z5K2 1190 aa26.71■■□□□ 1.87
GCDH-214ENST00000591043 NKTRP30414 1462 aaKnown RBP26.71■■□□□ 1.87
GCDH-214ENST00000591043 ARHGAP23Q9P227 1491 aa26.71■■□□□ 1.87
GCDH-214ENST00000591043 ADAMTS13Q76LX8 1427 aa26.71■■□□□ 1.87
GCDH-214ENST00000591043 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.71■■□□□ 1.87
GCDH-214ENST00000591043 FYB1O15117 783 aa26.7■■□□□ 1.86
GCDH-214ENST00000591043 CABP1Q9NZU7 370 aa26.7■■□□□ 1.86
GCDH-214ENST00000591043 EID1Q9Y6B2 187 aa26.7■■□□□ 1.86
GCDH-214ENST00000591043 DIP2AQ14689 1571 aa26.7■■□□□ 1.86
GCDH-214ENST00000591043 EDC4Q6P2E9 1401 aaKnown RBP26.68■■□□□ 1.86
GCDH-214ENST00000591043 CDC42BPGQ6DT37 1551 aa26.68■■□□□ 1.86
GCDH-214ENST00000591043 CPSF1Q10570 1443 aaKnown RBP26.68■■□□□ 1.86
GCDH-214ENST00000591043 CCDC27Q2M243 656 aa26.68■■□□□ 1.86
GCDH-214ENST00000591043 ITSN1Q15811 1721 aa26.67■■□□□ 1.86
GCDH-214ENST00000591043 MON2Q7Z3U7 1717 aa26.67■■□□□ 1.86
GCDH-214ENST00000591043 AKAP12Q02952 1782 aa26.67■■□□□ 1.86
GCDH-214ENST00000591043 COL3A1P02461 1466 aaPredicted RBP26.66■■□□□ 1.86
GCDH-214ENST00000591043 PPIP5K1Q6PFW1 1433 aa26.65■■□□□ 1.86
GCDH-214ENST00000591043 GGNBP2Q9H3C7 697 aa26.65■■□□□ 1.86
GCDH-214ENST00000591043 PNNQ9H307 717 aaKnown RBP26.64■■□□□ 1.86
GCDH-214ENST00000591043 TXNDC2Q86VQ3 553 aa26.63■■□□□ 1.85
GCDH-214ENST00000591043 WDR63Q8IWG1 891 aa26.63■■□□□ 1.85
GCDH-214ENST00000591043 ADAMTSL3P82987 1691 aa26.63■■□□□ 1.85
GCDH-214ENST00000591043 WWC1Q8IX03 1113 aa26.62■■□□□ 1.85
GCDH-214ENST00000591043 THEMISQ8N1K5 641 aaPredicted RBP26.62■■□□□ 1.85
GCDH-214ENST00000591043 PHF23Q9BUL5 403 aaPredicted RBP26.62■■□□□ 1.85
GCDH-214ENST00000591043 CCDC61Q9Y6R9 512 aa26.62■■□□□ 1.85
GCDH-214ENST00000591043 PNPLA6Q8IY17 1366 aa26.62■■□□□ 1.85
GCDH-214ENST00000591043 TCP11L2Q8N4U5 519 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms