RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 FAM135AQ9P2D6 1515 aa21.2■□□□□ 0.99
SMARCA4-215ENST00000590574 SCAF11Q99590 1463 aaKnown RBP21.2■□□□□ 0.98
SMARCA4-215ENST00000590574 GOLGA6L4A6NEF3 574 aa21.19■□□□□ 0.98
SMARCA4-215ENST00000590574 PRAM1Q96QH2 718 aa21.19■□□□□ 0.98
SMARCA4-215ENST00000590574 ZRSR1Q15695 479 aaKnown RBP21.18■□□□□ 0.98
SMARCA4-215ENST00000590574 PRKAR2BP31323 418 aa21.18■□□□□ 0.98
SMARCA4-215ENST00000590574 ADGRF5Q8IZF2 1346 aa21.18■□□□□ 0.98
SMARCA4-215ENST00000590574 LRPPRCP42704 1394 aaKnown RBP21.17■□□□□ 0.98
SMARCA4-215ENST00000590574 SYAP1Q96A49 352 aaPredicted RBP21.17■□□□□ 0.98
SMARCA4-215ENST00000590574 LTV1Q96GA3 475 aaPredicted RBP21.17■□□□□ 0.98
SMARCA4-215ENST00000590574 DISP1Q96F81 1524 aa21.16■□□□□ 0.98
SMARCA4-215ENST00000590574 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
SMARCA4-215ENST00000590574 RILPL2Q969X0 211 aa21.16■□□□□ 0.98
SMARCA4-215ENST00000590574 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
SMARCA4-215ENST00000590574 KDM6BO15054 1643 aa21.16■□□□□ 0.98
SMARCA4-215ENST00000590574 RARSP54136 660 aaKnown RBP21.15■□□□□ 0.98
SMARCA4-215ENST00000590574 C1orf115Q9H7X2 142 aa21.15■□□□□ 0.98
SMARCA4-215ENST00000590574 NAP1L2Q9ULW6 460 aaPredicted RBP21.15■□□□□ 0.98
SMARCA4-215ENST00000590574 PBRM1Q86U86 1689 aa21.15■□□□□ 0.98
SMARCA4-215ENST00000590574 ATF7IPQ6VMQ6 1270 aa21.14■□□□□ 0.98
SMARCA4-215ENST00000590574 CT47B1P0C2W7 299 aaPredicted RBP21.14■□□□□ 0.97
SMARCA4-215ENST00000590574 TESK2Q96S53 571 aa21.14■□□□□ 0.97
SMARCA4-215ENST00000590574 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.97
SMARCA4-215ENST00000590574 UHRF1BP1Q6BDS2 1440 aa21.14■□□□□ 0.97
SMARCA4-215ENST00000590574 SHANK2Q9UPX8 1470 aa21.12■□□□□ 0.97
SMARCA4-215ENST00000590574 TRAK2O60296 914 aa21.12■□□□□ 0.97
SMARCA4-215ENST00000590574 EID1Q9Y6B2 187 aa21.12■□□□□ 0.97
SMARCA4-215ENST00000590574 AMER1Q5JTC6 1135 aaPredicted RBP21.12■□□□□ 0.97
SMARCA4-215ENST00000590574 RPGRIP1LQ68CZ1 1315 aa21.11■□□□□ 0.97
SMARCA4-215ENST00000590574 SPATA31E1Q6ZUB1 1445 aa21.11■□□□□ 0.97
SMARCA4-215ENST00000590574 CDC45O75419 566 aa21.11■□□□□ 0.97
SMARCA4-215ENST00000590574 REC8O95072 547 aa21.11■□□□□ 0.97
SMARCA4-215ENST00000590574 A0A0G2JS52 829 aa21.11■□□□□ 0.97
SMARCA4-215ENST00000590574 TAOK2Q9UL54 1235 aa21.11■□□□□ 0.97
SMARCA4-215ENST00000590574 CABP1Q9NZU7 370 aa21.1■□□□□ 0.97
SMARCA4-215ENST00000590574 PER1O15534 1290 aaPredicted RBP21.1■□□□□ 0.97
SMARCA4-215ENST00000590574 INTS3Q68E01 1043 aaKnown RBP21.1■□□□□ 0.97
SMARCA4-215ENST00000590574 CDK19Q9BWU1 502 aa21.1■□□□□ 0.97
SMARCA4-215ENST00000590574 ADGRL2O95490 1459 aa21.1■□□□□ 0.97
SMARCA4-215ENST00000590574 IGHDP01880 384 aa21.09■□□□□ 0.97
SMARCA4-215ENST00000590574 NUP160Q12769 1436 aa21.08■□□□□ 0.97
SMARCA4-215ENST00000590574 NECTIN2Q92692 538 aa21.08■□□□□ 0.97
SMARCA4-215ENST00000590574 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.96
SMARCA4-215ENST00000590574 FOXD4L6Q3SYB3 417 aaPredicted RBP21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 FOXD4L3Q6VB84 417 aaPredicted RBP21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 TWISTNBQ3B726 338 aaPredicted RBP21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 CYB5RLQ6IPT4 315 aa21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 KIAA2012Q0VF49 1180 aa21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 DRC7Q8IY82 874 aa21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 ASXL1Q8IXJ9 1541 aa21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 DUOX2Q9NRD8 1548 aa21.07■□□□□ 0.96
SMARCA4-215ENST00000590574 CHAF1AQ13111 956 aaPredicted RBP21.06■□□□□ 0.96
SMARCA4-215ENST00000590574 GCC1Q96CN9 775 aa21.06■□□□□ 0.96
SMARCA4-215ENST00000590574 RNF123Q5XPI4 1314 aa21.06■□□□□ 0.96
SMARCA4-215ENST00000590574 GPATCH3Q96I76 525 aa21.06■□□□□ 0.96
SMARCA4-215ENST00000590574 MRE11P49959 708 aa21.06■□□□□ 0.96
SMARCA4-215ENST00000590574 CHMP4AQ9BY43 222 aa21.06■□□□□ 0.96
SMARCA4-215ENST00000590574 MCTP1Q6DN14 999 aa21.05■□□□□ 0.96
SMARCA4-215ENST00000590574 TMEM57Q8N5G2 664 aa21.05■□□□□ 0.96
SMARCA4-215ENST00000590574 ADGRL1O94910 1474 aa21.04■□□□□ 0.96
SMARCA4-215ENST00000590574 RAPGEF3O95398 923 aa21.04■□□□□ 0.96
SMARCA4-215ENST00000590574 PLEKHH1Q9ULM0 1364 aa21.04■□□□□ 0.96
SMARCA4-215ENST00000590574 TSPYL4Q9UJ04 414 aa21.04■□□□□ 0.96
SMARCA4-215ENST00000590574 CHD1LQ86WJ1 897 aa21.04■□□□□ 0.96
SMARCA4-215ENST00000590574 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.03■□□□□ 0.96
SMARCA4-215ENST00000590574 EIF2AK4Q9P2K8 1649 aaKnown RBP21.03■□□□□ 0.96
SMARCA4-215ENST00000590574 NOS1P29475 1434 aa21.03■□□□□ 0.96
SMARCA4-215ENST00000590574 COL17A1Q9UMD9 1497 aaPredicted RBP21.02■□□□□ 0.96
SMARCA4-215ENST00000590574 NUCB2P80303 420 aa21.02■□□□□ 0.96
SMARCA4-215ENST00000590574 GPRASP1Q5JY77 1395 aa21.02■□□□□ 0.96
SMARCA4-215ENST00000590574 FKBP5Q13451 457 aaPredicted RBP21.02■□□□□ 0.96
SMARCA4-215ENST00000590574 SLC52A1Q9NWF4 448 aa21.02■□□□□ 0.95
SMARCA4-215ENST00000590574 PHF14O94880 888 aa21.01■□□□□ 0.95
SMARCA4-215ENST00000590574 SSH1Q8WYL5 1049 aa21.01■□□□□ 0.95
SMARCA4-215ENST00000590574 ARID3AQ99856 593 aa21.01■□□□□ 0.95
SMARCA4-215ENST00000590574 EIF4G3O43432 1585 aaKnown RBP21.01■□□□□ 0.95
SMARCA4-215ENST00000590574 ATAD2Q6PL18 1390 aa21.01■□□□□ 0.95
SMARCA4-215ENST00000590574 ANO8Q9HCE9 1232 aaPredicted RBP21.01■□□□□ 0.95
SMARCA4-215ENST00000590574 ANO2Q9NQ90 1003 aa21■□□□□ 0.95
SMARCA4-215ENST00000590574 GOLGA6L6A8MZA4 724 aa21■□□□□ 0.95
SMARCA4-215ENST00000590574 C8orf34Q49A92 452 aa20.99■□□□□ 0.95
SMARCA4-215ENST00000590574 FAM69CQ0P6D2 419 aa20.99■□□□□ 0.95
SMARCA4-215ENST00000590574 PLCH2O75038 1416 aa20.99■□□□□ 0.95
SMARCA4-215ENST00000590574 A2MP01023 1474 aa20.99■□□□□ 0.95
SMARCA4-215ENST00000590574 EIF2S2P20042 333 aaKnown RBP20.99■□□□□ 0.95
SMARCA4-215ENST00000590574 FCHSD2O94868 740 aa20.98■□□□□ 0.95
SMARCA4-215ENST00000590574 FAM43AQ8N2R8 423 aa20.98■□□□□ 0.95
SMARCA4-215ENST00000590574 MCM4P33991 863 aa20.98■□□□□ 0.95
SMARCA4-215ENST00000590574 HSP90AA2PQ14568 343 aaPredicted RBP20.98■□□□□ 0.95
SMARCA4-215ENST00000590574 HDAC5Q9UQL6 1122 aa20.98■□□□□ 0.95
SMARCA4-215ENST00000590574 ADGBQ8N7X0 1667 aa20.97■□□□□ 0.95
SMARCA4-215ENST00000590574 CSPP1Q1MSJ5 1256 aa20.97■□□□□ 0.95
SMARCA4-215ENST00000590574 TXNDC2Q86VQ3 553 aa20.96■□□□□ 0.95
SMARCA4-215ENST00000590574 FANCAO15360 1455 aa20.96■□□□□ 0.95
SMARCA4-215ENST00000590574 TARBP1Q13395 1621 aaKnown RBP20.96■□□□□ 0.95
SMARCA4-215ENST00000590574 C14orf93Q9H972 538 aaKnown RBP20.95■□□□□ 0.94
SMARCA4-215ENST00000590574 TBC1D2Q9BYX2 928 aa20.95■□□□□ 0.94
SMARCA4-215ENST00000590574 THUMPD2Q9BTF0 503 aaKnown RBP20.95■□□□□ 0.94
SMARCA4-215ENST00000590574 TRIM27P14373 513 aa20.94■□□□□ 0.94
SMARCA4-215ENST00000590574 TRAPPC8Q9Y2L5 1435 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms