RNA–Protein interactions for RNA: ENST00000590116.5

ZNF554-203, Transcript of zinc finger protein 554, humanhuman

TSL 2

Gene ZNF554, Length 2,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-203ENST00000590116 C14orf93Q9H972 538 aaKnown RBP27.08■■□□□ 1.93
ZNF554-203ENST00000590116 ADGRB1O14514 1584 aa27.07■■□□□ 1.92
ZNF554-203ENST00000590116 FAM161AQ3B820 660 aa27.06■■□□□ 1.92
ZNF554-203ENST00000590116 POGZQ7Z3K3 1410 aa27.05■■□□□ 1.92
ZNF554-203ENST00000590116 PANK1Q8TE04 598 aa27.04■■□□□ 1.92
ZNF554-203ENST00000590116 IGHDP01880 384 aa27.04■■□□□ 1.92
ZNF554-203ENST00000590116 NPM1P06748 294 aaKnown RBP eCLIP27.02■■□□□ 1.92
ZNF554-203ENST00000590116 CANXP27824 592 aaKnown RBP27.02■■□□□ 1.92
ZNF554-203ENST00000590116 CD109Q6YHK3 1445 aa27.02■■□□□ 1.92
ZNF554-203ENST00000590116 COG6Q9Y2V7 657 aa27.01■■□□□ 1.92
ZNF554-203ENST00000590116 HECW2Q9P2P5 1572 aa27.01■■□□□ 1.91
ZNF554-203ENST00000590116 FRAT1Q92837 279 aaPredicted RBP27■■□□□ 1.91
ZNF554-203ENST00000590116 SIGLEC1Q9BZZ2 1709 aa26.99■■□□□ 1.91
ZNF554-203ENST00000590116 ABCC3O15438 1527 aa26.99■■□□□ 1.91
ZNF554-203ENST00000590116 PPM1GO15355 546 aaPredicted RBP26.99■■□□□ 1.91
ZNF554-203ENST00000590116 MTHFSP49914 203 aa26.99■■□□□ 1.91
ZNF554-203ENST00000590116 TCP11L2Q8N4U5 519 aa26.99■■□□□ 1.91
ZNF554-203ENST00000590116 MLH3Q9UHC1 1453 aa26.99■■□□□ 1.91
ZNF554-203ENST00000590116 SAFB2Q14151 953 aaKnown RBP eCLIP26.98■■□□□ 1.91
ZNF554-203ENST00000590116 RUNDC1Q96C34 613 aa26.98■■□□□ 1.91
ZNF554-203ENST00000590116 GLI2P10070 1586 aa26.97■■□□□ 1.91
ZNF554-203ENST00000590116 PDE3AQ14432 1141 aa26.97■■□□□ 1.91
ZNF554-203ENST00000590116 IQSEC2Q5JU85 1478 aa26.97■■□□□ 1.91
ZNF554-203ENST00000590116 USP35Q9P2H5 1018 aa26.96■■□□□ 1.91
ZNF554-203ENST00000590116 TNNQ9UQP3 1299 aa26.96■■□□□ 1.91
ZNF554-203ENST00000590116 CGNL1Q0VF96 1302 aa26.96■■□□□ 1.91
ZNF554-203ENST00000590116 RPGRIP1LQ68CZ1 1315 aa26.96■■□□□ 1.91
ZNF554-203ENST00000590116 RAPGEF3O95398 923 aa26.96■■□□□ 1.91
ZNF554-203ENST00000590116 BCL2L13Q9BXK5 485 aa26.96■■□□□ 1.91
ZNF554-203ENST00000590116 CFAP74Q9C0B2 1584 aa26.95■■□□□ 1.91
ZNF554-203ENST00000590116 CAMSAP1Q5T5Y3 1602 aa26.94■■□□□ 1.9
ZNF554-203ENST00000590116 TULP4Q9NRJ4 1543 aa26.94■■□□□ 1.9
ZNF554-203ENST00000590116 CABP2Q9NPB3 220 aa26.94■■□□□ 1.9
ZNF554-203ENST00000590116 CLUAP1Q96AJ1 413 aa26.93■■□□□ 1.9
ZNF554-203ENST00000590116 ARHGEF28Q8N1W1 1705 aaKnown RBP26.92■■□□□ 1.9
ZNF554-203ENST00000590116 NINLQ9Y2I6 1382 aa26.92■■□□□ 1.9
ZNF554-203ENST00000590116 DAXXQ9UER7 740 aaPredicted RBP26.92■■□□□ 1.9
ZNF554-203ENST00000590116 USP32Q8NFA0 1604 aa26.91■■□□□ 1.9
ZNF554-203ENST00000590116 RARSP54136 660 aaKnown RBP26.91■■□□□ 1.9
ZNF554-203ENST00000590116 CFAP53Q96M91 514 aa26.9■■□□□ 1.9
ZNF554-203ENST00000590116 EVC2Q86UK5 1308 aa26.9■■□□□ 1.9
ZNF554-203ENST00000590116 RLBP1P12271 317 aa26.89■■□□□ 1.9
ZNF554-203ENST00000590116 NEXMIFQ5QGS0 1516 aa26.88■■□□□ 1.89
ZNF554-203ENST00000590116 PHF23Q9BUL5 403 aaPredicted RBP26.88■■□□□ 1.89
ZNF554-203ENST00000590116 STK26Q9P289 416 aa26.88■■□□□ 1.89
ZNF554-203ENST00000590116 VGFO15240 615 aaPredicted RBP26.87■■□□□ 1.89
ZNF554-203ENST00000590116 U2AF1L5P0DN76 240 aaPredicted RBP26.86■■□□□ 1.89
ZNF554-203ENST00000590116 U2AF1Q01081 240 aaKnown RBP eCLIP26.86■■□□□ 1.89
ZNF554-203ENST00000590116 ANKRD36BQ8N2N9 1353 aa26.86■■□□□ 1.89
ZNF554-203ENST00000590116 WDR63Q8IWG1 891 aa26.85■■□□□ 1.89
ZNF554-203ENST00000590116 PIK3C2BO00750 1634 aa26.85■■□□□ 1.89
ZNF554-203ENST00000590116 VIRMAQ69YN4 1812 aaKnown RBP26.84■■□□□ 1.89
ZNF554-203ENST00000590116 NFKBIBQ15653 356 aa26.83■■□□□ 1.89
ZNF554-203ENST00000590116 SEC24BO95487 1268 aa26.82■■□□□ 1.88
ZNF554-203ENST00000590116 IDI1Q13907 227 aa26.81■■□□□ 1.88
ZNF554-203ENST00000590116 PUS7Q96PZ0 661 aaKnown RBP26.81■■□□□ 1.88
ZNF554-203ENST00000590116 PCDHB15Q9Y5E8 787 aa26.81■■□□□ 1.88
ZNF554-203ENST00000590116 CCDC27Q2M243 656 aa26.8■■□□□ 1.88
ZNF554-203ENST00000590116 NSD2O96028 1365 aa26.8■■□□□ 1.88
ZNF554-203ENST00000590116 DIP2CQ9Y2E4 1556 aa26.8■■□□□ 1.88
ZNF554-203ENST00000590116 A0A1W2PP64 1363 aa26.79■■□□□ 1.88
ZNF554-203ENST00000590116 GGNBP2Q9H3C7 697 aa26.79■■□□□ 1.88
ZNF554-203ENST00000590116 MYO5BQ9ULV0 1848 aa26.79■■□□□ 1.88
ZNF554-203ENST00000590116 MAPK8IP3Q9UPT6 1336 aa26.79■■□□□ 1.88
ZNF554-203ENST00000590116 SRPK2P78362 688 aaKnown RBP26.79■■□□□ 1.88
ZNF554-203ENST00000590116 USP19O94966 1318 aa26.78■■□□□ 1.88
ZNF554-203ENST00000590116 OSCARQ8IYS5 282 aa26.78■■□□□ 1.88
ZNF554-203ENST00000590116 TSR2Q969E8 191 aaKnown RBP26.78■■□□□ 1.88
ZNF554-203ENST00000590116 U2SURPO15042 1029 aaKnown RBP26.76■■□□□ 1.87
ZNF554-203ENST00000590116 MYH16Q9H6N6 1097 aa26.76■■□□□ 1.87
ZNF554-203ENST00000590116 MINK1Q8N4C8 1332 aaPredicted RBP26.75■■□□□ 1.87
ZNF554-203ENST00000590116 PMFBP1Q8TBY8 1022 aa26.74■■□□□ 1.87
ZNF554-203ENST00000590116 NEO1Q92859 1461 aa26.74■■□□□ 1.87
ZNF554-203ENST00000590116 YEATS2Q9ULM3 1422 aa26.73■■□□□ 1.87
ZNF554-203ENST00000590116 ADGRB2O60241 1585 aa26.73■■□□□ 1.87
ZNF554-203ENST00000590116 AAMPQ13685 434 aa26.72■■□□□ 1.87
ZNF554-203ENST00000590116 IL27Q8NEV9 243 aa26.72■■□□□ 1.87
ZNF554-203ENST00000590116 ABCC11Q96J66 1382 aa26.71■■□□□ 1.87
ZNF554-203ENST00000590116 ARHGAP31Q2M1Z3 1444 aa26.71■■□□□ 1.87
ZNF554-203ENST00000590116 PDZRN3Q9UPQ7 1066 aa26.7■■□□□ 1.86
ZNF554-203ENST00000590116 PRAM1Q96QH2 718 aa26.7■■□□□ 1.86
ZNF554-203ENST00000590116 NCBP3Q53F19 620 aaKnown RBP26.68■■□□□ 1.86
ZNF554-203ENST00000590116 SLC52A1Q9NWF4 448 aa26.68■■□□□ 1.86
ZNF554-203ENST00000590116 FRAT2O75474 233 aaPredicted RBP26.67■■□□□ 1.86
ZNF554-203ENST00000590116 PTPRMP28827 1452 aa26.67■■□□□ 1.86
ZNF554-203ENST00000590116 RICTORQ6R327 1708 aa26.67■■□□□ 1.86
ZNF554-203ENST00000590116 EXOSC9Q06265 439 aaKnown RBP26.67■■□□□ 1.86
ZNF554-203ENST00000590116 ZFYVE9O95405 1425 aa26.67■■□□□ 1.86
ZNF554-203ENST00000590116 NLRP1Q9C000 1473 aa26.67■■□□□ 1.86
ZNF554-203ENST00000590116 PLEKHF1Q96S99 279 aa26.66■■□□□ 1.86
ZNF554-203ENST00000590116 COL3A1P02461 1466 aaPredicted RBP26.66■■□□□ 1.86
ZNF554-203ENST00000590116 MVPQ14764 893 aaKnown RBP26.65■■□□□ 1.86
ZNF554-203ENST00000590116 FTSJ3Q8IY81 847 aaKnown RBP26.65■■□□□ 1.86
ZNF554-203ENST00000590116 FYB1O15117 783 aa26.65■■□□□ 1.86
ZNF554-203ENST00000590116 TMPOP42166 694 aaKnown RBP26.65■■□□□ 1.86
ZNF554-203ENST00000590116 TRIM35Q9UPQ4 493 aa26.65■■□□□ 1.86
ZNF554-203ENST00000590116 FBXO31Q5XUX0 539 aaPredicted RBP26.64■■□□□ 1.86
ZNF554-203ENST00000590116 SMC4Q9NTJ3 1288 aa26.64■■□□□ 1.86
ZNF554-203ENST00000590116 POGKQ9P215 609 aa26.64■■□□□ 1.86
ZNF554-203ENST00000590116 GSE1Q14687 1217 aa26.64■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms