RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 PLEKHH1Q9ULM0 1364 aa26.76■■□□□ 1.87
H3F3B-209ENST00000589949 SOS2Q07890 1332 aaPredicted RBP26.75■■□□□ 1.87
H3F3B-209ENST00000589949 ABCC11Q96J66 1382 aa26.74■■□□□ 1.87
H3F3B-209ENST00000589949 ZNF772Q68DY9 489 aaPredicted RBP26.74■■□□□ 1.87
H3F3B-209ENST00000589949 CDC42BPGQ6DT37 1551 aa26.73■■□□□ 1.87
H3F3B-209ENST00000589949 AFF2P51816 1311 aa26.71■■□□□ 1.87
H3F3B-209ENST00000589949 NRXN1Q9ULB1 1477 aa26.71■■□□□ 1.87
H3F3B-209ENST00000589949 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
H3F3B-209ENST00000589949 YTHDC2Q9H6S0 1430 aaKnown RBP26.69■■□□□ 1.86
H3F3B-209ENST00000589949 C14orf93Q9H972 538 aaKnown RBP26.69■■□□□ 1.86
H3F3B-209ENST00000589949 KNDC1Q76NI1 1749 aa26.68■■□□□ 1.86
H3F3B-209ENST00000589949 CFAP70Q5T0N1 1121 aa26.68■■□□□ 1.86
H3F3B-209ENST00000589949 NUTM2FA1L443 756 aa26.67■■□□□ 1.86
H3F3B-209ENST00000589949 ESCO1Q5FWF5 840 aa26.67■■□□□ 1.86
H3F3B-209ENST00000589949 C8orf37Q96NL8 207 aa26.67■■□□□ 1.86
H3F3B-209ENST00000589949 MYOM2P54296 1465 aa26.66■■□□□ 1.86
H3F3B-209ENST00000589949 ADAMTS2O95450 1211 aa26.64■■□□□ 1.86
H3F3B-209ENST00000589949 PXDNQ92626 1479 aa26.63■■□□□ 1.85
H3F3B-209ENST00000589949 XPCQ01831 940 aaPredicted RBP26.63■■□□□ 1.85
H3F3B-209ENST00000589949 FOXO3O43524 673 aa26.62■■□□□ 1.85
H3F3B-209ENST00000589949 RXRBP28702 533 aa26.62■■□□□ 1.85
H3F3B-209ENST00000589949 SIRT1Q96EB6 747 aa26.6■■□□□ 1.85
H3F3B-209ENST00000589949 NPHP3Q7Z494 1330 aa26.6■■□□□ 1.85
H3F3B-209ENST00000589949 FMN2Q9NZ56 1722 aa26.59■■□□□ 1.85
H3F3B-209ENST00000589949 COL22A1Q8NFW1 1626 aaPredicted RBP26.58■■□□□ 1.85
H3F3B-209ENST00000589949 NGLY1Q96IV0 654 aa26.57■■□□□ 1.84
H3F3B-209ENST00000589949 QTRT2Q9H974 415 aaKnown RBP26.57■■□□□ 1.84
H3F3B-209ENST00000589949 DHX57Q6P158 1386 aaKnown RBP26.56■■□□□ 1.84
H3F3B-209ENST00000589949 CDK12Q9NYV4 1490 aaPredicted RBP26.55■■□□□ 1.84
H3F3B-209ENST00000589949 PRAM1Q96QH2 718 aa26.55■■□□□ 1.84
H3F3B-209ENST00000589949 ADGRB1O14514 1584 aa26.54■■□□□ 1.84
H3F3B-209ENST00000589949 SAFB2Q14151 953 aaKnown RBP eCLIP26.54■■□□□ 1.84
H3F3B-209ENST00000589949 UPF1Q92900 1129 aaKnown RBP eCLIP26.54■■□□□ 1.84
H3F3B-209ENST00000589949 HRCP23327 699 aa26.53■■□□□ 1.84
H3F3B-209ENST00000589949 RGS12O14924 1447 aa26.52■■□□□ 1.84
H3F3B-209ENST00000589949 KDM2AQ9Y2K7 1162 aa26.51■■□□□ 1.83
H3F3B-209ENST00000589949 RGPD8O14715 1765 aaPredicted RBP26.51■■□□□ 1.83
H3F3B-209ENST00000589949 RBM6P78332 1123 aaKnown RBP26.5■■□□□ 1.83
H3F3B-209ENST00000589949 FNBP4Q8N3X1 1017 aaPredicted RBP26.5■■□□□ 1.83
H3F3B-209ENST00000589949 DCAF11Q8TEB1 546 aa26.49■■□□□ 1.83
H3F3B-209ENST00000589949 DLC1Q96QB1 1528 aa26.49■■□□□ 1.83
H3F3B-209ENST00000589949 USP21Q9UK80 565 aa26.48■■□□□ 1.83
H3F3B-209ENST00000589949 SPATA31A3Q5VYP0 1347 aa26.47■■□□□ 1.83
H3F3B-209ENST00000589949 KRT28Q7Z3Y7 464 aa26.46■■□□□ 1.83
H3F3B-209ENST00000589949 TRAK1Q9UPV9 953 aa26.46■■□□□ 1.83
H3F3B-209ENST00000589949 KIF1AQ12756 1690 aa26.46■■□□□ 1.83
H3F3B-209ENST00000589949 PHF8Q9UPP1 1060 aa26.45■■□□□ 1.82
H3F3B-209ENST00000589949 USP32Q8NFA0 1604 aa26.44■■□□□ 1.82
H3F3B-209ENST00000589949 BCL9LQ86UU0 1499 aa26.43■■□□□ 1.82
H3F3B-209ENST00000589949 ATRNO75882 1429 aa26.43■■□□□ 1.82
H3F3B-209ENST00000589949 POGKQ9P215 609 aa26.43■■□□□ 1.82
H3F3B-209ENST00000589949 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
H3F3B-209ENST00000589949 MARF1Q9Y4F3 1742 aaKnown RBP26.41■■□□□ 1.82
H3F3B-209ENST00000589949 TRPC5Q9UL62 973 aaPredicted RBP26.4■■□□□ 1.82
H3F3B-209ENST00000589949 ADGRB2O60241 1585 aa26.4■■□□□ 1.82
H3F3B-209ENST00000589949 MINK1Q8N4C8 1332 aaPredicted RBP26.38■■□□□ 1.81
H3F3B-209ENST00000589949 PRR36Q9H6K5 1346 aa26.38■■□□□ 1.81
H3F3B-209ENST00000589949 PMFBP1Q8TBY8 1022 aa26.37■■□□□ 1.81
H3F3B-209ENST00000589949 TNS3Q68CZ2 1445 aa26.37■■□□□ 1.81
H3F3B-209ENST00000589949 CABLES1Q8TDN4 633 aa26.36■■□□□ 1.81
H3F3B-209ENST00000589949 ANKARQ7Z5J8 1434 aa26.36■■□□□ 1.81
H3F3B-209ENST00000589949 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
H3F3B-209ENST00000589949 SBNO1A3KN83 1393 aa26.33■■□□□ 1.81
H3F3B-209ENST00000589949 PLEKHG5O94827 1062 aa26.33■■□□□ 1.81
H3F3B-209ENST00000589949 PSME1Q06323 249 aa26.32■■□□□ 1.8
H3F3B-209ENST00000589949 SLIT2O94813 1529 aa26.32■■□□□ 1.8
H3F3B-209ENST00000589949 WASLO00401 505 aaPredicted RBP26.3■■□□□ 1.8
H3F3B-209ENST00000589949 ARHGEF28Q8N1W1 1705 aaKnown RBP26.29■■□□□ 1.8
H3F3B-209ENST00000589949 GJD4Q96KN9 370 aaPredicted RBP26.29■■□□□ 1.8
H3F3B-209ENST00000589949 TULP4Q9NRJ4 1543 aa26.29■■□□□ 1.8
H3F3B-209ENST00000589949 LMOD2Q6P5Q4 547 aa26.28■■□□□ 1.8
H3F3B-209ENST00000589949 TRPM3Q9HCF6 1732 aaPredicted RBP26.28■■□□□ 1.8
H3F3B-209ENST00000589949 UNC5CLQ8IV45 518 aa26.27■■□□□ 1.8
H3F3B-209ENST00000589949 ABCA3Q99758 1704 aa26.27■■□□□ 1.8
H3F3B-209ENST00000589949 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.27■■□□□ 1.8
H3F3B-209ENST00000589949 GLI3P10071 1580 aa26.25■■□□□ 1.79
H3F3B-209ENST00000589949 RALGAPBQ86X10 1494 aa26.24■■□□□ 1.79
H3F3B-209ENST00000589949 ARHGEF10O15013 1369 aa26.24■■□□□ 1.79
H3F3B-209ENST00000589949 NBPF1Q3BBV0 1214 aa26.24■■□□□ 1.79
H3F3B-209ENST00000589949 EP400Q96L91 3159 aa26.23■■□□□ 1.79
H3F3B-209ENST00000589949 ATAD2Q6PL18 1390 aa26.23■■□□□ 1.79
H3F3B-209ENST00000589949 HAP1P54257 671 aaPredicted RBP26.22■■□□□ 1.79
H3F3B-209ENST00000589949 ALS2Q96Q42 1657 aa26.22■■□□□ 1.79
H3F3B-209ENST00000589949 EIF3AQ14152 1382 aaKnown RBP26.21■■□□□ 1.79
H3F3B-209ENST00000589949 FAM83GA6ND36 823 aa26.21■■□□□ 1.79
H3F3B-209ENST00000589949 ATP7BP35670 1465 aa26.21■■□□□ 1.79
H3F3B-209ENST00000589949 PLCH1Q4KWH8 1693 aa26.19■■□□□ 1.78
H3F3B-209ENST00000589949 NUDT16Q96DE0 195 aaKnown RBP26.19■■□□□ 1.78
H3F3B-209ENST00000589949 KIAA1210Q9ULL0 1709 aa26.19■■□□□ 1.78
H3F3B-209ENST00000589949 GPRASP1Q5JY77 1395 aa26.19■■□□□ 1.78
H3F3B-209ENST00000589949 NGDNQ8NEJ9 315 aaKnown RBP26.17■■□□□ 1.78
H3F3B-209ENST00000589949 CDK19Q9BWU1 502 aa26.17■■□□□ 1.78
H3F3B-209ENST00000589949 VPS72Q15906 364 aa26.16■■□□□ 1.78
H3F3B-209ENST00000589949 NWD2Q9ULI1 1742 aa26.14■■□□□ 1.78
H3F3B-209ENST00000589949 CRYBG1Q9Y4K1 1723 aa26.13■■□□□ 1.77
H3F3B-209ENST00000589949 SIN3AQ96ST3 1273 aa26.12■■□□□ 1.77
H3F3B-209ENST00000589949 PAK3O75914 559 aaPredicted RBP26.11■■□□□ 1.77
H3F3B-209ENST00000589949 L3MBTL2Q969R5 705 aa26.11■■□□□ 1.77
H3F3B-209ENST00000589949 BRWD3Q6RI45 1802 aa26.11■■□□□ 1.77
H3F3B-209ENST00000589949 ONECUT3O60422 494 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms