RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 KNDC1Q76NI1 1749 aa31.16■■■□□ 2.58
TMC6-213ENST00000589933 C8orf37Q96NL8 207 aa31.16■■■□□ 2.58
TMC6-213ENST00000589933 SOS2Q07890 1332 aaPredicted RBP31.16■■■□□ 2.58
TMC6-213ENST00000589933 TECPR2O15040 1411 aa31.15■■■□□ 2.58
TMC6-213ENST00000589933 ESCO1Q5FWF5 840 aa31.14■■■□□ 2.58
TMC6-213ENST00000589933 NPHP3Q7Z494 1330 aa31.14■■■□□ 2.58
TMC6-213ENST00000589933 ABCC11Q96J66 1382 aa31.14■■■□□ 2.58
TMC6-213ENST00000589933 PIK3C2GO75747 1445 aa31.14■■■□□ 2.58
TMC6-213ENST00000589933 TMEM132EQ6IEE7 984 aa31.11■■■□□ 2.57
TMC6-213ENST00000589933 CDK12Q9NYV4 1490 aaPredicted RBP31.1■■■□□ 2.57
TMC6-213ENST00000589933 WAPLQ7Z5K2 1190 aa31.1■■■□□ 2.57
TMC6-213ENST00000589933 NGLY1Q96IV0 654 aa31.1■■■□□ 2.57
TMC6-213ENST00000589933 RAB3GAP2Q9H2M9 1393 aa31.08■■■□□ 2.57
TMC6-213ENST00000589933 ADAMTS2O95450 1211 aa31.08■■■□□ 2.57
TMC6-213ENST00000589933 YTHDC2Q9H6S0 1430 aaKnown RBP31.07■■■□□ 2.57
TMC6-213ENST00000589933 QTRT2Q9H974 415 aaKnown RBP31.07■■■□□ 2.56
TMC6-213ENST00000589933 DHX57Q6P158 1386 aaKnown RBP31.06■■■□□ 2.56
TMC6-213ENST00000589933 SIRT1Q96EB6 747 aa31.05■■■□□ 2.56
TMC6-213ENST00000589933 C14orf93Q9H972 538 aaKnown RBP31.05■■■□□ 2.56
TMC6-213ENST00000589933 MYOM2P54296 1465 aa31.04■■■□□ 2.56
TMC6-213ENST00000589933 RBM6P78332 1123 aaKnown RBP31.04■■■□□ 2.56
TMC6-213ENST00000589933 COL22A1Q8NFW1 1626 aaPredicted RBP31.02■■■□□ 2.56
TMC6-213ENST00000589933 NUTM2FA1L443 756 aa31.02■■■□□ 2.56
TMC6-213ENST00000589933 FOXO3O43524 673 aa31.02■■■□□ 2.56
TMC6-213ENST00000589933 FMN2Q9NZ56 1722 aa31.01■■■□□ 2.56
TMC6-213ENST00000589933 NRXN1Q9ULB1 1477 aa31■■■□□ 2.55
TMC6-213ENST00000589933 KIF1AQ12756 1690 aa31■■■□□ 2.55
TMC6-213ENST00000589933 PLEKHH1Q9ULM0 1364 aa30.99■■■□□ 2.55
TMC6-213ENST00000589933 CFAP70Q5T0N1 1121 aa30.98■■■□□ 2.55
TMC6-213ENST00000589933 PXDNQ92626 1479 aa30.97■■■□□ 2.55
TMC6-213ENST00000589933 UPF1Q92900 1129 aaKnown RBP eCLIP30.97■■■□□ 2.55
TMC6-213ENST00000589933 USP21Q9UK80 565 aa30.97■■■□□ 2.55
TMC6-213ENST00000589933 TRPC5Q9UL62 973 aaPredicted RBP30.95■■■□□ 2.55
TMC6-213ENST00000589933 MARF1Q9Y4F3 1742 aaKnown RBP30.95■■■□□ 2.54
TMC6-213ENST00000589933 XPCQ01831 940 aaPredicted RBP30.94■■■□□ 2.54
TMC6-213ENST00000589933 POGKQ9P215 609 aa30.92■■■□□ 2.54
TMC6-213ENST00000589933 RGPD8O14715 1765 aaPredicted RBP30.92■■■□□ 2.54
TMC6-213ENST00000589933 HRCP23327 699 aa30.91■■■□□ 2.54
TMC6-213ENST00000589933 FNBP4Q8N3X1 1017 aaPredicted RBP30.91■■■□□ 2.54
TMC6-213ENST00000589933 STAC3Q96MF2 364 aa30.9■■■□□ 2.54
TMC6-213ENST00000589933 PRAM1Q96QH2 718 aa30.89■■■□□ 2.54
TMC6-213ENST00000589933 RGS12O14924 1447 aa30.89■■■□□ 2.53
TMC6-213ENST00000589933 PSME1Q06323 249 aa30.88■■■□□ 2.53
TMC6-213ENST00000589933 DLC1Q96QB1 1528 aa30.88■■■□□ 2.53
TMC6-213ENST00000589933 SAFB2Q14151 953 aaKnown RBP eCLIP30.87■■■□□ 2.53
TMC6-213ENST00000589933 KRT28Q7Z3Y7 464 aa30.87■■■□□ 2.53
TMC6-213ENST00000589933 PHF8Q9UPP1 1060 aa30.86■■■□□ 2.53
TMC6-213ENST00000589933 SPATA31A3Q5VYP0 1347 aa30.85■■■□□ 2.53
TMC6-213ENST00000589933 DCAF11Q8TEB1 546 aa30.85■■■□□ 2.53
TMC6-213ENST00000589933 KDM2AQ9Y2K7 1162 aa30.85■■■□□ 2.53
TMC6-213ENST00000589933 HAP1P54257 671 aaPredicted RBP30.83■■■□□ 2.53
TMC6-213ENST00000589933 ATRNO75882 1429 aa30.81■■■□□ 2.52
TMC6-213ENST00000589933 TRAK1Q9UPV9 953 aa30.79■■■□□ 2.52
TMC6-213ENST00000589933 EIF3AQ14152 1382 aaKnown RBP30.79■■■□□ 2.52
TMC6-213ENST00000589933 ATAD2Q6PL18 1390 aa30.79■■■□□ 2.52
TMC6-213ENST00000589933 ANKARQ7Z5J8 1434 aa30.78■■■□□ 2.52
TMC6-213ENST00000589933 ADGRB1O14514 1584 aa30.78■■■□□ 2.52
TMC6-213ENST00000589933 ADGRB2O60241 1585 aa30.77■■■□□ 2.52
TMC6-213ENST00000589933 TNS3Q68CZ2 1445 aa30.77■■■□□ 2.52
TMC6-213ENST00000589933 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.76■■■□□ 2.52
TMC6-213ENST00000589933 LMOD2Q6P5Q4 547 aa30.75■■■□□ 2.51
TMC6-213ENST00000589933 SBNO1A3KN83 1393 aa30.75■■■□□ 2.51
TMC6-213ENST00000589933 BCL9LQ86UU0 1499 aa30.75■■■□□ 2.51
TMC6-213ENST00000589933 ARHGEF10O15013 1369 aa30.74■■■□□ 2.51
TMC6-213ENST00000589933 USP32Q8NFA0 1604 aa30.73■■■□□ 2.51
TMC6-213ENST00000589933 GJD4Q96KN9 370 aaPredicted RBP30.72■■■□□ 2.51
TMC6-213ENST00000589933 UNC5CLQ8IV45 518 aa30.71■■■□□ 2.51
TMC6-213ENST00000589933 MINK1Q8N4C8 1332 aaPredicted RBP30.71■■■□□ 2.51
TMC6-213ENST00000589933 PMFBP1Q8TBY8 1022 aa30.7■■■□□ 2.51
TMC6-213ENST00000589933 HIRIP3Q9BW71 556 aaPredicted RBP30.69■■■□□ 2.5
TMC6-213ENST00000589933 GPRASP1Q5JY77 1395 aa30.68■■■□□ 2.5
TMC6-213ENST00000589933 SLIT2O94813 1529 aa30.66■■■□□ 2.5
TMC6-213ENST00000589933 TULP4Q9NRJ4 1543 aa30.65■■■□□ 2.5
TMC6-213ENST00000589933 WASLO00401 505 aaPredicted RBP30.65■■■□□ 2.5
TMC6-213ENST00000589933 PLEKHG5O94827 1062 aa30.65■■■□□ 2.5
TMC6-213ENST00000589933 NWD2Q9ULI1 1742 aa30.64■■■□□ 2.5
TMC6-213ENST00000589933 ARHGEF28Q8N1W1 1705 aaKnown RBP30.63■■■□□ 2.49
TMC6-213ENST00000589933 ITSN1Q15811 1721 aa30.62■■■□□ 2.49
TMC6-213ENST00000589933 ABCA3Q99758 1704 aa30.62■■■□□ 2.49
TMC6-213ENST00000589933 CABLES1Q8TDN4 633 aa30.62■■■□□ 2.49
TMC6-213ENST00000589933 CCDC125Q86Z20 511 aa30.61■■■□□ 2.49
TMC6-213ENST00000589933 PLCH1Q4KWH8 1693 aa30.6■■■□□ 2.49
TMC6-213ENST00000589933 NGDNQ8NEJ9 315 aaKnown RBP30.6■■■□□ 2.49
TMC6-213ENST00000589933 RALGAPBQ86X10 1494 aa30.59■■■□□ 2.49
TMC6-213ENST00000589933 KIAA1210Q9ULL0 1709 aa30.59■■■□□ 2.49
TMC6-213ENST00000589933 CCDC9Q9Y3X0 531 aaKnown RBP30.58■■■□□ 2.49
TMC6-213ENST00000589933 TRPM3Q9HCF6 1732 aaPredicted RBP30.58■■■□□ 2.49
TMC6-213ENST00000589933 PRR36Q9H6K5 1346 aa30.55■■■□□ 2.48
TMC6-213ENST00000589933 GLI3P10071 1580 aa30.55■■■□□ 2.48
TMC6-213ENST00000589933 VPS72Q15906 364 aa30.55■■■□□ 2.48
TMC6-213ENST00000589933 ALS2Q96Q42 1657 aa30.54■■■□□ 2.48
TMC6-213ENST00000589933 PAK3O75914 559 aaPredicted RBP30.53■■■□□ 2.48
TMC6-213ENST00000589933 BRWD3Q6RI45 1802 aa30.5■■■□□ 2.47
TMC6-213ENST00000589933 NUDT16Q96DE0 195 aaKnown RBP30.5■■■□□ 2.47
TMC6-213ENST00000589933 FAM83GA6ND36 823 aa30.49■■■□□ 2.47
TMC6-213ENST00000589933 COL14A1Q05707 1796 aaKnown RBP30.49■■■□□ 2.47
TMC6-213ENST00000589933 SEPT12Q8IYM1 358 aa30.47■■■□□ 2.47
TMC6-213ENST00000589933 CDK19Q9BWU1 502 aa30.47■■■□□ 2.47
TMC6-213ENST00000589933 ATP7BP35670 1465 aa30.46■■■□□ 2.47
TMC6-213ENST00000589933 SF3B2Q13435 895 aaKnown RBP30.45■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms