RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 NAIPQ13075 1403 aa16.64■□□□□ 0.25
GRN-216ENST00000589923 BCL9LQ86UU0 1499 aa16.64■□□□□ 0.25
GRN-216ENST00000589923 USP21Q9UK80 565 aa16.63■□□□□ 0.25
GRN-216ENST00000589923 HFM1A2PYH4 1435 aa16.62■□□□□ 0.25
GRN-216ENST00000589923 PPARGC1BQ86YN6 1023 aaKnown RBP16.61■□□□□ 0.25
GRN-216ENST00000589923 TRPC5Q9UL62 973 aaPredicted RBP16.61■□□□□ 0.25
GRN-216ENST00000589923 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.6■□□□□ 0.25
GRN-216ENST00000589923 GLI3P10071 1580 aa16.59■□□□□ 0.25
GRN-216ENST00000589923 RRBP1Q9P2E9 1410 aaKnown RBP16.58■□□□□ 0.24
GRN-216ENST00000589923 IFT172Q9UG01 1749 aa16.57■□□□□ 0.24
GRN-216ENST00000589923 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
GRN-216ENST00000589923 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
GRN-216ENST00000589923 TECPR2O15040 1411 aa16.55■□□□□ 0.24
GRN-216ENST00000589923 XPCQ01831 940 aaPredicted RBP16.55■□□□□ 0.24
GRN-216ENST00000589923 KNDC1Q76NI1 1749 aa16.55■□□□□ 0.24
GRN-216ENST00000589923 FMN2Q9NZ56 1722 aa16.55■□□□□ 0.24
GRN-216ENST00000589923 NPHP3Q7Z494 1330 aa16.54■□□□□ 0.24
GRN-216ENST00000589923 SLIT2O94813 1529 aa16.54■□□□□ 0.24
GRN-216ENST00000589923 USP32Q8NFA0 1604 aa16.53■□□□□ 0.24
GRN-216ENST00000589923 RPGRIP1LQ68CZ1 1315 aa16.53■□□□□ 0.24
GRN-216ENST00000589923 ESCO1Q5FWF5 840 aa16.53■□□□□ 0.24
GRN-216ENST00000589923 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
GRN-216ENST00000589923 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.24
GRN-216ENST00000589923 FOXO3O43524 673 aa16.52■□□□□ 0.24
GRN-216ENST00000589923 ADGRF5Q8IZF2 1346 aa16.51■□□□□ 0.23
GRN-216ENST00000589923 GJD4Q96KN9 370 aaPredicted RBP16.51■□□□□ 0.23
GRN-216ENST00000589923 ABCA3Q99758 1704 aa16.5■□□□□ 0.23
GRN-216ENST00000589923 KIF1AQ12756 1690 aa16.5■□□□□ 0.23
GRN-216ENST00000589923 ZRANB1Q9UGI0 708 aa16.5■□□□□ 0.23
GRN-216ENST00000589923 SPATA31E1Q6ZUB1 1445 aa16.5■□□□□ 0.23
GRN-216ENST00000589923 RGPD8O14715 1765 aaPredicted RBP16.49■□□□□ 0.23
GRN-216ENST00000589923 NUTM2FA1L443 756 aa16.49■□□□□ 0.23
GRN-216ENST00000589923 WAPLQ7Z5K2 1190 aa16.49■□□□□ 0.23
GRN-216ENST00000589923 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
GRN-216ENST00000589923 LRPPRCP42704 1394 aaKnown RBP16.48■□□□□ 0.23
GRN-216ENST00000589923 SPATA31A3Q5VYP0 1347 aa16.47■□□□□ 0.23
GRN-216ENST00000589923 FOXD1Q16676 465 aa16.47■□□□□ 0.23
GRN-216ENST00000589923 PIK3C2GO75747 1445 aa16.46■□□□□ 0.23
GRN-216ENST00000589923 BLMP54132 1417 aaPredicted RBP16.46■□□□□ 0.23
GRN-216ENST00000589923 CCDC125Q86Z20 511 aa16.46■□□□□ 0.23
GRN-216ENST00000589923 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
GRN-216ENST00000589923 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
GRN-216ENST00000589923 STK26Q9P289 416 aa16.45■□□□□ 0.22
GRN-216ENST00000589923 ABCC11Q96J66 1382 aa16.45■□□□□ 0.22
GRN-216ENST00000589923 NWD2Q9ULI1 1742 aa16.45■□□□□ 0.22
GRN-216ENST00000589923 CCDC144AA2RUR9 1427 aa16.45■□□□□ 0.22
GRN-216ENST00000589923 LRP5O75197 1615 aa16.44■□□□□ 0.22
GRN-216ENST00000589923 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
GRN-216ENST00000589923 DEFB132Q7Z7B7 95 aa16.43■□□□□ 0.22
GRN-216ENST00000589923 YTHDC2Q9H6S0 1430 aaKnown RBP16.43■□□□□ 0.22
GRN-216ENST00000589923 NRAPQ86VF7 1730 aa16.42■□□□□ 0.22
GRN-216ENST00000589923 TNS3Q68CZ2 1445 aa16.42■□□□□ 0.22
GRN-216ENST00000589923 NRXN1Q9ULB1 1477 aa16.4■□□□□ 0.22
GRN-216ENST00000589923 ANKRD30BQ9BXX2 1392 aa16.39■□□□□ 0.21
GRN-216ENST00000589923 RGL3Q3MIN7 710 aa16.39■□□□□ 0.21
GRN-216ENST00000589923 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
GRN-216ENST00000589923 SEPT12Q8IYM1 358 aa16.39■□□□□ 0.21
GRN-216ENST00000589923 CABLES1Q8TDN4 633 aa16.39■□□□□ 0.21
GRN-216ENST00000589923 TRPM3Q9HCF6 1732 aaPredicted RBP16.39■□□□□ 0.21
GRN-216ENST00000589923 ONECUT3O60422 494 aaPredicted RBP16.37■□□□□ 0.21
GRN-216ENST00000589923 VPS72Q15906 364 aa16.37■□□□□ 0.21
GRN-216ENST00000589923 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
GRN-216ENST00000589923 ALS2Q96Q42 1657 aa16.36■□□□□ 0.21
GRN-216ENST00000589923 SBNO1A3KN83 1393 aa16.35■□□□□ 0.21
GRN-216ENST00000589923 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
GRN-216ENST00000589923 PHF8Q9UPP1 1060 aa16.34■□□□□ 0.21
GRN-216ENST00000589923 SIRT1Q96EB6 747 aa16.33■□□□□ 0.2
GRN-216ENST00000589923 PLEKHG5O94827 1062 aa16.32■□□□□ 0.2
GRN-216ENST00000589923 KRT27Q7Z3Y8 459 aa16.32■□□□□ 0.2
GRN-216ENST00000589923 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
GRN-216ENST00000589923 THSD7AQ9UPZ6 1657 aa16.31■□□□□ 0.2
GRN-216ENST00000589923 ADGRB1O14514 1584 aa16.31■□□□□ 0.2
GRN-216ENST00000589923 DLC1Q96QB1 1528 aa16.31■□□□□ 0.2
GRN-216ENST00000589923 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
GRN-216ENST00000589923 MPHOSPH9Q99550 1183 aa16.31■□□□□ 0.2
GRN-216ENST00000589923 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
GRN-216ENST00000589923 COL14A1Q05707 1796 aaKnown RBP16.31■□□□□ 0.2
GRN-216ENST00000589923 ARHGEF10O15013 1369 aa16.3■□□□□ 0.2
GRN-216ENST00000589923 CFAP70Q5T0N1 1121 aa16.3■□□□□ 0.2
GRN-216ENST00000589923 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
GRN-216ENST00000589923 ANKARQ7Z5J8 1434 aa16.29■□□□□ 0.2
GRN-216ENST00000589923 PSDA5PKW4 1024 aaPredicted RBP16.29■□□□□ 0.2
GRN-216ENST00000589923 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
GRN-216ENST00000589923 PSME1Q06323 249 aa16.28■□□□□ 0.2
GRN-216ENST00000589923 SAFB2Q14151 953 aaKnown RBP eCLIP16.28■□□□□ 0.2
GRN-216ENST00000589923 PRAM1Q96QH2 718 aa16.28■□□□□ 0.2
GRN-216ENST00000589923 HRCP23327 699 aa16.27■□□□□ 0.2
GRN-216ENST00000589923 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.2
GRN-216ENST00000589923 FAM98CQ17RN3 349 aaKnown RBP16.27■□□□□ 0.2
GRN-216ENST00000589923 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
GRN-216ENST00000589923 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.2
GRN-216ENST00000589923 PRR36Q9H6K5 1346 aa16.26■□□□□ 0.19
GRN-216ENST00000589923 DHX57Q6P158 1386 aaKnown RBP16.26■□□□□ 0.19
GRN-216ENST00000589923 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
GRN-216ENST00000589923 LMOD2Q6P5Q4 547 aa16.25■□□□□ 0.19
GRN-216ENST00000589923 TULP4Q9NRJ4 1543 aa16.24■□□□□ 0.19
GRN-216ENST00000589923 BTG4Q9NY30 223 aa16.24■□□□□ 0.19
GRN-216ENST00000589923 DISP2A7MBM2 1401 aa16.24■□□□□ 0.19
GRN-216ENST00000589923 EN1Q05925 392 aaPredicted RBP16.23■□□□□ 0.19
GRN-216ENST00000589923 PHRF1Q9P1Y6 1649 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms