RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 MSH6P52701 1360 aa19.15■□□□□ 0.66
VMP1-210ENST00000589823 ADGRL3Q9HAR2 1447 aa19.15■□□□□ 0.66
VMP1-210ENST00000589823 HSPA5P11021 654 aaKnown RBP19.14■□□□□ 0.65
VMP1-210ENST00000589823 C19orf44Q9H6X5 657 aa19.14■□□□□ 0.65
VMP1-210ENST00000589823 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
VMP1-210ENST00000589823 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.12■□□□□ 0.65
VMP1-210ENST00000589823 SLC24A1O60721 1099 aa19.12■□□□□ 0.65
VMP1-210ENST00000589823 CERKQ8TCT0 537 aa19.12■□□□□ 0.65
VMP1-210ENST00000589823 HIRIP3Q9BW71 556 aaPredicted RBP19.12■□□□□ 0.65
VMP1-210ENST00000589823 XIRP1Q702N8 1843 aaKnown RBP19.11■□□□□ 0.65
VMP1-210ENST00000589823 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
VMP1-210ENST00000589823 SBNO2Q9Y2G9 1366 aa19.11■□□□□ 0.65
VMP1-210ENST00000589823 IQSEC2Q5JU85 1478 aa19.1■□□□□ 0.65
VMP1-210ENST00000589823 ATF3P18847 181 aa19.1■□□□□ 0.65
VMP1-210ENST00000589823 DCCP43146 1447 aa19.09■□□□□ 0.65
VMP1-210ENST00000589823 ADGRB2O60241 1585 aa19.09■□□□□ 0.65
VMP1-210ENST00000589823 EVC2Q86UK5 1308 aa19.08■□□□□ 0.65
VMP1-210ENST00000589823 CDC42BPGQ6DT37 1551 aa19.08■□□□□ 0.65
VMP1-210ENST00000589823 CADPS2Q86UW7 1296 aa19.08■□□□□ 0.64
VMP1-210ENST00000589823 TESK2Q96S53 571 aa19.08■□□□□ 0.64
VMP1-210ENST00000589823 WASLO00401 505 aaPredicted RBP19.07■□□□□ 0.64
VMP1-210ENST00000589823 TMF1P82094 1093 aa19.06■□□□□ 0.64
VMP1-210ENST00000589823 CDK19Q9BWU1 502 aa19.05■□□□□ 0.64
VMP1-210ENST00000589823 SRPK2P78362 688 aaKnown RBP19.04■□□□□ 0.64
VMP1-210ENST00000589823 TOM1O60784 492 aa19.03■□□□□ 0.64
VMP1-210ENST00000589823 TULP4Q9NRJ4 1543 aa19.03■□□□□ 0.64
VMP1-210ENST00000589823 NUTM2FA1L443 756 aa19.02■□□□□ 0.64
VMP1-210ENST00000589823 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
VMP1-210ENST00000589823 FMN2Q9NZ56 1722 aa19.01■□□□□ 0.63
VMP1-210ENST00000589823 UBAP1LF5GYI3 381 aa19■□□□□ 0.63
VMP1-210ENST00000589823 CABP2Q9NPB3 220 aa19■□□□□ 0.63
VMP1-210ENST00000589823 SLAIN2Q9P270 581 aa19■□□□□ 0.63
VMP1-210ENST00000589823 MST1RQ04912 1400 aa19■□□□□ 0.63
VMP1-210ENST00000589823 ANKARQ7Z5J8 1434 aa19■□□□□ 0.63
VMP1-210ENST00000589823 DISP3Q9P2K9 1392 aa18.99■□□□□ 0.63
VMP1-210ENST00000589823 NUDT16Q96DE0 195 aaKnown RBP18.98■□□□□ 0.63
VMP1-210ENST00000589823 PUS7Q96PZ0 661 aaKnown RBP18.98■□□□□ 0.63
VMP1-210ENST00000589823 C1orf167Q5SNV9 1468 aa18.97■□□□□ 0.63
VMP1-210ENST00000589823 ATAD2Q6PL18 1390 aa18.97■□□□□ 0.63
VMP1-210ENST00000589823 PRR36Q9H6K5 1346 aa18.96■□□□□ 0.63
VMP1-210ENST00000589823 ATP7BP35670 1465 aa18.96■□□□□ 0.63
VMP1-210ENST00000589823 ESCO1Q5FWF5 840 aa18.95■□□□□ 0.62
VMP1-210ENST00000589823 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
VMP1-210ENST00000589823 CCDC61Q9Y6R9 512 aa18.95■□□□□ 0.62
VMP1-210ENST00000589823 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
VMP1-210ENST00000589823 USP32Q8NFA0 1604 aa18.93■□□□□ 0.62
VMP1-210ENST00000589823 PIP4K2BP78356 416 aa18.93■□□□□ 0.62
VMP1-210ENST00000589823 ORAI2Q96SN7 254 aa18.93■□□□□ 0.62
VMP1-210ENST00000589823 C11orf95C9JLR9 678 aaPredicted RBP18.92■□□□□ 0.62
VMP1-210ENST00000589823 PPIP5K1Q6PFW1 1433 aa18.91■□□□□ 0.62
VMP1-210ENST00000589823 ITSN1Q15811 1721 aa18.91■□□□□ 0.62
VMP1-210ENST00000589823 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
VMP1-210ENST00000589823 TMC1Q8TDI8 760 aa18.91■□□□□ 0.62
VMP1-210ENST00000589823 PHF8Q9UPP1 1060 aa18.91■□□□□ 0.62
VMP1-210ENST00000589823 PMFBP1Q8TBY8 1022 aa18.9■□□□□ 0.62
VMP1-210ENST00000589823 CABP1Q9NZU7 370 aa18.9■□□□□ 0.62
VMP1-210ENST00000589823 KIF7Q2M1P5 1343 aa18.9■□□□□ 0.62
VMP1-210ENST00000589823 RGPD8O14715 1765 aaPredicted RBP18.9■□□□□ 0.62
VMP1-210ENST00000589823 NINLQ9Y2I6 1382 aa18.9■□□□□ 0.62
VMP1-210ENST00000589823 TOPAZ1Q8N9V7 1692 aa18.89■□□□□ 0.61
VMP1-210ENST00000589823 KIF1AQ12756 1690 aa18.89■□□□□ 0.61
VMP1-210ENST00000589823 PLEKHG3A1L390 1219 aa18.88■□□□□ 0.61
VMP1-210ENST00000589823 NGDNQ8NEJ9 315 aaKnown RBP18.88■□□□□ 0.61
VMP1-210ENST00000589823 CCDC7Q96M83 1385 aa18.88■□□□□ 0.61
VMP1-210ENST00000589823 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
VMP1-210ENST00000589823 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
VMP1-210ENST00000589823 ZNF316A6NFI3 1004 aaPredicted RBP18.86■□□□□ 0.61
VMP1-210ENST00000589823 SLC12A5Q9H2X9 1139 aa18.86■□□□□ 0.61
VMP1-210ENST00000589823 ACEP12821 1306 aa18.85■□□□□ 0.61
VMP1-210ENST00000589823 FOXO3O43524 673 aa18.85■□□□□ 0.61
VMP1-210ENST00000589823 NPHP3Q7Z494 1330 aa18.84■□□□□ 0.61
VMP1-210ENST00000589823 HDGFL2Q7Z4V5 671 aaPredicted RBP18.84■□□□□ 0.61
VMP1-210ENST00000589823 TERF2IPQ9NYB0 399 aa18.84■□□□□ 0.61
VMP1-210ENST00000589823 POLR3AO14802 1390 aaPredicted RBP18.83■□□□□ 0.61
VMP1-210ENST00000589823 PSME1Q06323 249 aa18.83■□□□□ 0.6
VMP1-210ENST00000589823 ZNF692Q9BU19 519 aaPredicted RBP18.82■□□□□ 0.6
VMP1-210ENST00000589823 FBXO41Q8TF61 875 aa18.81■□□□□ 0.6
VMP1-210ENST00000589823 DDX17Q92841 729 aaKnown RBP18.81■□□□□ 0.6
VMP1-210ENST00000589823 MYOM1P52179 1685 aa18.81■□□□□ 0.6
VMP1-210ENST00000589823 ANKRD36BQ8N2N9 1353 aa18.81■□□□□ 0.6
VMP1-210ENST00000589823 KRT28Q7Z3Y7 464 aa18.8■□□□□ 0.6
VMP1-210ENST00000589823 CPSF1Q10570 1443 aaKnown RBP18.8■□□□□ 0.6
VMP1-210ENST00000589823 KTN1Q86UP2 1357 aaKnown RBP18.8■□□□□ 0.6
VMP1-210ENST00000589823 NHSL1Q5SYE7 1610 aa18.79■□□□□ 0.6
VMP1-210ENST00000589823 AHDC1Q5TGY3 1603 aaPredicted RBP18.79■□□□□ 0.6
VMP1-210ENST00000589823 A0A1W2PP64 1363 aa18.79■□□□□ 0.6
VMP1-210ENST00000589823 CD163L1Q9NR16 1453 aa18.78■□□□□ 0.6
VMP1-210ENST00000589823 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
VMP1-210ENST00000589823 USP6P35125 1406 aa18.77■□□□□ 0.6
VMP1-210ENST00000589823 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
VMP1-210ENST00000589823 SOS2Q07890 1332 aaPredicted RBP18.76■□□□□ 0.59
VMP1-210ENST00000589823 AKAP12Q02952 1782 aa18.76■□□□□ 0.59
VMP1-210ENST00000589823 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
VMP1-210ENST00000589823 PANK3Q9H999 370 aa18.76■□□□□ 0.59
VMP1-210ENST00000589823 PXDNQ92626 1479 aa18.76■□□□□ 0.59
VMP1-210ENST00000589823 PHLPP1O60346 1717 aa18.75■□□□□ 0.59
VMP1-210ENST00000589823 EDC4Q6P2E9 1401 aaKnown RBP18.74■□□□□ 0.59
VMP1-210ENST00000589823 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
VMP1-210ENST00000589823 LRRC59Q96AG4 307 aaKnown RBP18.73■□□□□ 0.59
VMP1-210ENST00000589823 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms