RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 CDC42BPGQ6DT37 1551 aa21.17■□□□□ 0.98
MBD1-220ENST00000589758 KNDC1Q76NI1 1749 aa21.16■□□□□ 0.98
MBD1-220ENST00000589758 PNPLA6Q8IY17 1366 aa21.16■□□□□ 0.98
MBD1-220ENST00000589758 TMEM132EQ6IEE7 984 aa21.16■□□□□ 0.98
MBD1-220ENST00000589758 MYOM2P54296 1465 aa21.15■□□□□ 0.98
MBD1-220ENST00000589758 SOS2Q07890 1332 aaPredicted RBP21.15■□□□□ 0.98
MBD1-220ENST00000589758 HRCP23327 699 aa21.15■□□□□ 0.98
MBD1-220ENST00000589758 C14orf93Q9H972 538 aaKnown RBP21.15■□□□□ 0.98
MBD1-220ENST00000589758 YTHDC2Q9H6S0 1430 aaKnown RBP21.14■□□□□ 0.98
MBD1-220ENST00000589758 WAPLQ7Z5K2 1190 aa21.14■□□□□ 0.97
MBD1-220ENST00000589758 SIRT1Q96EB6 747 aa21.14■□□□□ 0.97
MBD1-220ENST00000589758 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
MBD1-220ENST00000589758 ESCO1Q5FWF5 840 aa21.12■□□□□ 0.97
MBD1-220ENST00000589758 DHX57Q6P158 1386 aaKnown RBP21.11■□□□□ 0.97
MBD1-220ENST00000589758 NPHP3Q7Z494 1330 aa21.1■□□□□ 0.97
MBD1-220ENST00000589758 AFF2P51816 1311 aa21.09■□□□□ 0.97
MBD1-220ENST00000589758 CFAP70Q5T0N1 1121 aa21.09■□□□□ 0.97
MBD1-220ENST00000589758 PLEKHH1Q9ULM0 1364 aa21.09■□□□□ 0.97
MBD1-220ENST00000589758 RXRBP28702 533 aa21.08■□□□□ 0.97
MBD1-220ENST00000589758 C8orf37Q96NL8 207 aa21.07■□□□□ 0.96
MBD1-220ENST00000589758 STAC3Q96MF2 364 aa21.06■□□□□ 0.96
MBD1-220ENST00000589758 FMN2Q9NZ56 1722 aa21.04■□□□□ 0.96
MBD1-220ENST00000589758 NUTM2FA1L443 756 aa21.04■□□□□ 0.96
MBD1-220ENST00000589758 FOXO3O43524 673 aa21.04■□□□□ 0.96
MBD1-220ENST00000589758 ADAMTS2O95450 1211 aa21.03■□□□□ 0.96
MBD1-220ENST00000589758 NGLY1Q96IV0 654 aa21.03■□□□□ 0.96
MBD1-220ENST00000589758 COL22A1Q8NFW1 1626 aaPredicted RBP21.03■□□□□ 0.96
MBD1-220ENST00000589758 PXDNQ92626 1479 aa21.02■□□□□ 0.96
MBD1-220ENST00000589758 CDK12Q9NYV4 1490 aaPredicted RBP21.02■□□□□ 0.96
MBD1-220ENST00000589758 DLC1Q96QB1 1528 aa21.01■□□□□ 0.95
MBD1-220ENST00000589758 DCAF11Q8TEB1 546 aa21.01■□□□□ 0.95
MBD1-220ENST00000589758 QTRT2Q9H974 415 aaKnown RBP21.01■□□□□ 0.95
MBD1-220ENST00000589758 KIF1AQ12756 1690 aa21■□□□□ 0.95
MBD1-220ENST00000589758 PRAM1Q96QH2 718 aa21■□□□□ 0.95
MBD1-220ENST00000589758 POGKQ9P215 609 aa20.99■□□□□ 0.95
MBD1-220ENST00000589758 KDM2AQ9Y2K7 1162 aa20.99■□□□□ 0.95
MBD1-220ENST00000589758 RBM6P78332 1123 aaKnown RBP20.98■□□□□ 0.95
MBD1-220ENST00000589758 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
MBD1-220ENST00000589758 ADGRB1O14514 1584 aa20.97■□□□□ 0.95
MBD1-220ENST00000589758 SAFB2Q14151 953 aaKnown RBP eCLIP20.96■□□□□ 0.95
MBD1-220ENST00000589758 USP21Q9UK80 565 aa20.96■□□□□ 0.95
MBD1-220ENST00000589758 PHF8Q9UPP1 1060 aa20.96■□□□□ 0.95
MBD1-220ENST00000589758 FNBP4Q8N3X1 1017 aaPredicted RBP20.95■□□□□ 0.94
MBD1-220ENST00000589758 TRAK1Q9UPV9 953 aa20.95■□□□□ 0.94
MBD1-220ENST00000589758 PSME1Q06323 249 aa20.94■□□□□ 0.94
MBD1-220ENST00000589758 KRT28Q7Z3Y7 464 aa20.94■□□□□ 0.94
MBD1-220ENST00000589758 SPATA31A3Q5VYP0 1347 aa20.94■□□□□ 0.94
MBD1-220ENST00000589758 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
MBD1-220ENST00000589758 TRPC5Q9UL62 973 aaPredicted RBP20.93■□□□□ 0.94
MBD1-220ENST00000589758 ANKARQ7Z5J8 1434 aa20.93■□□□□ 0.94
MBD1-220ENST00000589758 UPF1Q92900 1129 aaKnown RBP eCLIP20.92■□□□□ 0.94
MBD1-220ENST00000589758 ADGRB2O60241 1585 aa20.92■□□□□ 0.94
MBD1-220ENST00000589758 MARF1Q9Y4F3 1742 aaKnown RBP20.91■□□□□ 0.94
MBD1-220ENST00000589758 EIF3AQ14152 1382 aaKnown RBP20.9■□□□□ 0.94
MBD1-220ENST00000589758 RGS12O14924 1447 aa20.89■□□□□ 0.94
MBD1-220ENST00000589758 SBNO1A3KN83 1393 aa20.88■□□□□ 0.93
MBD1-220ENST00000589758 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
MBD1-220ENST00000589758 MINK1Q8N4C8 1332 aaPredicted RBP20.87■□□□□ 0.93
MBD1-220ENST00000589758 ATRNO75882 1429 aa20.87■□□□□ 0.93
MBD1-220ENST00000589758 USP32Q8NFA0 1604 aa20.86■□□□□ 0.93
MBD1-220ENST00000589758 HIRIP3Q9BW71 556 aaPredicted RBP20.86■□□□□ 0.93
MBD1-220ENST00000589758 WASLO00401 505 aaPredicted RBP20.85■□□□□ 0.93
MBD1-220ENST00000589758 PMFBP1Q8TBY8 1022 aa20.85■□□□□ 0.93
MBD1-220ENST00000589758 BCL9LQ86UU0 1499 aa20.85■□□□□ 0.93
MBD1-220ENST00000589758 ARHGEF10O15013 1369 aa20.85■□□□□ 0.93
MBD1-220ENST00000589758 HAP1P54257 671 aaPredicted RBP20.84■□□□□ 0.93
MBD1-220ENST00000589758 TULP4Q9NRJ4 1543 aa20.83■□□□□ 0.93
MBD1-220ENST00000589758 KIAA1210Q9ULL0 1709 aa20.82■□□□□ 0.92
MBD1-220ENST00000589758 LMOD2Q6P5Q4 547 aa20.82■□□□□ 0.92
MBD1-220ENST00000589758 ARHGEF28Q8N1W1 1705 aaKnown RBP20.81■□□□□ 0.92
MBD1-220ENST00000589758 GPRASP1Q5JY77 1395 aa20.81■□□□□ 0.92
MBD1-220ENST00000589758 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.81■□□□□ 0.92
MBD1-220ENST00000589758 SLIT2O94813 1529 aa20.8■□□□□ 0.92
MBD1-220ENST00000589758 UNC5CLQ8IV45 518 aa20.8■□□□□ 0.92
MBD1-220ENST00000589758 GJD4Q96KN9 370 aaPredicted RBP20.8■□□□□ 0.92
MBD1-220ENST00000589758 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
MBD1-220ENST00000589758 ATAD2Q6PL18 1390 aa20.79■□□□□ 0.92
MBD1-220ENST00000589758 CABLES1Q8TDN4 633 aa20.78■□□□□ 0.92
MBD1-220ENST00000589758 NGDNQ8NEJ9 315 aaKnown RBP20.77■□□□□ 0.92
MBD1-220ENST00000589758 TRPM3Q9HCF6 1732 aaPredicted RBP20.76■□□□□ 0.91
MBD1-220ENST00000589758 ITSN1Q15811 1721 aa20.75■□□□□ 0.91
MBD1-220ENST00000589758 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
MBD1-220ENST00000589758 ABCA3Q99758 1704 aa20.75■□□□□ 0.91
MBD1-220ENST00000589758 PLEKHG5O94827 1062 aa20.73■□□□□ 0.91
MBD1-220ENST00000589758 NBPF1Q3BBV0 1214 aa20.73■□□□□ 0.91
MBD1-220ENST00000589758 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
MBD1-220ENST00000589758 ATP7BP35670 1465 aa20.73■□□□□ 0.91
MBD1-220ENST00000589758 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
MBD1-220ENST00000589758 NWD2Q9ULI1 1742 aa20.73■□□□□ 0.91
MBD1-220ENST00000589758 RALGAPBQ86X10 1494 aa20.72■□□□□ 0.91
MBD1-220ENST00000589758 VPS72Q15906 364 aa20.71■□□□□ 0.91
MBD1-220ENST00000589758 PAK3O75914 559 aaPredicted RBP20.7■□□□□ 0.9
MBD1-220ENST00000589758 GLI3P10071 1580 aa20.7■□□□□ 0.9
MBD1-220ENST00000589758 PLCH1Q4KWH8 1693 aa20.7■□□□□ 0.9
MBD1-220ENST00000589758 FAM83GA6ND36 823 aa20.69■□□□□ 0.9
MBD1-220ENST00000589758 CCDC61Q9Y6R9 512 aa20.69■□□□□ 0.9
MBD1-220ENST00000589758 CCDC125Q86Z20 511 aa20.68■□□□□ 0.9
MBD1-220ENST00000589758 L3MBTL2Q969R5 705 aa20.68■□□□□ 0.9
MBD1-220ENST00000589758 CCDC9Q9Y3X0 531 aaKnown RBP20.67■□□□□ 0.9
MBD1-220ENST00000589758 CENPJQ9HC77 1338 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms