RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
VAT1-206ENST00000589709 LAMC1P11047 1609 aa18.07■□□□□ 0.48
VAT1-206ENST00000589709 HRCP23327 699 aa18.06■□□□□ 0.48
VAT1-206ENST00000589709 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
VAT1-206ENST00000589709 C14orf93Q9H972 538 aaKnown RBP18.06■□□□□ 0.48
VAT1-206ENST00000589709 STK26Q9P289 416 aa18.06■□□□□ 0.48
VAT1-206ENST00000589709 CDC42BPGQ6DT37 1551 aa18.04■□□□□ 0.48
VAT1-206ENST00000589709 WAPLQ7Z5K2 1190 aa18.04■□□□□ 0.48
VAT1-206ENST00000589709 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
VAT1-206ENST00000589709 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
VAT1-206ENST00000589709 MYOM2P54296 1465 aa18.01■□□□□ 0.47
VAT1-206ENST00000589709 AFF2P51816 1311 aa18.01■□□□□ 0.47
VAT1-206ENST00000589709 ESCO1Q5FWF5 840 aa18.01■□□□□ 0.47
VAT1-206ENST00000589709 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
VAT1-206ENST00000589709 RXRBP28702 533 aa18■□□□□ 0.47
VAT1-206ENST00000589709 CFAP70Q5T0N1 1121 aa18■□□□□ 0.47
VAT1-206ENST00000589709 DHX57Q6P158 1386 aaKnown RBP18■□□□□ 0.47
VAT1-206ENST00000589709 PLEKHH1Q9ULM0 1364 aa18■□□□□ 0.47
VAT1-206ENST00000589709 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
VAT1-206ENST00000589709 C8orf37Q96NL8 207 aa17.98■□□□□ 0.47
VAT1-206ENST00000589709 FOXO3O43524 673 aa17.97■□□□□ 0.47
VAT1-206ENST00000589709 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
VAT1-206ENST00000589709 CDK12Q9NYV4 1490 aaPredicted RBP17.96■□□□□ 0.47
VAT1-206ENST00000589709 ADAMTS2O95450 1211 aa17.95■□□□□ 0.46
VAT1-206ENST00000589709 NGLY1Q96IV0 654 aa17.95■□□□□ 0.46
VAT1-206ENST00000589709 PXDNQ92626 1479 aa17.95■□□□□ 0.46
VAT1-206ENST00000589709 NUTM2FA1L443 756 aa17.94■□□□□ 0.46
VAT1-206ENST00000589709 QTRT2Q9H974 415 aaKnown RBP17.94■□□□□ 0.46
VAT1-206ENST00000589709 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
VAT1-206ENST00000589709 COL22A1Q8NFW1 1626 aaPredicted RBP17.92■□□□□ 0.46
VAT1-206ENST00000589709 FNBP4Q8N3X1 1017 aaPredicted RBP17.92■□□□□ 0.46
VAT1-206ENST00000589709 PRAM1Q96QH2 718 aa17.92■□□□□ 0.46
VAT1-206ENST00000589709 FMN2Q9NZ56 1722 aa17.91■□□□□ 0.46
VAT1-206ENST00000589709 DLC1Q96QB1 1528 aa17.91■□□□□ 0.46
VAT1-206ENST00000589709 XPCQ01831 940 aaPredicted RBP17.9■□□□□ 0.46
VAT1-206ENST00000589709 DCAF11Q8TEB1 546 aa17.9■□□□□ 0.46
VAT1-206ENST00000589709 ADGRB1O14514 1584 aa17.89■□□□□ 0.45
VAT1-206ENST00000589709 UPF1Q92900 1129 aaKnown RBP eCLIP17.89■□□□□ 0.45
VAT1-206ENST00000589709 POGKQ9P215 609 aa17.89■□□□□ 0.45
VAT1-206ENST00000589709 USP21Q9UK80 565 aa17.89■□□□□ 0.45
VAT1-206ENST00000589709 PHF8Q9UPP1 1060 aa17.88■□□□□ 0.45
VAT1-206ENST00000589709 KDM2AQ9Y2K7 1162 aa17.88■□□□□ 0.45
VAT1-206ENST00000589709 SPATA31A3Q5VYP0 1347 aa17.88■□□□□ 0.45
VAT1-206ENST00000589709 KRT28Q7Z3Y7 464 aa17.87■□□□□ 0.45
VAT1-206ENST00000589709 TRPC5Q9UL62 973 aaPredicted RBP17.87■□□□□ 0.45
VAT1-206ENST00000589709 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
VAT1-206ENST00000589709 SAFB2Q14151 953 aaKnown RBP eCLIP17.86■□□□□ 0.45
VAT1-206ENST00000589709 PSME1Q06323 249 aa17.85■□□□□ 0.45
VAT1-206ENST00000589709 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
VAT1-206ENST00000589709 ANKARQ7Z5J8 1434 aa17.84■□□□□ 0.45
VAT1-206ENST00000589709 RGS12O14924 1447 aa17.83■□□□□ 0.45
VAT1-206ENST00000589709 ATRNO75882 1429 aa17.82■□□□□ 0.44
VAT1-206ENST00000589709 SBNO1A3KN83 1393 aa17.82■□□□□ 0.44
VAT1-206ENST00000589709 ADGRB2O60241 1585 aa17.82■□□□□ 0.44
VAT1-206ENST00000589709 BCL9LQ86UU0 1499 aa17.82■□□□□ 0.44
VAT1-206ENST00000589709 EIF3AQ14152 1382 aaKnown RBP17.8■□□□□ 0.44
VAT1-206ENST00000589709 TNS3Q68CZ2 1445 aa17.8■□□□□ 0.44
VAT1-206ENST00000589709 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
VAT1-206ENST00000589709 MINK1Q8N4C8 1332 aaPredicted RBP17.79■□□□□ 0.44
VAT1-206ENST00000589709 WASLO00401 505 aaPredicted RBP17.79■□□□□ 0.44
VAT1-206ENST00000589709 HIRIP3Q9BW71 556 aaPredicted RBP17.79■□□□□ 0.44
VAT1-206ENST00000589709 PMFBP1Q8TBY8 1022 aa17.78■□□□□ 0.44
VAT1-206ENST00000589709 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
VAT1-206ENST00000589709 USP32Q8NFA0 1604 aa17.77■□□□□ 0.44
VAT1-206ENST00000589709 UNC5CLQ8IV45 518 aa17.77■□□□□ 0.44
VAT1-206ENST00000589709 GJD4Q96KN9 370 aaPredicted RBP17.77■□□□□ 0.44
VAT1-206ENST00000589709 MARF1Q9Y4F3 1742 aaKnown RBP17.77■□□□□ 0.44
VAT1-206ENST00000589709 PRR36Q9H6K5 1346 aa17.76■□□□□ 0.43
VAT1-206ENST00000589709 SLIT2O94813 1529 aa17.76■□□□□ 0.43
VAT1-206ENST00000589709 TULP4Q9NRJ4 1543 aa17.74■□□□□ 0.43
VAT1-206ENST00000589709 HAP1P54257 671 aaPredicted RBP17.74■□□□□ 0.43
VAT1-206ENST00000589709 CABLES1Q8TDN4 633 aa17.74■□□□□ 0.43
VAT1-206ENST00000589709 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
VAT1-206ENST00000589709 ATAD2Q6PL18 1390 aa17.74■□□□□ 0.43
VAT1-206ENST00000589709 LMOD2Q6P5Q4 547 aa17.73■□□□□ 0.43
VAT1-206ENST00000589709 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.71■□□□□ 0.43
VAT1-206ENST00000589709 KIAA1210Q9ULL0 1709 aa17.7■□□□□ 0.42
VAT1-206ENST00000589709 NGDNQ8NEJ9 315 aaKnown RBP17.7■□□□□ 0.42
VAT1-206ENST00000589709 NUDT16Q96DE0 195 aaKnown RBP17.7■□□□□ 0.42
VAT1-206ENST00000589709 ARHGEF28Q8N1W1 1705 aaKnown RBP17.69■□□□□ 0.42
VAT1-206ENST00000589709 VPS72Q15906 364 aa17.69■□□□□ 0.42
VAT1-206ENST00000589709 NBPF1Q3BBV0 1214 aa17.69■□□□□ 0.42
VAT1-206ENST00000589709 RALGAPBQ86X10 1494 aa17.69■□□□□ 0.42
VAT1-206ENST00000589709 FAM83GA6ND36 823 aa17.68■□□□□ 0.42
VAT1-206ENST00000589709 CDK19Q9BWU1 502 aa17.68■□□□□ 0.42
VAT1-206ENST00000589709 TRPM3Q9HCF6 1732 aaPredicted RBP17.67■□□□□ 0.42
VAT1-206ENST00000589709 CCDC125Q86Z20 511 aa17.67■□□□□ 0.42
VAT1-206ENST00000589709 ATP7BP35670 1465 aa17.67■□□□□ 0.42
VAT1-206ENST00000589709 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
VAT1-206ENST00000589709 PLEKHG5O94827 1062 aa17.66■□□□□ 0.42
VAT1-206ENST00000589709 CCDC61Q9Y6R9 512 aa17.66■□□□□ 0.42
VAT1-206ENST00000589709 GLI3P10071 1580 aa17.66■□□□□ 0.42
VAT1-206ENST00000589709 ALS2Q96Q42 1657 aa17.64■□□□□ 0.42
VAT1-206ENST00000589709 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.41
VAT1-206ENST00000589709 PLEKHG3A1L390 1219 aa17.64■□□□□ 0.41
VAT1-206ENST00000589709 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.41
VAT1-206ENST00000589709 ABCA3Q99758 1704 aa17.64■□□□□ 0.41
VAT1-206ENST00000589709 PAK3O75914 559 aaPredicted RBP17.63■□□□□ 0.41
VAT1-206ENST00000589709 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
VAT1-206ENST00000589709 ITSN1Q15811 1721 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms