RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 TMEM132EQ6IEE7 984 aa17.56■□□□□ 0.4
MBD1-218ENST00000589541 WAPLQ7Z5K2 1190 aa17.56■□□□□ 0.4
MBD1-218ENST00000589541 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
MBD1-218ENST00000589541 NGLY1Q96IV0 654 aa17.56■□□□□ 0.4
MBD1-218ENST00000589541 QTRT2Q9H974 415 aaKnown RBP17.56■□□□□ 0.4
MBD1-218ENST00000589541 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
MBD1-218ENST00000589541 CDK12Q9NYV4 1490 aaPredicted RBP17.55■□□□□ 0.4
MBD1-218ENST00000589541 LRPPRCP42704 1394 aaKnown RBP17.54■□□□□ 0.4
MBD1-218ENST00000589541 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
MBD1-218ENST00000589541 TECPR2O15040 1411 aa17.54■□□□□ 0.4
MBD1-218ENST00000589541 PIK3C2GO75747 1445 aa17.54■□□□□ 0.4
MBD1-218ENST00000589541 ABCC11Q96J66 1382 aa17.53■□□□□ 0.4
MBD1-218ENST00000589541 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
MBD1-218ENST00000589541 NPHP3Q7Z494 1330 aa17.52■□□□□ 0.4
MBD1-218ENST00000589541 FOXO3O43524 673 aa17.52■□□□□ 0.4
MBD1-218ENST00000589541 RBM6P78332 1123 aaKnown RBP17.52■□□□□ 0.4
MBD1-218ENST00000589541 XPCQ01831 940 aaPredicted RBP17.52■□□□□ 0.4
MBD1-218ENST00000589541 PLEKHH1Q9ULM0 1364 aa17.52■□□□□ 0.39
MBD1-218ENST00000589541 RGS12O14924 1447 aa17.5■□□□□ 0.39
MBD1-218ENST00000589541 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
MBD1-218ENST00000589541 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
MBD1-218ENST00000589541 USP21Q9UK80 565 aa17.49■□□□□ 0.39
MBD1-218ENST00000589541 PXDNQ92626 1479 aa17.49■□□□□ 0.39
MBD1-218ENST00000589541 C14orf93Q9H972 538 aaKnown RBP17.47■□□□□ 0.39
MBD1-218ENST00000589541 COL22A1Q8NFW1 1626 aaPredicted RBP17.47■□□□□ 0.39
MBD1-218ENST00000589541 MYOM2P54296 1465 aa17.46■□□□□ 0.39
MBD1-218ENST00000589541 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
MBD1-218ENST00000589541 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
MBD1-218ENST00000589541 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
MBD1-218ENST00000589541 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.39
MBD1-218ENST00000589541 TRPC5Q9UL62 973 aaPredicted RBP17.45■□□□□ 0.38
MBD1-218ENST00000589541 NRXN1Q9ULB1 1477 aa17.44■□□□□ 0.38
MBD1-218ENST00000589541 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
MBD1-218ENST00000589541 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
MBD1-218ENST00000589541 SIRT1Q96EB6 747 aa17.43■□□□□ 0.38
MBD1-218ENST00000589541 FMN2Q9NZ56 1722 aa17.42■□□□□ 0.38
MBD1-218ENST00000589541 ATRNO75882 1429 aa17.41■□□□□ 0.38
MBD1-218ENST00000589541 PRAM1Q96QH2 718 aa17.41■□□□□ 0.38
MBD1-218ENST00000589541 BCL9LQ86UU0 1499 aa17.4■□□□□ 0.38
MBD1-218ENST00000589541 KRT28Q7Z3Y7 464 aa17.4■□□□□ 0.38
MBD1-218ENST00000589541 SPATA31A3Q5VYP0 1347 aa17.4■□□□□ 0.38
MBD1-218ENST00000589541 PHF8Q9UPP1 1060 aa17.39■□□□□ 0.37
MBD1-218ENST00000589541 KIF1AQ12756 1690 aa17.39■□□□□ 0.37
MBD1-218ENST00000589541 POGKQ9P215 609 aa17.38■□□□□ 0.37
MBD1-218ENST00000589541 ATAD2Q6PL18 1390 aa17.38■□□□□ 0.37
MBD1-218ENST00000589541 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
MBD1-218ENST00000589541 KDM2AQ9Y2K7 1162 aa17.36■□□□□ 0.37
MBD1-218ENST00000589541 HAP1P54257 671 aaPredicted RBP17.35■□□□□ 0.37
MBD1-218ENST00000589541 PSME1Q06323 249 aa17.35■□□□□ 0.37
MBD1-218ENST00000589541 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
MBD1-218ENST00000589541 MARF1Q9Y4F3 1742 aaKnown RBP17.35■□□□□ 0.37
MBD1-218ENST00000589541 TNS3Q68CZ2 1445 aa17.34■□□□□ 0.37
MBD1-218ENST00000589541 LMOD2Q6P5Q4 547 aa17.34■□□□□ 0.37
MBD1-218ENST00000589541 CABLES1Q8TDN4 633 aa17.34■□□□□ 0.37
MBD1-218ENST00000589541 DCAF11Q8TEB1 546 aa17.34■□□□□ 0.37
MBD1-218ENST00000589541 DLC1Q96QB1 1528 aa17.34■□□□□ 0.37
MBD1-218ENST00000589541 TRAK1Q9UPV9 953 aa17.34■□□□□ 0.37
MBD1-218ENST00000589541 RGPD8O14715 1765 aaPredicted RBP17.33■□□□□ 0.37
MBD1-218ENST00000589541 EP400Q96L91 3159 aa17.33■□□□□ 0.37
MBD1-218ENST00000589541 ADGRB1O14514 1584 aa17.33■□□□□ 0.37
MBD1-218ENST00000589541 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
MBD1-218ENST00000589541 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
MBD1-218ENST00000589541 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
MBD1-218ENST00000589541 SLIT2O94813 1529 aa17.31■□□□□ 0.36
MBD1-218ENST00000589541 MINK1Q8N4C8 1332 aaPredicted RBP17.31■□□□□ 0.36
MBD1-218ENST00000589541 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
MBD1-218ENST00000589541 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
MBD1-218ENST00000589541 SBNO1A3KN83 1393 aa17.3■□□□□ 0.36
MBD1-218ENST00000589541 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
MBD1-218ENST00000589541 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
MBD1-218ENST00000589541 SRCAPQ6ZRS2 3230 aa17.28■□□□□ 0.36
MBD1-218ENST00000589541 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
MBD1-218ENST00000589541 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.27■□□□□ 0.36
MBD1-218ENST00000589541 HRCP23327 699 aa17.27■□□□□ 0.36
MBD1-218ENST00000589541 GLI3P10071 1580 aa17.27■□□□□ 0.35
MBD1-218ENST00000589541 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
MBD1-218ENST00000589541 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
MBD1-218ENST00000589541 EIF3AQ14152 1382 aaKnown RBP17.26■□□□□ 0.35
MBD1-218ENST00000589541 WASLO00401 505 aaPredicted RBP17.25■□□□□ 0.35
MBD1-218ENST00000589541 CCDC9Q9Y3X0 531 aaKnown RBP17.25■□□□□ 0.35
MBD1-218ENST00000589541 GPRASP1Q5JY77 1395 aa17.25■□□□□ 0.35
MBD1-218ENST00000589541 FAM83GA6ND36 823 aa17.24■□□□□ 0.35
MBD1-218ENST00000589541 VPS72Q15906 364 aa17.24■□□□□ 0.35
MBD1-218ENST00000589541 CCDC125Q86Z20 511 aa17.24■□□□□ 0.35
MBD1-218ENST00000589541 TULP4Q9NRJ4 1543 aa17.23■□□□□ 0.35
MBD1-218ENST00000589541 ABCA3Q99758 1704 aa17.22■□□□□ 0.35
MBD1-218ENST00000589541 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
MBD1-218ENST00000589541 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
MBD1-218ENST00000589541 PLCH1Q4KWH8 1693 aa17.22■□□□□ 0.35
MBD1-218ENST00000589541 TRPM3Q9HCF6 1732 aaPredicted RBP17.21■□□□□ 0.35
MBD1-218ENST00000589541 PAK3O75914 559 aaPredicted RBP17.2■□□□□ 0.34
MBD1-218ENST00000589541 ZRANB1Q9UGI0 708 aa17.2■□□□□ 0.34
MBD1-218ENST00000589541 NWD2Q9ULI1 1742 aa17.19■□□□□ 0.34
MBD1-218ENST00000589541 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
MBD1-218ENST00000589541 BTG4Q9NY30 223 aa17.18■□□□□ 0.34
MBD1-218ENST00000589541 BLMP54132 1417 aaPredicted RBP17.18■□□□□ 0.34
MBD1-218ENST00000589541 ALS2Q96Q42 1657 aa17.17■□□□□ 0.34
MBD1-218ENST00000589541 A0A0G2JS52 829 aa17.17■□□□□ 0.34
MBD1-218ENST00000589541 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
MBD1-218ENST00000589541 MYT1Q01538 1121 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms