RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 ESCO1Q5FWF5 840 aa22.95■■□□□ 1.26
ACTN4-211ENST00000589528 NPHP3Q7Z494 1330 aa22.95■■□□□ 1.26
ACTN4-211ENST00000589528 PRAG1Q86YV5 1406 aa22.95■■□□□ 1.26
ACTN4-211ENST00000589528 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
ACTN4-211ENST00000589528 FNBP4Q8N3X1 1017 aaPredicted RBP22.93■■□□□ 1.26
ACTN4-211ENST00000589528 MARF1Q9Y4F3 1742 aaKnown RBP22.93■■□□□ 1.26
ACTN4-211ENST00000589528 CDC42BPGQ6DT37 1551 aa22.93■■□□□ 1.26
ACTN4-211ENST00000589528 ATRNO75882 1429 aa22.91■■□□□ 1.26
ACTN4-211ENST00000589528 SRCAPQ6ZRS2 3230 aa22.89■■□□□ 1.25
ACTN4-211ENST00000589528 LRPPRCP42704 1394 aaKnown RBP22.89■■□□□ 1.25
ACTN4-211ENST00000589528 MYOM2P54296 1465 aa22.88■■□□□ 1.25
ACTN4-211ENST00000589528 FOXO3O43524 673 aa22.88■■□□□ 1.25
ACTN4-211ENST00000589528 XPCQ01831 940 aaPredicted RBP22.88■■□□□ 1.25
ACTN4-211ENST00000589528 EP400Q96L91 3159 aa22.87■■□□□ 1.25
ACTN4-211ENST00000589528 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
ACTN4-211ENST00000589528 PXDNQ92626 1479 aa22.86■■□□□ 1.25
ACTN4-211ENST00000589528 NUTM2FA1L443 756 aa22.86■■□□□ 1.25
ACTN4-211ENST00000589528 STK26Q9P289 416 aa22.86■■□□□ 1.25
ACTN4-211ENST00000589528 CCDC144AA2RUR9 1427 aa22.83■■□□□ 1.25
ACTN4-211ENST00000589528 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
ACTN4-211ENST00000589528 BCL9LQ86UU0 1499 aa22.83■■□□□ 1.25
ACTN4-211ENST00000589528 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
ACTN4-211ENST00000589528 WAPLQ7Z5K2 1190 aa22.82■■□□□ 1.24
ACTN4-211ENST00000589528 CCDC125Q86Z20 511 aa22.82■■□□□ 1.24
ACTN4-211ENST00000589528 GJD4Q96KN9 370 aaPredicted RBP22.81■■□□□ 1.24
ACTN4-211ENST00000589528 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.81■■□□□ 1.24
ACTN4-211ENST00000589528 KNDC1Q76NI1 1749 aa22.8■■□□□ 1.24
ACTN4-211ENST00000589528 KIF1AQ12756 1690 aa22.8■■□□□ 1.24
ACTN4-211ENST00000589528 ANKRD30BQ9BXX2 1392 aa22.79■■□□□ 1.24
ACTN4-211ENST00000589528 TECPR2O15040 1411 aa22.79■■□□□ 1.24
ACTN4-211ENST00000589528 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
ACTN4-211ENST00000589528 HAP1P54257 671 aaPredicted RBP22.78■■□□□ 1.24
ACTN4-211ENST00000589528 FMN2Q9NZ56 1722 aa22.78■■□□□ 1.24
ACTN4-211ENST00000589528 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
ACTN4-211ENST00000589528 UNC5CLQ8IV45 518 aa22.76■■□□□ 1.23
ACTN4-211ENST00000589528 ABCC11Q96J66 1382 aa22.76■■□□□ 1.23
ACTN4-211ENST00000589528 SPATA31A3Q5VYP0 1347 aa22.74■■□□□ 1.23
ACTN4-211ENST00000589528 USP32Q8NFA0 1604 aa22.74■■□□□ 1.23
ACTN4-211ENST00000589528 PLEKHH1Q9ULM0 1364 aa22.74■■□□□ 1.23
ACTN4-211ENST00000589528 RGPD8O14715 1765 aaPredicted RBP22.73■■□□□ 1.23
ACTN4-211ENST00000589528 RALGAPBQ86X10 1494 aa22.73■■□□□ 1.23
ACTN4-211ENST00000589528 KRT28Q7Z3Y7 464 aa22.72■■□□□ 1.23
ACTN4-211ENST00000589528 BRWD3Q6RI45 1802 aa22.72■■□□□ 1.23
ACTN4-211ENST00000589528 SPATA31E1Q6ZUB1 1445 aa22.72■■□□□ 1.23
ACTN4-211ENST00000589528 YTHDC2Q9H6S0 1430 aaKnown RBP22.72■■□□□ 1.23
ACTN4-211ENST00000589528 SLIT2O94813 1529 aa22.72■■□□□ 1.23
ACTN4-211ENST00000589528 GLI3P10071 1580 aa22.72■■□□□ 1.23
ACTN4-211ENST00000589528 PLEKHG5O94827 1062 aa22.71■■□□□ 1.23
ACTN4-211ENST00000589528 SF3B2Q13435 895 aaKnown RBP22.71■■□□□ 1.23
ACTN4-211ENST00000589528 PIK3C2GO75747 1445 aa22.71■■□□□ 1.23
ACTN4-211ENST00000589528 PSME1Q06323 249 aa22.7■■□□□ 1.22
ACTN4-211ENST00000589528 BLMP54132 1417 aaPredicted RBP22.7■■□□□ 1.22
ACTN4-211ENST00000589528 MPHOSPH9Q99550 1183 aa22.69■■□□□ 1.22
ACTN4-211ENST00000589528 CCDC9Q9Y3X0 531 aaKnown RBP22.69■■□□□ 1.22
ACTN4-211ENST00000589528 LMOD2Q6P5Q4 547 aa22.68■■□□□ 1.22
ACTN4-211ENST00000589528 TNS3Q68CZ2 1445 aa22.67■■□□□ 1.22
ACTN4-211ENST00000589528 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
ACTN4-211ENST00000589528 PLCH1Q4KWH8 1693 aa22.67■■□□□ 1.22
ACTN4-211ENST00000589528 NWD2Q9ULI1 1742 aa22.65■■□□□ 1.22
ACTN4-211ENST00000589528 SEPT12Q8IYM1 358 aa22.65■■□□□ 1.22
ACTN4-211ENST00000589528 DHX57Q6P158 1386 aaKnown RBP22.64■■□□□ 1.22
ACTN4-211ENST00000589528 CABLES1Q8TDN4 633 aa22.64■■□□□ 1.21
ACTN4-211ENST00000589528 A0A0G2JS52 829 aa22.63■■□□□ 1.21
ACTN4-211ENST00000589528 MYT1Q01538 1121 aa22.63■■□□□ 1.21
ACTN4-211ENST00000589528 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.212e-6■■□□□ 14.4
ACTN4-211ENST00000589528 VPS72Q15906 364 aa22.63■■□□□ 1.21
ACTN4-211ENST00000589528 SIRT1Q96EB6 747 aa22.63■■□□□ 1.21
ACTN4-211ENST00000589528 ARHGEF10O15013 1369 aa22.63■■□□□ 1.21
ACTN4-211ENST00000589528 ABCA3Q99758 1704 aa22.62■■□□□ 1.21
ACTN4-211ENST00000589528 DEFB132Q7Z7B7 95 aa22.62■■□□□ 1.21
ACTN4-211ENST00000589528 C14orf93Q9H972 538 aaKnown RBP22.61■■□□□ 1.21
ACTN4-211ENST00000589528 SBNO1A3KN83 1393 aa22.61■■□□□ 1.21
ACTN4-211ENST00000589528 NRXN1Q9ULB1 1477 aa22.6■■□□□ 1.21
ACTN4-211ENST00000589528 CFAP70Q5T0N1 1121 aa22.59■■□□□ 1.21
ACTN4-211ENST00000589528 KRT27Q7Z3Y8 459 aa22.59■■□□□ 1.21
ACTN4-211ENST00000589528 PRAM1Q96QH2 718 aa22.59■■□□□ 1.21
ACTN4-211ENST00000589528 POGKQ9P215 609 aa22.59■■□□□ 1.21
ACTN4-211ENST00000589528 PMFBP1Q8TBY8 1022 aa22.57■■□□□ 1.2
ACTN4-211ENST00000589528 ACIN1Q9UKV3 1341 aaKnown RBP22.55■■□□□ 1.2
ACTN4-211ENST00000589528 FAM83GA6ND36 823 aa22.53■■□□□ 1.2
ACTN4-211ENST00000589528 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
ACTN4-211ENST00000589528 ANKARQ7Z5J8 1434 aa22.53■■□□□ 1.2
ACTN4-211ENST00000589528 BAG6P46379 1132 aa22.52■■□□□ 1.2
ACTN4-211ENST00000589528 DLC1Q96QB1 1528 aa22.52■■□□□ 1.19
ACTN4-211ENST00000589528 GPRASP1Q5JY77 1395 aa22.51■■□□□ 1.19
ACTN4-211ENST00000589528 FAM98CQ17RN3 349 aaKnown RBP22.51■■□□□ 1.19
ACTN4-211ENST00000589528 BTG4Q9NY30 223 aa22.5■■□□□ 1.19
ACTN4-211ENST00000589528 NRAPQ86VF7 1730 aa22.5■■□□□ 1.19
ACTN4-211ENST00000589528 ADGRB2O60241 1585 aa22.5■■□□□ 1.19
ACTN4-211ENST00000589528 LRP5O75197 1615 aa22.49■■□□□ 1.19
ACTN4-211ENST00000589528 TRPM3Q9HCF6 1732 aaPredicted RBP22.49■■□□□ 1.19
ACTN4-211ENST00000589528 COL14A1Q05707 1796 aaKnown RBP22.49■■□□□ 1.19
ACTN4-211ENST00000589528 HIRIP3Q9BW71 556 aaPredicted RBP22.49■■□□□ 1.19
ACTN4-211ENST00000589528 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
ACTN4-211ENST00000589528 ALS2Q96Q42 1657 aa22.47■■□□□ 1.19
ACTN4-211ENST00000589528 TRAK1Q9UPV9 953 aa22.47■■□□□ 1.19
ACTN4-211ENST00000589528 MINK1Q8N4C8 1332 aaPredicted RBP22.47■■□□□ 1.19
ACTN4-211ENST00000589528 RGPD1P0DJD0 1748 aa22.46■■□□□ 1.19
ACTN4-211ENST00000589528 PSDA5PKW4 1024 aaPredicted RBP22.45■■□□□ 1.18
ACTN4-211ENST00000589528 PAK3O75914 559 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms