RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 AHDC1Q5TGY3 1603 aaPredicted RBP25.34■■□□□ 1.65
H3F3B-207ENST00000589417 TRAK1Q9UPV9 953 aa25.33■■□□□ 1.65
H3F3B-207ENST00000589417 KIAA1210Q9ULL0 1709 aa25.32■■□□□ 1.64
H3F3B-207ENST00000589417 POGKQ9P215 609 aa25.3■■□□□ 1.64
H3F3B-207ENST00000589417 NBPF1Q3BBV0 1214 aa25.29■■□□□ 1.64
H3F3B-207ENST00000589417 ORAI2Q96SN7 254 aa25.29■■□□□ 1.64
H3F3B-207ENST00000589417 PCGF6Q9BYE7 350 aa25.29■■□□□ 1.64
H3F3B-207ENST00000589417 COL16A1Q07092 1604 aaPredicted RBP25.28■■□□□ 1.64
H3F3B-207ENST00000589417 JCADQ9P266 1359 aa25.28■■□□□ 1.64
H3F3B-207ENST00000589417 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
H3F3B-207ENST00000589417 DISP3Q9P2K9 1392 aa25.23■■□□□ 1.63
H3F3B-207ENST00000589417 SOS2Q07890 1332 aaPredicted RBP25.23■■□□□ 1.63
H3F3B-207ENST00000589417 CLSPNQ9HAW4 1339 aa25.23■■□□□ 1.63
H3F3B-207ENST00000589417 SAFB2Q14151 953 aaKnown RBP eCLIP25.23■■□□□ 1.63
H3F3B-207ENST00000589417 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
H3F3B-207ENST00000589417 ADGRB2O60241 1585 aa25.22■■□□□ 1.63
H3F3B-207ENST00000589417 ESCO1Q5FWF5 840 aa25.22■■□□□ 1.63
H3F3B-207ENST00000589417 LRRC59Q96AG4 307 aaKnown RBP25.22■■□□□ 1.63
H3F3B-207ENST00000589417 MED1Q15648 1581 aaPredicted RBP25.22■■□□□ 1.63
H3F3B-207ENST00000589417 TONSLQ96HA7 1378 aa25.2■■□□□ 1.63
H3F3B-207ENST00000589417 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
H3F3B-207ENST00000589417 SPATA31A6Q5VVP1 1343 aa25.19■■□□□ 1.62
H3F3B-207ENST00000589417 NBPF8Q3BBV2 869 aa25.19■■□□□ 1.62
H3F3B-207ENST00000589417 ANKARQ7Z5J8 1434 aa25.19■■□□□ 1.62
H3F3B-207ENST00000589417 NPHP3Q7Z494 1330 aa25.18■■□□□ 1.62
H3F3B-207ENST00000589417 WASLO00401 505 aaPredicted RBP25.18■■□□□ 1.62
H3F3B-207ENST00000589417 DDX17Q92841 729 aaKnown RBP25.18■■□□□ 1.62
H3F3B-207ENST00000589417 GPRASP1Q5JY77 1395 aa25.18■■□□□ 1.62
H3F3B-207ENST00000589417 EIF3AQ14152 1382 aaKnown RBP25.17■■□□□ 1.62
H3F3B-207ENST00000589417 MINK1Q8N4C8 1332 aaPredicted RBP25.16■■□□□ 1.62
H3F3B-207ENST00000589417 NUTM2FA1L443 756 aa25.16■■□□□ 1.62
H3F3B-207ENST00000589417 ARHGEF28Q8N1W1 1705 aaKnown RBP25.16■■□□□ 1.62
H3F3B-207ENST00000589417 HIRIP3Q9BW71 556 aaPredicted RBP25.14■■□□□ 1.62
H3F3B-207ENST00000589417 TIMELESSQ9UNS1 1208 aa25.14■■□□□ 1.62
H3F3B-207ENST00000589417 TRPM1Q7Z4N2 1603 aa25.14■■□□□ 1.61
H3F3B-207ENST00000589417 FOXO3O43524 673 aa25.13■■□□□ 1.61
H3F3B-207ENST00000589417 ROCK2O75116 1388 aaKnown RBP25.13■■□□□ 1.61
H3F3B-207ENST00000589417 PHF8Q9UPP1 1060 aa25.12■■□□□ 1.61
H3F3B-207ENST00000589417 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
H3F3B-207ENST00000589417 SHPRHQ149N8 1683 aa25.11■■□□□ 1.61
H3F3B-207ENST00000589417 PXDNQ92626 1479 aa25.1■■□□□ 1.61
H3F3B-207ENST00000589417 PNPLA6Q8IY17 1366 aa25.1■■□□□ 1.61
H3F3B-207ENST00000589417 TULP4Q9NRJ4 1543 aa25.1■■□□□ 1.61
H3F3B-207ENST00000589417 PRR36Q9H6K5 1346 aa25.1■■□□□ 1.61
H3F3B-207ENST00000589417 KIF1AQ12756 1690 aa25.07■■□□□ 1.6
H3F3B-207ENST00000589417 CDK19Q9BWU1 502 aa25.07■■□□□ 1.6
H3F3B-207ENST00000589417 USP32Q8NFA0 1604 aa25.07■■□□□ 1.6
H3F3B-207ENST00000589417 RALGAPBQ86X10 1494 aa25.06■■□□□ 1.6
H3F3B-207ENST00000589417 PHF23Q9BUL5 403 aaPredicted RBP25.05■■□□□ 1.6
H3F3B-207ENST00000589417 RGS17Q9UGC6 210 aaPredicted RBP25.05■■□□□ 1.6
H3F3B-207ENST00000589417 KRT28Q7Z3Y7 464 aa25.04■■□□□ 1.6
H3F3B-207ENST00000589417 NUDT16Q96DE0 195 aaKnown RBP25.04■■□□□ 1.6
H3F3B-207ENST00000589417 LRP6O75581 1613 aa25.04■■□□□ 1.6
H3F3B-207ENST00000589417 PSME1Q06323 249 aa25.03■■□□□ 1.6
H3F3B-207ENST00000589417 ATP7BP35670 1465 aa25.02■■□□□ 1.6
H3F3B-207ENST00000589417 CARD11Q9BXL7 1154 aa25.02■■□□□ 1.6
H3F3B-207ENST00000589417 CCDC61Q9Y6R9 512 aa25.02■■□□□ 1.6
H3F3B-207ENST00000589417 SPATA31A3Q5VYP0 1347 aa25.02■■□□□ 1.6
H3F3B-207ENST00000589417 ILDR2Q71H61 639 aa25.01■■□□□ 1.59
H3F3B-207ENST00000589417 SBNO1A3KN83 1393 aa25.01■■□□□ 1.59
H3F3B-207ENST00000589417 XPCQ01831 940 aaPredicted RBP25■■□□□ 1.59
H3F3B-207ENST00000589417 PMFBP1Q8TBY8 1022 aa25■■□□□ 1.59
H3F3B-207ENST00000589417 PLEKHG3A1L390 1219 aa24.99■■□□□ 1.59
H3F3B-207ENST00000589417 RGPD8O14715 1765 aaPredicted RBP24.99■■□□□ 1.59
H3F3B-207ENST00000589417 SBNO2Q9Y2G9 1366 aa24.99■■□□□ 1.59
H3F3B-207ENST00000589417 COL22A1Q8NFW1 1626 aaPredicted RBP24.97■■□□□ 1.59
H3F3B-207ENST00000589417 NUTM2BA6NNL0 878 aaPredicted RBP24.96■■□□□ 1.59
H3F3B-207ENST00000589417 NUTM2EB1AL46 878 aaPredicted RBP24.96■■□□□ 1.59
H3F3B-207ENST00000589417 NUTM2AQ8IVF1 878 aaPredicted RBP24.96■■□□□ 1.59
H3F3B-207ENST00000589417 EVC2Q86UK5 1308 aa24.95■■□□□ 1.58
H3F3B-207ENST00000589417 CCER1Q8TC90 406 aaPredicted RBP24.95■■□□□ 1.58
H3F3B-207ENST00000589417 POLR3AO14802 1390 aaPredicted RBP24.94■■□□□ 1.58
H3F3B-207ENST00000589417 TNS3Q68CZ2 1445 aa24.94■■□□□ 1.58
H3F3B-207ENST00000589417 SRPK2P78362 688 aaKnown RBP24.93■■□□□ 1.58
H3F3B-207ENST00000589417 MEX3CQ5U5Q3 659 aaKnown RBP24.93■■□□□ 1.58
H3F3B-207ENST00000589417 NGDNQ8NEJ9 315 aaKnown RBP24.93■■□□□ 1.58
H3F3B-207ENST00000589417 QRICH2Q9H0J4 1663 aa24.92■■□□□ 1.58
H3F3B-207ENST00000589417 CABP2Q9NPB3 220 aa24.92■■□□□ 1.58
H3F3B-207ENST00000589417 ARHGEF10O15013 1369 aa24.91■■□□□ 1.58
H3F3B-207ENST00000589417 ZNF772Q68DY9 489 aaPredicted RBP24.9■■□□□ 1.58
H3F3B-207ENST00000589417 POTEAQ6S8J7 498 aa24.89■■□□□ 1.58
H3F3B-207ENST00000589417 ACEP12821 1306 aa24.88■■□□□ 1.57
H3F3B-207ENST00000589417 TOPAZ1Q8N9V7 1692 aa24.88■■□□□ 1.57
H3F3B-207ENST00000589417 ITSN1Q15811 1721 aa24.88■■□□□ 1.57
H3F3B-207ENST00000589417 SLC24A1O60721 1099 aa24.87■■□□□ 1.57
H3F3B-207ENST00000589417 PUS7Q96PZ0 661 aaKnown RBP24.87■■□□□ 1.57
H3F3B-207ENST00000589417 PPIP5K1Q6PFW1 1433 aa24.86■■□□□ 1.57
H3F3B-207ENST00000589417 BRD4O60885 1362 aaPredicted RBP24.85■■□□□ 1.57
H3F3B-207ENST00000589417 ADAMTS2O95450 1211 aa24.85■■□□□ 1.57
H3F3B-207ENST00000589417 FNBP4Q8N3X1 1017 aaPredicted RBP24.85■■□□□ 1.57
H3F3B-207ENST00000589417 TRPM3Q9HCF6 1732 aaPredicted RBP24.85■■□□□ 1.57
H3F3B-207ENST00000589417 TESK2Q96S53 571 aa24.84■■□□□ 1.57
H3F3B-207ENST00000589417 CABP1Q9NZU7 370 aa24.84■■□□□ 1.57
H3F3B-207ENST00000589417 AFF2P51816 1311 aa24.84■■□□□ 1.57
H3F3B-207ENST00000589417 ATAD2Q6PL18 1390 aa24.83■■□□□ 1.57
H3F3B-207ENST00000589417 C8orf37Q96NL8 207 aa24.83■■□□□ 1.57
H3F3B-207ENST00000589417 ST20-MTHFSA0A0A6YYL1 179 aa24.82■■□□□ 1.56
H3F3B-207ENST00000589417 NGLY1Q96IV0 654 aa24.82■■□□□ 1.56
H3F3B-207ENST00000589417 ALS2Q96Q42 1657 aa24.79■■□□□ 1.56
H3F3B-207ENST00000589417 SOCS7O14512 581 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms