RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 C8orf37Q96NL8 207 aa15.61■□□□□ 0.09
CLPTM1-211ENST00000589347 MYOM2P54296 1465 aa15.6■□□□□ 0.09
CLPTM1-211ENST00000589347 LRRC59Q96AG4 307 aaKnown RBP15.59■□□□□ 0.09
CLPTM1-211ENST00000589347 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
CLPTM1-211ENST00000589347 PIK3C2GO75747 1445 aa15.59■□□□□ 0.09
CLPTM1-211ENST00000589347 HRCP23327 699 aa15.58■□□□□ 0.08
CLPTM1-211ENST00000589347 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
CLPTM1-211ENST00000589347 NGLY1Q96IV0 654 aa15.57■□□□□ 0.08
CLPTM1-211ENST00000589347 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
CLPTM1-211ENST00000589347 LRP5O75197 1615 aa15.55■□□□□ 0.08
CLPTM1-211ENST00000589347 NRXN1Q9ULB1 1477 aa15.55■□□□□ 0.08
CLPTM1-211ENST00000589347 ATRNO75882 1429 aa15.55■□□□□ 0.08
CLPTM1-211ENST00000589347 ADGRF5Q8IZF2 1346 aa15.54■□□□□ 0.08
CLPTM1-211ENST00000589347 TECPR2O15040 1411 aa15.53■□□□□ 0.08
CLPTM1-211ENST00000589347 COL22A1Q8NFW1 1626 aaPredicted RBP15.53■□□□□ 0.08
CLPTM1-211ENST00000589347 ROBO2Q9HCK4 1378 aa15.52■□□□□ 0.08
CLPTM1-211ENST00000589347 LRPPRCP42704 1394 aaKnown RBP15.51■□□□□ 0.07
CLPTM1-211ENST00000589347 CCDC125Q86Z20 511 aa15.51■□□□□ 0.07
CLPTM1-211ENST00000589347 FNBP4Q8N3X1 1017 aaPredicted RBP15.51■□□□□ 0.07
CLPTM1-211ENST00000589347 FMN2Q9NZ56 1722 aa15.51■□□□□ 0.07
CLPTM1-211ENST00000589347 DDX17Q92841 729 aaKnown RBP15.5■□□□□ 0.07
CLPTM1-211ENST00000589347 TRPC5Q9UL62 973 aaPredicted RBP15.5■□□□□ 0.07
CLPTM1-211ENST00000589347 YTHDC2Q9H6S0 1430 aaKnown RBP15.5■□□□□ 0.07
CLPTM1-211ENST00000589347 KIF1AQ12756 1690 aa15.49■□□□□ 0.07
CLPTM1-211ENST00000589347 ADAMTS2O95450 1211 aa15.49■□□□□ 0.07
CLPTM1-211ENST00000589347 USP21Q9UK80 565 aa15.49■□□□□ 0.07
CLPTM1-211ENST00000589347 KIAA1210Q9ULL0 1709 aa15.48■□□□□ 0.07
CLPTM1-211ENST00000589347 C1orf167Q5SNV9 1468 aa15.48■□□□□ 0.07
CLPTM1-211ENST00000589347 SOS2Q07890 1332 aaPredicted RBP15.47■□□□□ 0.07
CLPTM1-211ENST00000589347 DHX57Q6P158 1386 aaKnown RBP15.47■□□□□ 0.07
CLPTM1-211ENST00000589347 ABCC11Q96J66 1382 aa15.47■□□□□ 0.07
CLPTM1-211ENST00000589347 BCL9LQ86UU0 1499 aa15.46■□□□□ 0.07
CLPTM1-211ENST00000589347 DLC1Q96QB1 1528 aa15.46■□□□□ 0.07
CLPTM1-211ENST00000589347 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.46■□□□□ 0.06
CLPTM1-211ENST00000589347 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
CLPTM1-211ENST00000589347 RGPD8O14715 1765 aaPredicted RBP15.45■□□□□ 0.06
CLPTM1-211ENST00000589347 STAC3Q96MF2 364 aa15.45■□□□□ 0.06
CLPTM1-211ENST00000589347 STK26Q9P289 416 aa15.45■□□□□ 0.06
CLPTM1-211ENST00000589347 ARHGEF28Q8N1W1 1705 aaKnown RBP15.45■□□□□ 0.06
CLPTM1-211ENST00000589347 MARF1Q9Y4F3 1742 aaKnown RBP15.45■□□□□ 0.06
CLPTM1-211ENST00000589347 C14orf93Q9H972 538 aaKnown RBP15.44■□□□□ 0.06
CLPTM1-211ENST00000589347 ADGRB2O60241 1585 aa15.44■□□□□ 0.06
CLPTM1-211ENST00000589347 ADGRB1O14514 1584 aa15.43■□□□□ 0.06
CLPTM1-211ENST00000589347 TMEM132EQ6IEE7 984 aa15.42■□□□□ 0.06
CLPTM1-211ENST00000589347 ITSN1Q15811 1721 aa15.41■□□□□ 0.06
CLPTM1-211ENST00000589347 GLI3P10071 1580 aa15.41■□□□□ 0.06
CLPTM1-211ENST00000589347 CFAP70Q5T0N1 1121 aa15.4■□□□□ 0.06
CLPTM1-211ENST00000589347 DCAF11Q8TEB1 546 aa15.4■□□□□ 0.06
CLPTM1-211ENST00000589347 SIRT1Q96EB6 747 aa15.39■□□□□ 0.05
CLPTM1-211ENST00000589347 PLEKHH1Q9ULM0 1364 aa15.38■□□□□ 0.05
CLPTM1-211ENST00000589347 WAPLQ7Z5K2 1190 aa15.38■□□□□ 0.05
CLPTM1-211ENST00000589347 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
CLPTM1-211ENST00000589347 PXDNQ92626 1479 aa15.38■□□□□ 0.05
CLPTM1-211ENST00000589347 GJD4Q96KN9 370 aaPredicted RBP15.37■□□□□ 0.05
CLPTM1-211ENST00000589347 RALGAPBQ86X10 1494 aa15.37■□□□□ 0.05
CLPTM1-211ENST00000589347 NPHP3Q7Z494 1330 aa15.37■□□□□ 0.05
CLPTM1-211ENST00000589347 EIF3AQ14152 1382 aaKnown RBP15.36■□□□□ 0.05
CLPTM1-211ENST00000589347 BRWD3Q6RI45 1802 aa15.36■□□□□ 0.05
CLPTM1-211ENST00000589347 ORAI2Q96SN7 254 aa15.36■□□□□ 0.05
CLPTM1-211ENST00000589347 SLIT2O94813 1529 aa15.36■□□□□ 0.05
CLPTM1-211ENST00000589347 ESCO1Q5FWF5 840 aa15.35■□□□□ 0.05
CLPTM1-211ENST00000589347 POGKQ9P215 609 aa15.35■□□□□ 0.05
CLPTM1-211ENST00000589347 DEFB132Q7Z7B7 95 aa15.34■□□□□ 0.05
CLPTM1-211ENST00000589347 PRAM1Q96QH2 718 aa15.34■□□□□ 0.05
CLPTM1-211ENST00000589347 USP32Q8NFA0 1604 aa15.34■□□□□ 0.05
CLPTM1-211ENST00000589347 ANKARQ7Z5J8 1434 aa15.34■□□□□ 0.05
CLPTM1-211ENST00000589347 TULP4Q9NRJ4 1543 aa15.33■□□□□ 0.04
CLPTM1-211ENST00000589347 TRPM1Q7Z4N2 1603 aa15.32■□□□□ 0.04
CLPTM1-211ENST00000589347 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
CLPTM1-211ENST00000589347 SAFB2Q14151 953 aaKnown RBP eCLIP15.31■□□□□ 0.04
CLPTM1-211ENST00000589347 TRAK1Q9UPV9 953 aa15.31■□□□□ 0.04
CLPTM1-211ENST00000589347 NUTM2FA1L443 756 aa15.3■□□□□ 0.04
CLPTM1-211ENST00000589347 ABCA3Q99758 1704 aa15.3■□□□□ 0.04
CLPTM1-211ENST00000589347 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
CLPTM1-211ENST00000589347 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
CLPTM1-211ENST00000589347 TRPM3Q9HCF6 1732 aaPredicted RBP15.27■□□□□ 0.04
CLPTM1-211ENST00000589347 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
CLPTM1-211ENST00000589347 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
CLPTM1-211ENST00000589347 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
CLPTM1-211ENST00000589347 TNS3Q68CZ2 1445 aa15.26■□□□□ 0.03
CLPTM1-211ENST00000589347 MINK1Q8N4C8 1332 aaPredicted RBP15.25■□□□□ 0.03
CLPTM1-211ENST00000589347 FOXO3O43524 673 aa15.25■□□□□ 0.03
CLPTM1-211ENST00000589347 PHF8Q9UPP1 1060 aa15.25■□□□□ 0.03
CLPTM1-211ENST00000589347 PLCH1Q4KWH8 1693 aa15.25■□□□□ 0.03
CLPTM1-211ENST00000589347 ALS2Q96Q42 1657 aa15.25■□□□□ 0.03
CLPTM1-211ENST00000589347 PSDA5PKW4 1024 aaPredicted RBP15.23■□□□□ 0.03
CLPTM1-211ENST00000589347 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
CLPTM1-211ENST00000589347 PSME1Q06323 249 aa15.23■□□□□ 0.03
CLPTM1-211ENST00000589347 SEPT12Q8IYM1 358 aa15.23■□□□□ 0.03
CLPTM1-211ENST00000589347 HIRIP3Q9BW71 556 aaPredicted RBP15.23■□□□□ 0.03
CLPTM1-211ENST00000589347 ATP7BP35670 1465 aa15.22■□□□□ 0.03
CLPTM1-211ENST00000589347 WASLO00401 505 aaPredicted RBP15.22■□□□□ 0.03
CLPTM1-211ENST00000589347 XPCQ01831 940 aaPredicted RBP15.22■□□□□ 0.03
CLPTM1-211ENST00000589347 SBNO1A3KN83 1393 aa15.22■□□□□ 0.03
CLPTM1-211ENST00000589347 ARHGEF10O15013 1369 aa15.22■□□□□ 0.03
CLPTM1-211ENST00000589347 DISP2A7MBM2 1401 aa15.21■□□□□ 0.03
CLPTM1-211ENST00000589347 VPS72Q15906 364 aa15.21■□□□□ 0.03
CLPTM1-211ENST00000589347 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.03
CLPTM1-211ENST00000589347 GPRASP1Q5JY77 1395 aa15.21■□□□□ 0.02
CLPTM1-211ENST00000589347 RGPD1P0DJD0 1748 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms