RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 PDCD7Q8N8D1 485 aaKnown RBP9.28□□□□□ -0.92
UCA1-202ENST00000589333 VASPP50552 380 aaPredicted RBP9.27□□□□□ -0.93
UCA1-202ENST00000589333 CEP170BQ9Y4F5 1589 aaPredicted RBP9.27□□□□□ -0.93
UCA1-202ENST00000589333 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.93
UCA1-202ENST00000589333 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
UCA1-202ENST00000589333 KLHL34Q8N239 644 aa9.26□□□□□ -0.93
UCA1-202ENST00000589333 NLRP1Q9C000 1473 aa9.26□□□□□ -0.93
UCA1-202ENST00000589333 PPLO60437 1756 aa9.25□□□□□ -0.93
UCA1-202ENST00000589333 CCDC144AA2RUR9 1427 aa9.25□□□□□ -0.93
UCA1-202ENST00000589333 SPATA31E1Q6ZUB1 1445 aa9.25□□□□□ -0.93
UCA1-202ENST00000589333 MARVELD3Q96A59 401 aa9.25□□□□□ -0.93
UCA1-202ENST00000589333 FBXO3Q9UK99 471 aa9.24□□□□□ -0.93
UCA1-202ENST00000589333 NEXMIFQ5QGS0 1516 aa9.24□□□□□ -0.93
UCA1-202ENST00000589333 TNRQ92752 1358 aa9.24□□□□□ -0.93
UCA1-202ENST00000589333 SOCS7O14512 581 aa9.23□□□□□ -0.93
UCA1-202ENST00000589333 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
UCA1-202ENST00000589333 A2ML1A8K2U0 1454 aa9.22□□□□□ -0.93
UCA1-202ENST00000589333 LMTK3Q96Q04 1460 aa9.22□□□□□ -0.93
UCA1-202ENST00000589333 SETD1BQ9UPS6 1966 aaKnown RBP9.21□□□□□ -0.93
UCA1-202ENST00000589333 CEBPAP49715 358 aaPredicted RBP9.21□□□□□ -0.94
UCA1-202ENST00000589333 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.94
UCA1-202ENST00000589333 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.21□□□□□ -0.94
UCA1-202ENST00000589333 MYOM2P54296 1465 aa9.21□□□□□ -0.94
UCA1-202ENST00000589333 SLIT1O75093 1534 aa9.21□□□□□ -0.94
UCA1-202ENST00000589333 POLR1AO95602 1720 aaPredicted RBP9.2□□□□□ -0.94
UCA1-202ENST00000589333 CCER1Q8TC90 406 aaPredicted RBP9.2□□□□□ -0.94
UCA1-202ENST00000589333 ZFYVE9O95405 1425 aa9.2□□□□□ -0.94
UCA1-202ENST00000589333 ARHGAP23Q9P227 1491 aa9.2□□□□□ -0.94
UCA1-202ENST00000589333 NRXN3Q9Y4C0 1643 aa9.2□□□□□ -0.94
UCA1-202ENST00000589333 SETD1AO15047 1707 aaKnown RBP9.19□□□□□ -0.94
UCA1-202ENST00000589333 DPY19L2Q6NUT2 758 aa9.19□□□□□ -0.94
UCA1-202ENST00000589333 NRXN1Q9ULB1 1477 aa9.19□□□□□ -0.94
UCA1-202ENST00000589333 PSEN1P49768 467 aa9.18□□□□□ -0.94
UCA1-202ENST00000589333 UHRF1BP1Q6BDS2 1440 aa9.18□□□□□ -0.94
UCA1-202ENST00000589333 SIN3AQ96ST3 1273 aa9.18□□□□□ -0.94
UCA1-202ENST00000589333 IQGAP1P46940 1657 aa9.17□□□□□ -0.94
UCA1-202ENST00000589333 TRPM1Q7Z4N2 1603 aa9.17□□□□□ -0.94
UCA1-202ENST00000589333 IDI1Q13907 227 aa9.17□□□□□ -0.94
UCA1-202ENST00000589333 GSE1Q14687 1217 aa9.17□□□□□ -0.94
UCA1-202ENST00000589333 ZNF467Q7Z7K2 595 aaPredicted RBP9.17□□□□□ -0.94
UCA1-202ENST00000589333 SLC52A1Q9NWF4 448 aa9.17□□□□□ -0.94
UCA1-202ENST00000589333 LAMC1P11047 1609 aa9.16□□□□□ -0.94
UCA1-202ENST00000589333 POTEB3A0JP26 581 aa9.16□□□□□ -0.94
UCA1-202ENST00000589333 POTEBQ6S5H4 581 aa9.16□□□□□ -0.94
UCA1-202ENST00000589333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.16□□□□□ -0.94
UCA1-202ENST00000589333 KIAA1210Q9ULL0 1709 aa9.16□□□□□ -0.94
UCA1-202ENST00000589333 SETBP1Q9Y6X0 1596 aa9.16□□□□□ -0.94
UCA1-202ENST00000589333 MKRN3Q13064 507 aaKnown RBP9.15□□□□□ -0.94
UCA1-202ENST00000589333 IFNLR1Q8IU57 520 aaPredicted RBP9.15□□□□□ -0.94
UCA1-202ENST00000589333 ASXL1Q8IXJ9 1541 aa9.15□□□□□ -0.95
UCA1-202ENST00000589333 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
UCA1-202ENST00000589333 PRAG1Q86YV5 1406 aa9.14□□□□□ -0.95
UCA1-202ENST00000589333 CHRM1P11229 460 aaPredicted RBP9.14□□□□□ -0.95
UCA1-202ENST00000589333 TONSLQ96HA7 1378 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 TMEM2Q9UHN6 1383 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 GOLGA2Q08379 1002 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 MMRN1Q13201 1228 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 C3orf67Q6ZVT6 689 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 SPNS2Q8IVW8 549 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 STRCQ7RTU9 1775 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 RIMS2Q9UQ26 1411 aa9.13□□□□□ -0.95
UCA1-202ENST00000589333 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
UCA1-202ENST00000589333 RALGAPBQ86X10 1494 aa9.12□□□□□ -0.95
UCA1-202ENST00000589333 SCAF11Q99590 1463 aaKnown RBP9.12□□□□□ -0.95
UCA1-202ENST00000589333 ADGRB1O14514 1584 aa9.12□□□□□ -0.95
UCA1-202ENST00000589333 DIP2AQ14689 1571 aa9.12□□□□□ -0.95
UCA1-202ENST00000589333 MED14O60244 1454 aa9.11□□□□□ -0.95
UCA1-202ENST00000589333 NEUROD1Q13562 356 aa9.11□□□□□ -0.95
UCA1-202ENST00000589333 L3MBTL2Q969R5 705 aa9.11□□□□□ -0.95
UCA1-202ENST00000589333 CABP2Q9NPB3 220 aa9.1□□□□□ -0.95
UCA1-202ENST00000589333 CIZ1Q9ULV3 898 aaPredicted RBP9.1□□□□□ -0.95
UCA1-202ENST00000589333 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
UCA1-202ENST00000589333 KNDC1Q76NI1 1749 aa9.1□□□□□ -0.95
UCA1-202ENST00000589333 ALKQ9UM73 1620 aa9.09□□□□□ -0.95
UCA1-202ENST00000589333 RPGRIP1LQ68CZ1 1315 aa9.09□□□□□ -0.95
UCA1-202ENST00000589333 XRN1Q8IZH2 1706 aaKnown RBP9.09□□□□□ -0.95
UCA1-202ENST00000589333 ADAMTS13Q76LX8 1427 aa9.09□□□□□ -0.95
UCA1-202ENST00000589333 SNPHO15079 494 aa9.09□□□□□ -0.95
UCA1-202ENST00000589333 PLEKHG1Q9ULL1 1385 aa9.09□□□□□ -0.95
UCA1-202ENST00000589333 NWD1Q149M9 1564 aa9.08□□□□□ -0.96
UCA1-202ENST00000589333 EMP3P54852 163 aa9.08□□□□□ -0.96
UCA1-202ENST00000589333 PDAP1Q13442 181 aaKnown RBP9.08□□□□□ -0.96
UCA1-202ENST00000589333 L3MBTL3Q96JM7 780 aaPredicted RBP9.08□□□□□ -0.96
UCA1-202ENST00000589333 ARHGEF28Q8N1W1 1705 aaKnown RBP9.08□□□□□ -0.96
UCA1-202ENST00000589333 ADGRF5Q8IZF2 1346 aa9.07□□□□□ -0.96
UCA1-202ENST00000589333 CHGAP10645 457 aaKnown RBP9.07□□□□□ -0.96
UCA1-202ENST00000589333 RGL3Q3MIN7 710 aa9.07□□□□□ -0.96
UCA1-202ENST00000589333 GPRASP1Q5JY77 1395 aa9.07□□□□□ -0.96
UCA1-202ENST00000589333 CPS1P31327 1500 aa9.06□□□□□ -0.96
UCA1-202ENST00000589333 LTKP29376 864 aa9.06□□□□□ -0.96
UCA1-202ENST00000589333 NBPF8Q3BBV2 869 aa9.06□□□□□ -0.96
UCA1-202ENST00000589333 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
UCA1-202ENST00000589333 SPOCK2Q92563 424 aa9.06□□□□□ -0.96
UCA1-202ENST00000589333 KRTAP3-3Q9BYR6 98 aa9.06□□□□□ -0.96
UCA1-202ENST00000589333 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
UCA1-202ENST00000589333 FAM205CA6NFA0 338 aa9.05□□□□□ -0.96
UCA1-202ENST00000589333 PPP1R15AO75807 674 aaPredicted RBP9.05□□□□□ -0.96
UCA1-202ENST00000589333 ZNF326Q5BKZ1 582 aaKnown RBP9.05□□□□□ -0.96
UCA1-202ENST00000589333 DCAF11Q8TEB1 546 aa9.05□□□□□ -0.96
UCA1-202ENST00000589333 STAC3Q96MF2 364 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms