RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
DNMT1-218ENST00000589294 ARHGEF28Q8N1W1 1705 aaKnown RBP17.08■□□□□ 0.32
DNMT1-218ENST00000589294 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
DNMT1-218ENST00000589294 TESK2Q96S53 571 aa17.08■□□□□ 0.32
DNMT1-218ENST00000589294 MINK1Q8N4C8 1332 aaPredicted RBP17.07■□□□□ 0.32
DNMT1-218ENST00000589294 MSH6P52701 1360 aa17.06■□□□□ 0.32
DNMT1-218ENST00000589294 CERKQ8TCT0 537 aa17.06■□□□□ 0.32
DNMT1-218ENST00000589294 ADGRL3Q9HAR2 1447 aa17.05■□□□□ 0.32
DNMT1-218ENST00000589294 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
DNMT1-218ENST00000589294 WASLO00401 505 aaPredicted RBP17.05■□□□□ 0.32
DNMT1-218ENST00000589294 ATF3P18847 181 aa17.05■□□□□ 0.32
DNMT1-218ENST00000589294 CADPS2Q86UW7 1296 aa17.05■□□□□ 0.32
DNMT1-218ENST00000589294 PUS7Q96PZ0 661 aaKnown RBP17.04■□□□□ 0.32
DNMT1-218ENST00000589294 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
DNMT1-218ENST00000589294 TMF1P82094 1093 aa17.03■□□□□ 0.32
DNMT1-218ENST00000589294 CDK19Q9BWU1 502 aa17.03■□□□□ 0.32
DNMT1-218ENST00000589294 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.03■□□□□ 0.32
DNMT1-218ENST00000589294 IQSEC2Q5JU85 1478 aa17.03■□□□□ 0.32
DNMT1-218ENST00000589294 DCCP43146 1447 aa17.03■□□□□ 0.32
DNMT1-218ENST00000589294 CDCA8Q53HL2 280 aa17.02■□□□□ 0.32
DNMT1-218ENST00000589294 XIRP1Q702N8 1843 aaKnown RBP17■□□□□ 0.31
DNMT1-218ENST00000589294 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
DNMT1-218ENST00000589294 ADGRB2O60241 1585 aa16.99■□□□□ 0.31
DNMT1-218ENST00000589294 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
DNMT1-218ENST00000589294 TOM1O60784 492 aa16.98■□□□□ 0.31
DNMT1-218ENST00000589294 SRPK2P78362 688 aaKnown RBP16.98■□□□□ 0.31
DNMT1-218ENST00000589294 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
DNMT1-218ENST00000589294 NALCNQ8IZF0 1738 aa16.97■□□□□ 0.31
DNMT1-218ENST00000589294 NUDT16Q96DE0 195 aaKnown RBP16.97■□□□□ 0.31
DNMT1-218ENST00000589294 CABP2Q9NPB3 220 aa16.96■□□□□ 0.31
DNMT1-218ENST00000589294 CCDC61Q9Y6R9 512 aa16.96■□□□□ 0.31
DNMT1-218ENST00000589294 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
DNMT1-218ENST00000589294 TULP4Q9NRJ4 1543 aa16.94■□□□□ 0.3
DNMT1-218ENST00000589294 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
DNMT1-218ENST00000589294 DISP3Q9P2K9 1392 aa16.93■□□□□ 0.3
DNMT1-218ENST00000589294 NUTM2FA1L443 756 aa16.93■□□□□ 0.3
DNMT1-218ENST00000589294 C11orf95C9JLR9 678 aaPredicted RBP16.93■□□□□ 0.3
DNMT1-218ENST00000589294 UBAP1LF5GYI3 381 aa16.93■□□□□ 0.3
DNMT1-218ENST00000589294 MST1RQ04912 1400 aa16.93■□□□□ 0.3
DNMT1-218ENST00000589294 C1orf167Q5SNV9 1468 aa16.93■□□□□ 0.3
DNMT1-218ENST00000589294 PRR36Q9H6K5 1346 aa16.92■□□□□ 0.3
DNMT1-218ENST00000589294 PLEKHG3A1L390 1219 aa16.91■□□□□ 0.3
DNMT1-218ENST00000589294 ESCO1Q5FWF5 840 aa16.91■□□□□ 0.3
DNMT1-218ENST00000589294 FMN2Q9NZ56 1722 aa16.9■□□□□ 0.3
DNMT1-218ENST00000589294 ORAI2Q96SN7 254 aa16.89■□□□□ 0.29
DNMT1-218ENST00000589294 CABP1Q9NZU7 370 aa16.89■□□□□ 0.29
DNMT1-218ENST00000589294 PHF8Q9UPP1 1060 aa16.89■□□□□ 0.29
DNMT1-218ENST00000589294 KIF7Q2M1P5 1343 aa16.89■□□□□ 0.29
DNMT1-218ENST00000589294 NINLQ9Y2I6 1382 aa16.89■□□□□ 0.29
DNMT1-218ENST00000589294 ATP7BP35670 1465 aa16.88■□□□□ 0.29
DNMT1-218ENST00000589294 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
DNMT1-218ENST00000589294 TMC1Q8TDI8 760 aa16.88■□□□□ 0.29
DNMT1-218ENST00000589294 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
DNMT1-218ENST00000589294 SLC12A5Q9H2X9 1139 aa16.87■□□□□ 0.29
DNMT1-218ENST00000589294 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
DNMT1-218ENST00000589294 CCDC7Q96M83 1385 aa16.87■□□□□ 0.29
DNMT1-218ENST00000589294 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
DNMT1-218ENST00000589294 ZNF692Q9BU19 519 aaPredicted RBP16.86■□□□□ 0.29
DNMT1-218ENST00000589294 PPIP5K1Q6PFW1 1433 aa16.86■□□□□ 0.29
DNMT1-218ENST00000589294 PIP4K2BP78356 416 aa16.85■□□□□ 0.29
DNMT1-218ENST00000589294 NGDNQ8NEJ9 315 aaKnown RBP16.85■□□□□ 0.29
DNMT1-218ENST00000589294 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
DNMT1-218ENST00000589294 TERF2IPQ9NYB0 399 aa16.85■□□□□ 0.29
DNMT1-218ENST00000589294 USP32Q8NFA0 1604 aa16.85■□□□□ 0.29
DNMT1-218ENST00000589294 POLR3AO14802 1390 aaPredicted RBP16.83■□□□□ 0.28
DNMT1-218ENST00000589294 FOXO3O43524 673 aa16.83■□□□□ 0.28
DNMT1-218ENST00000589294 ACEP12821 1306 aa16.83■□□□□ 0.28
DNMT1-218ENST00000589294 PSME1Q06323 249 aa16.83■□□□□ 0.28
DNMT1-218ENST00000589294 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
DNMT1-218ENST00000589294 HDGFL2Q7Z4V5 671 aaPredicted RBP16.82■□□□□ 0.28
DNMT1-218ENST00000589294 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
DNMT1-218ENST00000589294 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
DNMT1-218ENST00000589294 ITSN1Q15811 1721 aa16.8■□□□□ 0.28
DNMT1-218ENST00000589294 CPSF1Q10570 1443 aaKnown RBP16.79■□□□□ 0.28
DNMT1-218ENST00000589294 BRD4O60885 1362 aaPredicted RBP16.79■□□□□ 0.28
DNMT1-218ENST00000589294 TOPAZ1Q8N9V7 1692 aa16.79■□□□□ 0.28
DNMT1-218ENST00000589294 KRT28Q7Z3Y7 464 aa16.79■□□□□ 0.28
DNMT1-218ENST00000589294 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
DNMT1-218ENST00000589294 ANKRD36BQ8N2N9 1353 aa16.78■□□□□ 0.28
DNMT1-218ENST00000589294 FBXO41Q8TF61 875 aa16.78■□□□□ 0.28
DNMT1-218ENST00000589294 PANK3Q9H999 370 aa16.78■□□□□ 0.28
DNMT1-218ENST00000589294 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
DNMT1-218ENST00000589294 KTN1Q86UP2 1357 aaKnown RBP16.77■□□□□ 0.27
DNMT1-218ENST00000589294 ROBO1Q9Y6N7 1651 aa16.76■□□□□ 0.27
DNMT1-218ENST00000589294 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
DNMT1-218ENST00000589294 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
DNMT1-218ENST00000589294 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
DNMT1-218ENST00000589294 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
DNMT1-218ENST00000589294 USP6P35125 1406 aa16.74■□□□□ 0.27
DNMT1-218ENST00000589294 LRRC59Q96AG4 307 aaKnown RBP16.74■□□□□ 0.27
DNMT1-218ENST00000589294 SBNO1A3KN83 1393 aa16.74■□□□□ 0.27
DNMT1-218ENST00000589294 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
DNMT1-218ENST00000589294 XPCQ01831 940 aaPredicted RBP16.73■□□□□ 0.27
DNMT1-218ENST00000589294 DDX10Q13206 875 aaKnown RBP16.73■□□□□ 0.27
DNMT1-218ENST00000589294 TTC21BQ7Z4L5 1316 aa16.72■□□□□ 0.27
DNMT1-218ENST00000589294 TTC21AQ8NDW8 1320 aa16.72■□□□□ 0.27
DNMT1-218ENST00000589294 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
DNMT1-218ENST00000589294 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-218ENST00000589294 PER1O15534 1290 aaPredicted RBP16.72■□□□□ 0.27
DNMT1-218ENST00000589294 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms