RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 ATF3P18847 181 aa20.62■□□□□ 0.89
CNN1-208ENST00000588935 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
CNN1-208ENST00000588935 CENPJQ9HC77 1338 aaPredicted RBP20.61■□□□□ 0.89
CNN1-208ENST00000588935 SCAF1Q9H7N4 1312 aaKnown RBP20.6■□□□□ 0.89
CNN1-208ENST00000588935 PIP4K2BP78356 416 aa20.59■□□□□ 0.89
CNN1-208ENST00000588935 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.89
CNN1-208ENST00000588935 ST20-MTHFSA0A0A6YYL1 179 aa20.58■□□□□ 0.89
CNN1-208ENST00000588935 ADGRL3Q9HAR2 1447 aa20.58■□□□□ 0.88
CNN1-208ENST00000588935 NCOA3Q9Y6Q9 1424 aa20.58■□□□□ 0.88
CNN1-208ENST00000588935 EIF3AQ14152 1382 aaKnown RBP20.58■□□□□ 0.88
CNN1-208ENST00000588935 TOM1O60784 492 aa20.57■□□□□ 0.88
CNN1-208ENST00000588935 ZEB1P37275 1124 aaPredicted RBP20.57■□□□□ 0.88
CNN1-208ENST00000588935 USP47Q96K76 1375 aa20.57■□□□□ 0.88
CNN1-208ENST00000588935 CADPS2Q86UW7 1296 aa20.56■□□□□ 0.88
CNN1-208ENST00000588935 QRICH2Q9H0J4 1663 aa20.54■□□□□ 0.88
CNN1-208ENST00000588935 HSPA5P11021 654 aaKnown RBP20.54■□□□□ 0.88
CNN1-208ENST00000588935 SLAIN2Q9P270 581 aa20.54■□□□□ 0.88
CNN1-208ENST00000588935 EIF4G2P78344 907 aaKnown RBP eCLIP20.53■□□□□ 0.88
CNN1-208ENST00000588935 CDK19Q9BWU1 502 aa20.53■□□□□ 0.88
CNN1-208ENST00000588935 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
CNN1-208ENST00000588935 WASLO00401 505 aaPredicted RBP20.52■□□□□ 0.88
CNN1-208ENST00000588935 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
CNN1-208ENST00000588935 CABP2Q9NPB3 220 aa20.5■□□□□ 0.87
CNN1-208ENST00000588935 ESCO1Q5FWF5 840 aa20.48■□□□□ 0.87
CNN1-208ENST00000588935 ORAI2Q96SN7 254 aa20.48■□□□□ 0.87
CNN1-208ENST00000588935 RGPD8O14715 1765 aaPredicted RBP20.47■□□□□ 0.87
CNN1-208ENST00000588935 EVC2Q86UK5 1308 aa20.47■□□□□ 0.87
CNN1-208ENST00000588935 DCCP43146 1447 aa20.46■□□□□ 0.87
CNN1-208ENST00000588935 MST1RQ04912 1400 aa20.46■□□□□ 0.87
CNN1-208ENST00000588935 TESK2Q96S53 571 aa20.46■□□□□ 0.87
CNN1-208ENST00000588935 CDC42BPGQ6DT37 1551 aa20.46■□□□□ 0.87
CNN1-208ENST00000588935 FMN2Q9NZ56 1722 aa20.45■□□□□ 0.86
CNN1-208ENST00000588935 NUDT16Q96DE0 195 aaKnown RBP20.45■□□□□ 0.86
CNN1-208ENST00000588935 POLR3GLQ9BT43 218 aa20.45■□□□□ 0.86
CNN1-208ENST00000588935 C1orf167Q5SNV9 1468 aa20.44■□□□□ 0.86
CNN1-208ENST00000588935 PRR36Q9H6K5 1346 aa20.44■□□□□ 0.86
CNN1-208ENST00000588935 PMFBP1Q8TBY8 1022 aa20.43■□□□□ 0.86
CNN1-208ENST00000588935 FBXO41Q8TF61 875 aa20.43■□□□□ 0.86
CNN1-208ENST00000588935 DDX17Q92841 729 aaKnown RBP20.43■□□□□ 0.86
CNN1-208ENST00000588935 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
CNN1-208ENST00000588935 TMF1P82094 1093 aa20.42■□□□□ 0.86
CNN1-208ENST00000588935 BRINP3Q76B58 766 aa20.42■□□□□ 0.86
CNN1-208ENST00000588935 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
CNN1-208ENST00000588935 DISP3Q9P2K9 1392 aa20.39■□□□□ 0.85
CNN1-208ENST00000588935 PHF8Q9UPP1 1060 aa20.39■□□□□ 0.85
CNN1-208ENST00000588935 ROBO1Q9Y6N7 1651 aa20.38■□□□□ 0.85
CNN1-208ENST00000588935 SBNO2Q9Y2G9 1366 aa20.38■□□□□ 0.85
CNN1-208ENST00000588935 FOXO3O43524 673 aa20.38■□□□□ 0.85
CNN1-208ENST00000588935 XPCQ01831 940 aaPredicted RBP20.38■□□□□ 0.85
CNN1-208ENST00000588935 TMC1Q8TDI8 760 aa20.38■□□□□ 0.85
CNN1-208ENST00000588935 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
CNN1-208ENST00000588935 CABP1Q9NZU7 370 aa20.37■□□□□ 0.85
CNN1-208ENST00000588935 CCDC61Q9Y6R9 512 aa20.37■□□□□ 0.85
CNN1-208ENST00000588935 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
CNN1-208ENST00000588935 NGDNQ8NEJ9 315 aaKnown RBP20.36■□□□□ 0.85
CNN1-208ENST00000588935 ANKARQ7Z5J8 1434 aa20.36■□□□□ 0.85
CNN1-208ENST00000588935 C11orf95C9JLR9 678 aaPredicted RBP20.35■□□□□ 0.85
CNN1-208ENST00000588935 HSPA1LP34931 641 aa20.34■□□□□ 0.85
CNN1-208ENST00000588935 ATP7BP35670 1465 aa20.34■□□□□ 0.85
CNN1-208ENST00000588935 PSME1Q06323 249 aa20.33■□□□□ 0.85
CNN1-208ENST00000588935 SLC12A5Q9H2X9 1139 aa20.33■□□□□ 0.85
CNN1-208ENST00000588935 PPIP5K1Q6PFW1 1433 aa20.33■□□□□ 0.84
CNN1-208ENST00000588935 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
CNN1-208ENST00000588935 ILDR1Q86SU0 546 aaPredicted RBP20.32■□□□□ 0.84
CNN1-208ENST00000588935 ACEP12821 1306 aa20.3■□□□□ 0.84
CNN1-208ENST00000588935 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
CNN1-208ENST00000588935 ATAD2Q6PL18 1390 aa20.3■□□□□ 0.84
CNN1-208ENST00000588935 ITSN1Q15811 1721 aa20.3■□□□□ 0.84
CNN1-208ENST00000588935 PLEKHG3A1L390 1219 aa20.29■□□□□ 0.84
CNN1-208ENST00000588935 PHLPP1O60346 1717 aa20.28■□□□□ 0.84
CNN1-208ENST00000588935 PLEKHG5O94827 1062 aa20.28■□□□□ 0.84
CNN1-208ENST00000588935 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.84
CNN1-208ENST00000588935 PAK3O75914 559 aaPredicted RBP20.27■□□□□ 0.84
CNN1-208ENST00000588935 LMOD2Q6P5Q4 547 aa20.27■□□□□ 0.84
CNN1-208ENST00000588935 PUS7Q96PZ0 661 aaKnown RBP20.27■□□□□ 0.84
CNN1-208ENST00000588935 KIF1AQ12756 1690 aa20.26■□□□□ 0.83
CNN1-208ENST00000588935 TOPAZ1Q8N9V7 1692 aa20.26■□□□□ 0.83
CNN1-208ENST00000588935 KIF7Q2M1P5 1343 aa20.25■□□□□ 0.83
CNN1-208ENST00000588935 NHSL1Q5SYE7 1610 aa20.24■□□□□ 0.83
CNN1-208ENST00000588935 HDGFL2Q7Z4V5 671 aaPredicted RBP20.23■□□□□ 0.83
CNN1-208ENST00000588935 SOS2Q07890 1332 aaPredicted RBP20.22■□□□□ 0.83
CNN1-208ENST00000588935 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
CNN1-208ENST00000588935 LRRC59Q96AG4 307 aaKnown RBP20.21■□□□□ 0.83
CNN1-208ENST00000588935 TERF2IPQ9NYB0 399 aa20.21■□□□□ 0.83
CNN1-208ENST00000588935 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
CNN1-208ENST00000588935 NUTM2GQ5VZR2 741 aa20.2■□□□□ 0.82
CNN1-208ENST00000588935 ZNF692Q9BU19 519 aaPredicted RBP20.2■□□□□ 0.82
CNN1-208ENST00000588935 WASHC2AQ641Q2 1341 aa20.2■□□□□ 0.82
CNN1-208ENST00000588935 KTN1Q86UP2 1357 aaKnown RBP20.2■□□□□ 0.82
CNN1-208ENST00000588935 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
CNN1-208ENST00000588935 PXDNQ92626 1479 aa20.19■□□□□ 0.82
CNN1-208ENST00000588935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.19■□□□□ 0.82
CNN1-208ENST00000588935 COL16A1Q07092 1604 aaPredicted RBP20.17■□□□□ 0.82
CNN1-208ENST00000588935 PANK3Q9H999 370 aa20.17■□□□□ 0.82
CNN1-208ENST00000588935 AKAP12Q02952 1782 aa20.16■□□□□ 0.82
CNN1-208ENST00000588935 SPATA31A3Q5VYP0 1347 aa20.16■□□□□ 0.82
CNN1-208ENST00000588935 A0A1W2PP64 1363 aa20.16■□□□□ 0.82
CNN1-208ENST00000588935 CD163L1Q9NR16 1453 aa20.16■□□□□ 0.82
CNN1-208ENST00000588935 NUTM2BA6NNL0 878 aaPredicted RBP20.15■□□□□ 0.82
CNN1-208ENST00000588935 NUTM2EB1AL46 878 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms