RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
NPC1-207ENST00000588867 FAM135BQ49AJ0 1406 aa20.13■□□□□ 0.81
NPC1-207ENST00000588867 AEBP2Q6ZN18 517 aaPredicted RBP20.11■□□□□ 0.81
NPC1-207ENST00000588867 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
NPC1-207ENST00000588867 XRN1Q8IZH2 1706 aaKnown RBP20.1■□□□□ 0.81
NPC1-207ENST00000588867 PTCH1Q13635 1447 aa20.08■□□□□ 0.81
NPC1-207ENST00000588867 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
NPC1-207ENST00000588867 CABP2Q9NPB3 220 aa20.07■□□□□ 0.8
NPC1-207ENST00000588867 DMRT2Q9Y5R5 561 aa20.07■□□□□ 0.8
NPC1-207ENST00000588867 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
NPC1-207ENST00000588867 CDK19Q9BWU1 502 aa20.06■□□□□ 0.8
NPC1-207ENST00000588867 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
NPC1-207ENST00000588867 PROSER2Q86WR7 435 aaPredicted RBP20.03■□□□□ 0.8
NPC1-207ENST00000588867 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.03■□□□□ 0.8
NPC1-207ENST00000588867 WASLO00401 505 aaPredicted RBP20.03■□□□□ 0.8
NPC1-207ENST00000588867 NWD1Q149M9 1564 aa20.02■□□□□ 0.79
NPC1-207ENST00000588867 TMC1Q8TDI8 760 aa20.02■□□□□ 0.79
NPC1-207ENST00000588867 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
NPC1-207ENST00000588867 PUS7Q96PZ0 661 aaKnown RBP20■□□□□ 0.79
NPC1-207ENST00000588867 STRCP1A6NGW2 1772 aa19.99■□□□□ 0.79
NPC1-207ENST00000588867 ZNF335Q9H4Z2 1342 aaPredicted RBP19.98■□□□□ 0.79
NPC1-207ENST00000588867 PANK3Q9H999 370 aa19.98■□□□□ 0.79
NPC1-207ENST00000588867 NKTRP30414 1462 aaKnown RBP19.97■□□□□ 0.79
NPC1-207ENST00000588867 NUTM2FA1L443 756 aa19.97■□□□□ 0.79
NPC1-207ENST00000588867 SLC12A5Q9H2X9 1139 aa19.97■□□□□ 0.79
NPC1-207ENST00000588867 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
NPC1-207ENST00000588867 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
NPC1-207ENST00000588867 NUDT16Q96DE0 195 aaKnown RBP19.95■□□□□ 0.78
NPC1-207ENST00000588867 MYOM1P52179 1685 aa19.94■□□□□ 0.78
NPC1-207ENST00000588867 CABP1Q9NZU7 370 aa19.93■□□□□ 0.78
NPC1-207ENST00000588867 NALCNQ8IZF0 1738 aa19.93■□□□□ 0.78
NPC1-207ENST00000588867 TMEM94Q12767 1356 aa19.93■□□□□ 0.78
NPC1-207ENST00000588867 CNGB1Q14028 1251 aaPredicted RBP19.92■□□□□ 0.78
NPC1-207ENST00000588867 ADGRL3Q9HAR2 1447 aa19.92■□□□□ 0.78
NPC1-207ENST00000588867 CCDC61Q9Y6R9 512 aa19.91■□□□□ 0.78
NPC1-207ENST00000588867 PRR36Q9H6K5 1346 aa19.9■□□□□ 0.78
NPC1-207ENST00000588867 ANP32CO43423 234 aa19.9■□□□□ 0.78
NPC1-207ENST00000588867 MIER1Q8N108 512 aa19.89■□□□□ 0.77
NPC1-207ENST00000588867 C19orf44Q9H6X5 657 aa19.89■□□□□ 0.77
NPC1-207ENST00000588867 NINLQ9Y2I6 1382 aa19.89■□□□□ 0.77
NPC1-207ENST00000588867 PPIP5K1Q6PFW1 1433 aa19.88■□□□□ 0.77
NPC1-207ENST00000588867 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
NPC1-207ENST00000588867 KNSTRNQ9Y448 316 aa19.88■□□□□ 0.77
NPC1-207ENST00000588867 TERF2IPQ9NYB0 399 aa19.87■□□□□ 0.77
NPC1-207ENST00000588867 ATP7BP35670 1465 aa19.87■□□□□ 0.77
NPC1-207ENST00000588867 CARD14Q9BXL6 1004 aa19.86■□□□□ 0.77
NPC1-207ENST00000588867 CDC42BPGQ6DT37 1551 aa19.86■□□□□ 0.77
NPC1-207ENST00000588867 HDGFL2Q7Z4V5 671 aaPredicted RBP19.86■□□□□ 0.77
NPC1-207ENST00000588867 NCOA3Q9Y6Q9 1424 aa19.86■□□□□ 0.77
NPC1-207ENST00000588867 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
NPC1-207ENST00000588867 FMN2Q9NZ56 1722 aa19.85■□□□□ 0.77
NPC1-207ENST00000588867 ATF3P18847 181 aa19.85■□□□□ 0.77
NPC1-207ENST00000588867 ANKRD36BQ8N2N9 1353 aa19.85■□□□□ 0.77
NPC1-207ENST00000588867 RGPD8O14715 1765 aaPredicted RBP19.85■□□□□ 0.77
NPC1-207ENST00000588867 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
NPC1-207ENST00000588867 A0A1W2PP64 1363 aa19.83■□□□□ 0.77
NPC1-207ENST00000588867 MSH6P52701 1360 aa19.83■□□□□ 0.77
NPC1-207ENST00000588867 PMFBP1Q8TBY8 1022 aa19.83■□□□□ 0.76
NPC1-207ENST00000588867 XIRP1Q702N8 1843 aaKnown RBP19.83■□□□□ 0.76
NPC1-207ENST00000588867 ANKARQ7Z5J8 1434 aa19.82■□□□□ 0.76
NPC1-207ENST00000588867 CC2D1BQ5T0F9 858 aaKnown RBP19.82■□□□□ 0.76
NPC1-207ENST00000588867 NSD3Q9BZ95 1437 aa19.81■□□□□ 0.76
NPC1-207ENST00000588867 CD163L1Q9NR16 1453 aa19.81■□□□□ 0.76
NPC1-207ENST00000588867 PLEKHG3A1L390 1219 aa19.81■□□□□ 0.76
NPC1-207ENST00000588867 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
NPC1-207ENST00000588867 CADPS2Q86UW7 1296 aa19.8■□□□□ 0.76
NPC1-207ENST00000588867 ACEP12821 1306 aa19.8■□□□□ 0.76
NPC1-207ENST00000588867 TOPAZ1Q8N9V7 1692 aa19.8■□□□□ 0.76
NPC1-207ENST00000588867 ITSN1Q15811 1721 aa19.8■□□□□ 0.76
NPC1-207ENST00000588867 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
NPC1-207ENST00000588867 PRKRIP1Q9H875 184 aaPredicted RBP19.79■□□□□ 0.76
NPC1-207ENST00000588867 KTN1Q86UP2 1357 aaKnown RBP19.79■□□□□ 0.76
NPC1-207ENST00000588867 AMER1Q5JTC6 1135 aaPredicted RBP19.78■□□□□ 0.76
NPC1-207ENST00000588867 ZNF692Q9BU19 519 aaPredicted RBP19.78■□□□□ 0.76
NPC1-207ENST00000588867 PHF8Q9UPP1 1060 aa19.78■□□□□ 0.76
NPC1-207ENST00000588867 DCCP43146 1447 aa19.77■□□□□ 0.76
NPC1-207ENST00000588867 CPSF1Q10570 1443 aaKnown RBP19.77■□□□□ 0.76
NPC1-207ENST00000588867 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
NPC1-207ENST00000588867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.76■□□□□ 0.75
NPC1-207ENST00000588867 CGNL1Q0VF96 1302 aa19.76■□□□□ 0.75
NPC1-207ENST00000588867 LTBP4Q8N2S1 1624 aa19.75■□□□□ 0.75
NPC1-207ENST00000588867 C1orf167Q5SNV9 1468 aa19.75■□□□□ 0.75
NPC1-207ENST00000588867 MST1RQ04912 1400 aa19.73■□□□□ 0.75
NPC1-207ENST00000588867 AKAP12Q02952 1782 aa19.73■□□□□ 0.75
NPC1-207ENST00000588867 RALBP1Q15311 655 aa19.73■□□□□ 0.75
NPC1-207ENST00000588867 POLR3AO14802 1390 aaPredicted RBP19.72■□□□□ 0.75
NPC1-207ENST00000588867 EDC4Q6P2E9 1401 aaKnown RBP19.71■□□□□ 0.75
NPC1-207ENST00000588867 NPC1L1Q9UHC9 1359 aa19.71■□□□□ 0.75
NPC1-207ENST00000588867 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
NPC1-207ENST00000588867 MON2Q7Z3U7 1717 aa19.7■□□□□ 0.74
NPC1-207ENST00000588867 FYB1O15117 783 aa19.7■□□□□ 0.74
NPC1-207ENST00000588867 FOXO3O43524 673 aa19.7■□□□□ 0.74
NPC1-207ENST00000588867 PSME1Q06323 249 aa19.7■□□□□ 0.74
NPC1-207ENST00000588867 GGNBP2Q9H3C7 697 aa19.7■□□□□ 0.74
NPC1-207ENST00000588867 USP6P35125 1406 aa19.69■□□□□ 0.74
NPC1-207ENST00000588867 MORC1Q86VD1 984 aa19.69■□□□□ 0.74
NPC1-207ENST00000588867 PARD3Q8TEW0 1356 aa19.69■□□□□ 0.74
NPC1-207ENST00000588867 TTC21BQ7Z4L5 1316 aa19.68■□□□□ 0.74
NPC1-207ENST00000588867 PAK3O75914 559 aaPredicted RBP19.67■□□□□ 0.74
NPC1-207ENST00000588867 NME9Q86XW9 330 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms